RNA–Protein interactions for RNA: ENST00000337318.7

FAM53B-202, Transcript of family with sequence similarity 53 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM53B, Length 5,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53B-202ENST00000337318 HIST1H2BDP58876 126 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 HIST1H2BCP62807 126 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 MRPL23Q16540 153 aaKnown RBP12.34□□□□□ -0.43
FAM53B-202ENST00000337318 HIST2H2BEQ16778 126 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.34□□□□□ -0.43
FAM53B-202ENST00000337318 HIST1H2BHQ93079 126 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 HIST1H2BNQ99877 126 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 HIST1H2BMQ99879 126 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 PCNX1Q96RV3 2341 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 ZNF491Q8N8L2 437 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 NOTCH4Q99466 2003 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 YLPM1P49750 1951 aaKnown RBP12.34□□□□□ -0.43
FAM53B-202ENST00000337318 SDHAF1A6NFY7 115 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 ORAOV1Q8WV07 137 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 C8orf49Q96NF6 230 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 ICOSQ9Y6W8 199 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 IGHV7-81A0A0B4J1V7 117 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 TP53TG1Q9Y2A0 90 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 ZGRF1Q86YA3 2104 aa12.34□□□□□ -0.43
FAM53B-202ENST00000337318 RBAKDNA6NC62 111 aa12.33□□□□□ -0.43
FAM53B-202ENST00000337318 SEM1Q6ZVN7 128 aa12.33□□□□□ -0.43
FAM53B-202ENST00000337318 TMEM95Q3KNT9 176 aa12.33□□□□□ -0.44
FAM53B-202ENST00000337318 KIAA2026Q5HYC2 2103 aa12.33□□□□□ -0.44
FAM53B-202ENST00000337318 IGLC7A0M8Q6 106 aa12.33□□□□□ -0.44
FAM53B-202ENST00000337318 NOP10Q9NPE3 64 aaKnown RBP12.33□□□□□ -0.44
FAM53B-202ENST00000337318 VOPP1Q96AW1 172 aa12.33□□□□□ -0.44
FAM53B-202ENST00000337318 Q8N8P6 123 aa12.32□□□□□ -0.44
FAM53B-202ENST00000337318 ZNF114Q8NC26 417 aa12.32□□□□□ -0.44
FAM53B-202ENST00000337318 C4orf3Q8WVX3 66 aa12.32□□□□□ -0.44
FAM53B-202ENST00000337318 TMEM126AQ9H061 195 aa12.32□□□□□ -0.44
FAM53B-202ENST00000337318 IGKV2D-24A0A075B6R9 120 aa12.32□□□□□ -0.44
FAM53B-202ENST00000337318 C5orf56Q8N8D9 126 aa12.32□□□□□ -0.44
FAM53B-202ENST00000337318 BLCAPP62952 87 aa12.32□□□□□ -0.44
FAM53B-202ENST00000337318 KRTAP27-1Q3LI81 207 aa12.32□□□□□ -0.44
FAM53B-202ENST00000337318 FAM104BQ5XKR9 115 aa12.32□□□□□ -0.44
FAM53B-202ENST00000337318 ZNF48Q96MX3 618 aaPredicted RBP12.32□□□□□ -0.44
FAM53B-202ENST00000337318 DOCK10Q96BY6 2186 aa12.32□□□□□ -0.44
FAM53B-202ENST00000337318 IGKV1-39P01597 117 aa12.32□□□□□ -0.44
FAM53B-202ENST00000337318 IGKV1D-39P04432 117 aa12.32□□□□□ -0.44
FAM53B-202ENST00000337318 C1orf43Q9BWL3 253 aa12.32□□□□□ -0.44
FAM53B-202ENST00000337318 GTF3C1Q12789 2109 aa12.31□□□□□ -0.44
FAM53B-202ENST00000337318 CD5LO43866 347 aa12.31□□□□□ -0.44
FAM53B-202ENST00000337318 PMVKQ15126 192 aa12.31□□□□□ -0.44
FAM53B-202ENST00000337318 DEFB104AQ8WTQ1 72 aa12.31□□□□□ -0.44
FAM53B-202ENST00000337318 C2orf66Q6UXQ4 117 aa12.31□□□□□ -0.44
FAM53B-202ENST00000337318 HIST3H2BBQ8N257 126 aa12.31□□□□□ -0.44
FAM53B-202ENST00000337318 ZNF843Q8N446 348 aa12.31□□□□□ -0.44
FAM53B-202ENST00000337318 SMKR1H3BMG3 65 aa12.31□□□□□ -0.44
FAM53B-202ENST00000337318 HLA-DRB4P13762 266 aa12.31□□□□□ -0.44
FAM53B-202ENST00000337318 AJUBAQ96IF1 538 aa12.31□□□□□ -0.44
FAM53B-202ENST00000337318 HLA-DRB4X5D2U9 266 aa12.31□□□□□ -0.44
FAM53B-202ENST00000337318 ARFGEF3Q5TH69 2177 aa12.3□□□□□ -0.44
FAM53B-202ENST00000337318 K7EMT4 169 aa12.3□□□□□ -0.44
FAM53B-202ENST00000337318 NPC2P61916 151 aa12.3□□□□□ -0.44
FAM53B-202ENST00000337318 IGFBPL1Q8WX77 278 aa12.3□□□□□ -0.44
FAM53B-202ENST00000337318 LINC00479Q96M42 142 aa12.3□□□□□ -0.44
FAM53B-202ENST00000337318 EDA2RQ9HAV5 297 aa12.3□□□□□ -0.44
FAM53B-202ENST00000337318 KLF5Q13887 457 aaPredicted RBP12.3□□□□□ -0.44
FAM53B-202ENST00000337318 U3KQE9 123 aa12.3□□□□□ -0.44
FAM53B-202ENST00000337318 FAM231DQ6ZW35 169 aa12.3□□□□□ -0.44
FAM53B-202ENST00000337318 CHAC1Q9BUX1 264 aa12.3□□□□□ -0.44
FAM53B-202ENST00000337318 BDP1A6H8Y1 2624 aa12.3□□□□□ -0.44
FAM53B-202ENST00000337318 H3BUT2 72 aa12.29□□□□□ -0.44
FAM53B-202ENST00000337318 HIST1H2BLQ99880 126 aa12.29□□□□□ -0.44
FAM53B-202ENST00000337318 MYLKQ15746 1914 aa12.29□□□□□ -0.44
FAM53B-202ENST00000337318 TRAV8-2A0A0B4J237 113 aa12.29□□□□□ -0.44
FAM53B-202ENST00000337318 MRPL52Q86TS9 123 aaKnown RBP12.29□□□□□ -0.44
FAM53B-202ENST00000337318 ZNF479Q96JC4 524 aa12.29□□□□□ -0.44
FAM53B-202ENST00000337318 IGKV1OR2-108A0A075B7D4 117 aa12.29□□□□□ -0.44
FAM53B-202ENST00000337318 MALRD1Q5VYJ5 2156 aa12.29□□□□□ -0.44
FAM53B-202ENST00000337318 A0A0J9YY99 117 aa12.28□□□□□ -0.44
FAM53B-202ENST00000337318 HERVK_113P63121 156 aa12.28□□□□□ -0.44
FAM53B-202ENST00000337318 SNHG12Q9BXW3 62 aa12.28□□□□□ -0.44
FAM53B-202ENST00000337318 TNFRSF13BO14836 293 aaPredicted RBP12.28□□□□□ -0.44
FAM53B-202ENST00000337318 NDUFA11Q86Y39 141 aa12.28□□□□□ -0.44
FAM53B-202ENST00000337318 Q8N9W7 124 aa12.28□□□□□ -0.44
FAM53B-202ENST00000337318 TMEM213A2RRL7 107 aa12.28□□□□□ -0.44
FAM53B-202ENST00000337318 DNAJC9-AS1A6NH13 148 aa12.28□□□□□ -0.44
FAM53B-202ENST00000337318 IGHG2P01859 326 aa12.28□□□□□ -0.44
FAM53B-202ENST00000337318 TM2D2Q9BX73 214 aa12.28□□□□□ -0.44
FAM53B-202ENST00000337318 A0A1B0GV72 72 aa12.27□□□□□ -0.44
FAM53B-202ENST00000337318 PRSS29PA6NIE9 313 aa12.27□□□□□ -0.44
FAM53B-202ENST00000337318 SHISA2Q6UWI4 295 aa12.27□□□□□ -0.44
FAM53B-202ENST00000337318 SIRPDQ9H106 197 aa12.27□□□□□ -0.44
FAM53B-202ENST00000337318 UBE2BP63146 152 aa12.27□□□□□ -0.45
FAM53B-202ENST00000337318 ZC2HC1BQ5TFG8 222 aa12.27□□□□□ -0.45
FAM53B-202ENST00000337318 IGLV11-55A0A075B6I3 123 aa12.27□□□□□ -0.45
FAM53B-202ENST00000337318 A0A096LPF7 62 aa12.27□□□□□ -0.45
FAM53B-202ENST00000337318 C20orf78Q9BR46 151 aa12.27□□□□□ -0.45
FAM53B-202ENST00000337318 GPHB5Q86YW7 130 aa12.27□□□□□ -0.45
FAM53B-202ENST00000337318 PLXND1Q9Y4D7 1925 aa12.26□□□□□ -0.45
FAM53B-202ENST00000337318 IGHV3-38A0A0C4DH36 116 aa12.26□□□□□ -0.45
FAM53B-202ENST00000337318 IGHV4OR15-8A0A075B7B6 117 aa12.26□□□□□ -0.45
FAM53B-202ENST00000337318 A0A087WW49 117 aa12.26□□□□□ -0.45
FAM53B-202ENST00000337318 ZFP36P26651 326 aaKnown RBP12.26□□□□□ -0.45
FAM53B-202ENST00000337318 HELZP42694 1942 aaKnown RBP12.26□□□□□ -0.45
FAM53B-202ENST00000337318 RPL32P62910 135 aaKnown RBP12.26□□□□□ -0.45
FAM53B-202ENST00000337318 Q6ZWC4 215 aa12.26□□□□□ -0.45
FAM53B-202ENST00000337318 ACACBO00763 2458 aa12.26□□□□□ -0.45
FAM53B-202ENST00000337318 Q6ZSR3 168 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms