RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 PAX4O43316 350 aa12.29□□□□□ -0.44
CMTM1-204ENST00000336328 TNP2Q05952 138 aa12.29□□□□□ -0.44
CMTM1-204ENST00000336328 ZNF415Q09FC8 603 aa12.29□□□□□ -0.44
CMTM1-204ENST00000336328 ZNF266Q14584 549 aa12.29□□□□□ -0.44
CMTM1-204ENST00000336328 ACOT6Q3I5F7 207 aaPredicted RBP12.29□□□□□ -0.44
CMTM1-204ENST00000336328 ARL6IP6Q8N6S5 226 aa12.29□□□□□ -0.44
CMTM1-204ENST00000336328 CMTM2Q8TAZ6 248 aa12.29□□□□□ -0.44
CMTM1-204ENST00000336328 TMED6Q8WW62 240 aa12.29□□□□□ -0.44
CMTM1-204ENST00000336328 VSIG2Q96IQ7 327 aa12.29□□□□□ -0.44
CMTM1-204ENST00000336328 PRO0255Q9UI72 69 aa12.29□□□□□ -0.44
CMTM1-204ENST00000336328 A0A096LPF7 62 aa12.28□□□□□ -0.44
CMTM1-204ENST00000336328 DIRC3C9JPN6 131 aa12.28□□□□□ -0.44
CMTM1-204ENST00000336328 PQLC2Q6ZP29 291 aa12.28□□□□□ -0.44
CMTM1-204ENST00000336328 SMIM3Q9BZL3 60 aa12.28□□□□□ -0.44
CMTM1-204ENST00000336328 ICOSQ9Y6W8 199 aa12.28□□□□□ -0.44
CMTM1-204ENST00000336328 FAM159AQ6UWV7 190 aa12.27□□□□□ -0.45
CMTM1-204ENST00000336328 SPXQ9BT56 116 aa12.27□□□□□ -0.45
CMTM1-204ENST00000336328 BATF3Q9NR55 127 aa12.27□□□□□ -0.45
CMTM1-204ENST00000336328 OTORQ9NRC9 128 aa12.27□□□□□ -0.45
CMTM1-204ENST00000336328 MBD2Q9UBB5 411 aa12.27□□□□□ -0.45
CMTM1-204ENST00000336328 TP53TG3Q9ULZ0 132 aa12.27□□□□□ -0.45
CMTM1-204ENST00000336328 PGPA6NDG6 321 aa12.26□□□□□ -0.45
CMTM1-204ENST00000336328 C16orf90A8MZG2 172 aa12.26□□□□□ -0.45
CMTM1-204ENST00000336328 MRPL23Q16540 153 aaKnown RBP12.26□□□□□ -0.45
CMTM1-204ENST00000336328 PRR9Q5T870 116 aa12.26□□□□□ -0.45
CMTM1-204ENST00000336328 ZNF575Q86XF7 245 aa12.26□□□□□ -0.45
CMTM1-204ENST00000336328 HHLA3Q9XRX5 114 aa12.26□□□□□ -0.45
CMTM1-204ENST00000336328 TRGV11A0A075B6L2 103 aa12.25□□□□□ -0.45
CMTM1-204ENST00000336328 Q6AWC8 147 aa12.25□□□□□ -0.45
CMTM1-204ENST00000336328 Q8TAT8 98 aa12.25□□□□□ -0.45
CMTM1-204ENST00000336328 HYLS1Q96M11 299 aa12.25□□□□□ -0.45
CMTM1-204ENST00000336328 KIAA1109Q2LD37 5005 aa12.25□□□□□ -0.45
CMTM1-204ENST00000336328 SIVA1O15304 175 aa12.24□□□□□ -0.45
CMTM1-204ENST00000336328 MRPL16Q9NX20 251 aaKnown RBP12.24□□□□□ -0.45
CMTM1-204ENST00000336328 TRGV4A0A0C4DH28 118 aa12.23□□□□□ -0.45
CMTM1-204ENST00000336328 IGHV3-53P01767 116 aa12.23□□□□□ -0.45
CMTM1-204ENST00000336328 CRYBA4P53673 196 aa12.23□□□□□ -0.45
CMTM1-204ENST00000336328 MUC21Q5SSG8 566 aa12.23□□□□□ -0.45
CMTM1-204ENST00000336328 IQCF2Q8IXL9 164 aa12.23□□□□□ -0.45
CMTM1-204ENST00000336328 PKHD1P08F94 4074 aa12.22□□□□□ -0.45
CMTM1-204ENST00000336328 TRAV9-2A0A087WT02 112 aa12.22□□□□□ -0.45
CMTM1-204ENST00000336328 FHL2Q14192 279 aa12.22□□□□□ -0.45
CMTM1-204ENST00000336328 TDRG1Q3Y452 100 aa12.22□□□□□ -0.45
CMTM1-204ENST00000336328 Q6ZQT7 251 aa12.22□□□□□ -0.45
CMTM1-204ENST00000336328 NEGR1Q7Z3B1 354 aa12.22□□□□□ -0.45
CMTM1-204ENST00000336328 OR10G4Q8NGN3 311 aa12.22□□□□□ -0.45
CMTM1-204ENST00000336328 OR10G9Q8NGN4 311 aa12.22□□□□□ -0.45
CMTM1-204ENST00000336328 OR10G7Q8NGN6 311 aa12.22□□□□□ -0.45
CMTM1-204ENST00000336328 RASL10AQ92737 203 aa12.22□□□□□ -0.45
CMTM1-204ENST00000336328 WFDC1Q9HC57 220 aa12.22□□□□□ -0.45
CMTM1-204ENST00000336328 PKD1P98161 4303 aa12.22□□□□□ -0.45
CMTM1-204ENST00000336328 TRAV21A0A0B4J279 112 aa12.21□□□□□ -0.45
CMTM1-204ENST00000336328 SERTM2A0A1B0GWG4 89 aa12.21□□□□□ -0.45
CMTM1-204ENST00000336328 MBP02144 154 aa12.21□□□□□ -0.45
CMTM1-204ENST00000336328 TMEM183BQ1AE95 376 aa12.21□□□□□ -0.45
CMTM1-204ENST00000336328 TMEM183AQ8IXX5 376 aa12.21□□□□□ -0.45
CMTM1-204ENST00000336328 KCNS1Q96KK3 526 aa12.21□□□□□ -0.45
CMTM1-204ENST00000336328 MDFICQ9P1T7 246 aa12.21□□□□□ -0.45
CMTM1-204ENST00000336328 CDK2AP2O75956 126 aa12.2□□□□□ -0.46
CMTM1-204ENST00000336328 ORM1P02763 201 aa12.2□□□□□ -0.46
CMTM1-204ENST00000336328 PCNPQ8WW12 178 aaKnown RBP12.2□□□□□ -0.46
CMTM1-204ENST00000336328 C8orf49Q96NF6 230 aa12.2□□□□□ -0.46
CMTM1-204ENST00000336328 NDFIP1Q9BT67 221 aa12.2□□□□□ -0.46
CMTM1-204ENST00000336328 RPH3ALQ9UNE2 315 aa12.2□□□□□ -0.46
CMTM1-204ENST00000336328 K7EP13 123 aa12.19□□□□□ -0.46
CMTM1-204ENST00000336328 K7EQM0 130 aa12.19□□□□□ -0.46
CMTM1-204ENST00000336328 NXPH4O95158 308 aa12.19□□□□□ -0.46
CMTM1-204ENST00000336328 SERF2P84101 59 aa12.19□□□□□ -0.46
CMTM1-204ENST00000336328 LYPD5Q6UWN5 251 aa12.19□□□□□ -0.46
CMTM1-204ENST00000336328 GOLT1AQ6ZVE7 132 aa12.19□□□□□ -0.46
CMTM1-204ENST00000336328 PSMG3Q9BT73 122 aaPredicted RBP12.19□□□□□ -0.46
CMTM1-204ENST00000336328 KRTAP1-5Q9BYS1 174 aa12.19□□□□□ -0.46
CMTM1-204ENST00000336328 MED28Q9H204 178 aa12.19□□□□□ -0.46
CMTM1-204ENST00000336328 TREM1Q9NP99 234 aa12.19□□□□□ -0.46
CMTM1-204ENST00000336328 ALG5Q9Y673 324 aa12.19□□□□□ -0.46
CMTM1-204ENST00000336328 DNAH11Q96DT5 4516 aa12.19□□□□□ -0.46
CMTM1-204ENST00000336328 M0R2P5 195 aa12.18□□□□□ -0.46
CMTM1-204ENST00000336328 EREGO14944 169 aa12.18□□□□□ -0.46
CMTM1-204ENST00000336328 SRIP30626 198 aa12.18□□□□□ -0.46
CMTM1-204ENST00000336328 CDC34P49427 236 aaPredicted RBP12.18□□□□□ -0.46
CMTM1-204ENST00000336328 RAB2AP61019 212 aa12.18□□□□□ -0.46
CMTM1-204ENST00000336328 SPATA12Q7Z6I5 190 aa12.18□□□□□ -0.46
CMTM1-204ENST00000336328 NFE4Q86UQ8 179 aa12.18□□□□□ -0.46
CMTM1-204ENST00000336328 OR2G3Q8NGZ4 309 aa12.18□□□□□ -0.46
CMTM1-204ENST00000336328 ASB13Q8WXK3 278 aa12.18□□□□□ -0.46
CMTM1-204ENST00000336328 NAGKQ9UJ70 344 aa12.18□□□□□ -0.46
CMTM1-204ENST00000336328 TRAV4A0A0B4J268 109 aa12.17□□□□□ -0.46
CMTM1-204ENST00000336328 PTTG1O95997 202 aa12.17□□□□□ -0.46
CMTM1-204ENST00000336328 SH2D6Q7Z4S9 175 aa12.17□□□□□ -0.46
CMTM1-204ENST00000336328 OR4C5Q8NGB2 326 aa12.17□□□□□ -0.46
CMTM1-204ENST00000336328 TXNDC17Q9BRA2 123 aa12.17□□□□□ -0.46
CMTM1-204ENST00000336328 SDF2L1Q9HCN8 221 aa12.17□□□□□ -0.46
CMTM1-204ENST00000336328 C9JCJ5 164 aa12.16□□□□□ -0.46
CMTM1-204ENST00000336328 CIDEAO60543 219 aa12.16□□□□□ -0.46
CMTM1-204ENST00000336328 STAG3L2P0CL84 134 aa12.16□□□□□ -0.46
CMTM1-204ENST00000336328 STAG3L3P0CL85 134 aa12.16□□□□□ -0.46
CMTM1-204ENST00000336328 LINC00315P59091 139 aa12.16□□□□□ -0.46
CMTM1-204ENST00000336328 C5orf17Q8NAS9 161 aa12.16□□□□□ -0.46
CMTM1-204ENST00000336328 HSD17B11Q8NBQ5 300 aa12.16□□□□□ -0.46
CMTM1-204ENST00000336328 ZNF479Q96JC4 524 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms