RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 U3KQK5 164 aa8.66□□□□□ -1.02
SEC23B-202ENST00000336714 IFITM1P13164 125 aa8.65□□□□□ -1.02
SEC23B-202ENST00000336714 MRPL23Q16540 153 aaKnown RBP8.65□□□□□ -1.02
SEC23B-202ENST00000336714 PPP1R27Q86WC6 154 aa8.65□□□□□ -1.02
SEC23B-202ENST00000336714 TMEM167AQ8TBQ9 72 aa8.65□□□□□ -1.02
SEC23B-202ENST00000336714 NTN5Q8WTR8 489 aaPredicted RBP8.65□□□□□ -1.02
SEC23B-202ENST00000336714 IGHV1-18A0A0C4DH31 117 aa8.65□□□□□ -1.03
SEC23B-202ENST00000336714 FAM110AQ9BQ89 295 aa8.65□□□□□ -1.03
SEC23B-202ENST00000336714 ZNF71Q9NQZ8 489 aaPredicted RBP8.65□□□□□ -1.03
SEC23B-202ENST00000336714 IGHV3-66A0A0C4DH42 116 aa8.64□□□□□ -1.03
SEC23B-202ENST00000336714 ATP5IP56385 69 aaPredicted RBP8.64□□□□□ -1.03
SEC23B-202ENST00000336714 ZMAT4Q9H898 229 aa8.64□□□□□ -1.03
SEC23B-202ENST00000336714 NXT2Q9NPJ8 142 aaKnown RBP8.64□□□□□ -1.03
SEC23B-202ENST00000336714 LAMA5O15230 3695 aa8.64□□□□□ -1.03
SEC23B-202ENST00000336714 TNRC18O15417 2968 aaPredicted RBP8.64□□□□□ -1.03
SEC23B-202ENST00000336714 ATP5J2P56134 94 aa8.64□□□□□ -1.03
SEC23B-202ENST00000336714 TNFAIP6P98066 277 aaPredicted RBP8.64□□□□□ -1.03
SEC23B-202ENST00000336714 C6orf15Q6UXA7 325 aaPredicted RBP8.64□□□□□ -1.03
SEC23B-202ENST00000336714 OR11H6Q8NGC7 330 aa8.64□□□□□ -1.03
SEC23B-202ENST00000336714 GAFA1Q96PS6 74 aa8.64□□□□□ -1.03
SEC23B-202ENST00000336714 SCGB3A1Q96QR1 104 aa8.64□□□□□ -1.03
SEC23B-202ENST00000336714 DMXL1Q9Y485 3027 aa8.64□□□□□ -1.03
SEC23B-202ENST00000336714 RELNP78509 3460 aa8.63□□□□□ -1.03
SEC23B-202ENST00000336714 SLC25A20O43772 301 aa8.63□□□□□ -1.03
SEC23B-202ENST00000336714 IGKV1-17P01599 117 aa8.63□□□□□ -1.03
SEC23B-202ENST00000336714 PMS2CLQ68D20 193 aa8.63□□□□□ -1.03
SEC23B-202ENST00000336714 RNF7Q9UBF6 113 aa8.63□□□□□ -1.03
SEC23B-202ENST00000336714 IGHV3-64A0A075B6Q5 118 aa8.63□□□□□ -1.03
SEC23B-202ENST00000336714 A0A087WX48 190 aa8.63□□□□□ -1.03
SEC23B-202ENST00000336714 VSTM5A8MXK1 200 aa8.63□□□□□ -1.03
SEC23B-202ENST00000336714 M0QXV9 152 aa8.63□□□□□ -1.03
SEC23B-202ENST00000336714 CHCHD5Q9BSY4 110 aa8.63□□□□□ -1.03
SEC23B-202ENST00000336714 RAB9BQ9NP90 201 aa8.63□□□□□ -1.03
SEC23B-202ENST00000336714 TEX49A0A1B0GTD5 131 aa8.63□□□□□ -1.03
SEC23B-202ENST00000336714 SRSF1Q07955 248 aaKnown RBP eCLIP8.63□□□□□ -1.03
SEC23B-202ENST00000336714 LAGE3Q14657 143 aa8.63□□□□□ -1.03
SEC23B-202ENST00000336714 C15orf53Q8NAA6 179 aa8.63□□□□□ -1.03
SEC23B-202ENST00000336714 NOTCH3Q9UM47 2321 aa8.63□□□□□ -1.03
SEC23B-202ENST00000336714 IGHV3-49A0A0A0MS15 119 aa8.62□□□□□ -1.03
SEC23B-202ENST00000336714 IGKV3-15P01624 115 aa8.62□□□□□ -1.03
SEC23B-202ENST00000336714 Q6ZT83 130 aa8.62□□□□□ -1.03
SEC23B-202ENST00000336714 PRR25Q96S07 402 aa8.62□□□□□ -1.03
SEC23B-202ENST00000336714 TAL2Q16559 108 aa8.62□□□□□ -1.03
SEC23B-202ENST00000336714 ATP6V0E2Q8NHE4 81 aa8.62□□□□□ -1.03
SEC23B-202ENST00000336714 RNF125Q96EQ8 232 aa8.62□□□□□ -1.03
SEC23B-202ENST00000336714 YAE1D1Q9NRH1 226 aa8.62□□□□□ -1.03
SEC23B-202ENST00000336714 RHODO00212 210 aa8.61□□□□□ -1.03
SEC23B-202ENST00000336714 IGLV2-23P01705 113 aa8.61□□□□□ -1.03
SEC23B-202ENST00000336714 PTPRZ1P23471 2315 aaPredicted RBP8.61□□□□□ -1.03
SEC23B-202ENST00000336714 COX7A1P24310 79 aa8.61□□□□□ -1.03
SEC23B-202ENST00000336714 Q6ZS46 218 aa8.61□□□□□ -1.03
SEC23B-202ENST00000336714 ZNF833PQ6ZTB9 187 aa8.61□□□□□ -1.03
SEC23B-202ENST00000336714 RNF182Q8N6D2 247 aa8.61□□□□□ -1.03
SEC23B-202ENST00000336714 CCL17Q92583 94 aa8.61□□□□□ -1.03
SEC23B-202ENST00000336714 F8VRH5 84 aa8.6□□□□□ -1.03
SEC23B-202ENST00000336714 MZT1Q08AG7 82 aa8.6□□□□□ -1.03
SEC23B-202ENST00000336714 SPANXN1Q5VSR9 72 aa8.6□□□□□ -1.03
SEC23B-202ENST00000336714 C9orf106Q8NAJ2 232 aa8.6□□□□□ -1.03
SEC23B-202ENST00000336714 SHANK2-AS3Q9BTD1 123 aa8.6□□□□□ -1.03
SEC23B-202ENST00000336714 SPTAN1Q13813 2472 aaKnown RBP8.6□□□□□ -1.03
SEC23B-202ENST00000336714 TMEM262E9PQX1 116 aa8.6□□□□□ -1.03
SEC23B-202ENST00000336714 H7C1H1 209 aa8.6□□□□□ -1.03
SEC23B-202ENST00000336714 PLNP26678 52 aa8.6□□□□□ -1.03
SEC23B-202ENST00000336714 TMEM200BQ69YZ2 307 aa8.6□□□□□ -1.03
SEC23B-202ENST00000336714 Q8N8P6 123 aa8.6□□□□□ -1.03
SEC23B-202ENST00000336714 NDUFA11Q86Y39 141 aa8.6□□□□□ -1.03
SEC23B-202ENST00000336714 EP300Q09472 2414 aaPredicted RBP8.59□□□□□ -1.03
SEC23B-202ENST00000336714 M0R381 172 aa8.59□□□□□ -1.03
SEC23B-202ENST00000336714 CRYGCP07315 174 aa8.59□□□□□ -1.03
SEC23B-202ENST00000336714 CXCL12P48061 93 aa8.59□□□□□ -1.03
SEC23B-202ENST00000336714 TCF15Q12870 199 aa8.59□□□□□ -1.03
SEC23B-202ENST00000336714 LOC107984640A0A0U1RRK4 108 aa8.59□□□□□ -1.03
SEC23B-202ENST00000336714 PRAC2D3DTV9 90 aa8.59□□□□□ -1.03
SEC23B-202ENST00000336714 MGPP08493 103 aa8.59□□□□□ -1.03
SEC23B-202ENST00000336714 TMEM170BQ5T4T1 132 aa8.59□□□□□ -1.03
SEC23B-202ENST00000336714 IL17RELQ6ZVW7 336 aa8.59□□□□□ -1.03
SEC23B-202ENST00000336714 GATD1Q8NB37 220 aa8.59□□□□□ -1.03
SEC23B-202ENST00000336714 CFHR4Q92496 578 aa8.59□□□□□ -1.03
SEC23B-202ENST00000336714 ZNF56Q15929 161 aa8.58□□□□□ -1.04
SEC23B-202ENST00000336714 LYPD2Q6UXB3 125 aa8.58□□□□□ -1.04
SEC23B-202ENST00000336714 ZNF491Q8N8L2 437 aa8.58□□□□□ -1.04
SEC23B-202ENST00000336714 PIFOQ8TCI5 191 aa8.58□□□□□ -1.04
SEC23B-202ENST00000336714 DOPEY2Q9Y3R5 2298 aa8.58□□□□□ -1.04
SEC23B-202ENST00000336714 SHISA9B4DS77 424 aa8.58□□□□□ -1.04
SEC23B-202ENST00000336714 HOXB4P17483 251 aaPredicted RBP8.58□□□□□ -1.04
SEC23B-202ENST00000336714 Q8N1Y9 231 aa8.58□□□□□ -1.04
SEC23B-202ENST00000336714 TRIOBPQ9H2D6 2365 aa8.58□□□□□ -1.04
SEC23B-202ENST00000336714 PIEZO2Q9H5I5 2752 aa8.58□□□□□ -1.04
SEC23B-202ENST00000336714 TRAV8-4A0A0B4J246 113 aa8.58□□□□□ -1.04
SEC23B-202ENST00000336714 LYRM7Q5U5X0 104 aa8.58□□□□□ -1.04
SEC23B-202ENST00000336714 VPREB3Q9UKI3 123 aa8.58□□□□□ -1.04
SEC23B-202ENST00000336714 TNFRSF18Q9Y5U5 241 aa8.58□□□□□ -1.04
SEC23B-202ENST00000336714 CREBBPQ92793 2442 aa8.58□□□□□ -1.04
SEC23B-202ENST00000336714 TRAV2A0A0B4J234 112 aa8.57□□□□□ -1.04
SEC23B-202ENST00000336714 ELANEP08246 267 aa8.57□□□□□ -1.04
SEC23B-202ENST00000336714 CFC1BP0CG36 223 aa8.57□□□□□ -1.04
SEC23B-202ENST00000336714 CFC1P0CG37 223 aa8.57□□□□□ -1.04
SEC23B-202ENST00000336714 RPL39LQ96EH5 51 aaKnown RBP8.57□□□□□ -1.04
SEC23B-202ENST00000336714 H3BRN7 92 aa8.57□□□□□ -1.04
SEC23B-202ENST00000336714 NPC2P61916 151 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms