RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 SMIM2Q9BVW6 85 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 PIEZO2Q9H5I5 2752 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 M0R1W7 72 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 IGKV1-5P01602 117 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 YPEL3P61236 119 aaPredicted RBP5.02□□□□□ -1.61
CSMD1-201ENST00000335551 MRPL51Q4U2R6 128 aaKnown RBP5.02□□□□□ -1.61
CSMD1-201ENST00000335551 WIPF2Q8TF74 440 aaPredicted RBP5.02□□□□□ -1.61
CSMD1-201ENST00000335551 RMI2Q96E14 147 aa5.02□□□□□ -1.61
CSMD1-201ENST00000335551 H0YGX0 51 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 CELA3BP08861 270 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 MST1P26927 711 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 PFN2P35080 140 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 CXCL5P42830 114 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 C5orf64Q2M2E5 130 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 CR1LQ2VPA4 569 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 SP7Q8TDD2 431 aaPredicted RBP5.01□□□□□ -1.61
CSMD1-201ENST00000335551 GFI1Q99684 422 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 DAZ1Q9NQZ3 744 aaKnown RBP5.01□□□□□ -1.61
CSMD1-201ENST00000335551 PRSS29PA6NIE9 313 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 PROP1O75360 226 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 SPTSSBQ8NFR3 76 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 SPAARA0A1B0GVQ0 90 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 ICOSQ9Y6W8 199 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 CSRP3P50461 194 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 MRPL23Q16540 153 aaKnown RBP5.01□□□□□ -1.61
CSMD1-201ENST00000335551 FAM240AA0A1B0GVK7 77 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 C15orf62A8K5M9 175 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 LINC00527Q9UJ94 153 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 ZFP2Q6ZN57 461 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 MRPL35Q9NZE8 188 aaKnown RBP5.01□□□□□ -1.61
CSMD1-201ENST00000335551 MTORP42345 2549 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 SDHAF1A6NFY7 115 aa5.01□□□□□ -1.61
CSMD1-201ENST00000335551 NDUFV3P56181 108 aaKnown RBP5.01□□□□□ -1.61
CSMD1-201ENST00000335551 PAQR4Q8N4S7 273 aaPredicted RBP5.01□□□□□ -1.61
CSMD1-201ENST00000335551 PDE6GP18545 87 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 C8orf86Q6ZUL3 223 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 LYZL4Q96KX0 146 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 G3V4G9 280 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 CCL3L1P16619 93 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 IGLV3-32A0A0A0MS00 114 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 IGLC7A0M8Q6 106 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 SAP30O75446 220 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 IL15RAQ13261 267 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 ZCCHC24Q8N2G6 241 aaKnown RBP5□□□□□ -1.61
CSMD1-201ENST00000335551 VSIG2Q96IQ7 327 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 H0YJW9 148 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 HERV-K104P63124 156 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 PNRC2Q9NPJ4 139 aaKnown RBP5□□□□□ -1.61
CSMD1-201ENST00000335551 NTF4P34130 210 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 LINC01620Q4KN68 170 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 IL17DQ8TAD2 202 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 V9GYV3 84 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 TNS1Q9HBL0 1735 aaKnown RBP5□□□□□ -1.61
CSMD1-201ENST00000335551 NDUFB1O75438 58 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 CGB7P0DN87 165 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 PRR31Q5SQ13 230 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 RNF166Q96A37 237 aaPredicted RBP5□□□□□ -1.61
CSMD1-201ENST00000335551 K7ERS5 55 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 TRAV26-1A0A087WT03 109 aa5□□□□□ -1.61
CSMD1-201ENST00000335551 IGLL5B9A064 214 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 CRYGBP07316 175 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 IGLC1P0CG04 106 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 ATP5EP2Q5VTU8 51 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 TMEM14CQ9P0S9 112 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 NDUFS7O75251 213 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 IGHV1-3A0A0C4DH29 117 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 NDUFC2-KCTD14E9PQ53 114 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 IGHV1-8P0DP01 117 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 RSPO4Q2I0M5 234 aaPredicted RBP4.99□□□□□ -1.61
CSMD1-201ENST00000335551 TMEM14BQ9NUH8 114 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 PRR19A6NJB7 356 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 CRYGCP07315 174 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 CRYGSP22914 178 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 IGHV1-2P23083 117 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 Q71RC1 249 aaPredicted RBP4.99□□□□□ -1.61
CSMD1-201ENST00000335551 DKK2Q9UBU2 259 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 SLC25A29Q8N8R3 303 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 C14orf132Q9NPU4 83 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 TMEM213A2RRL7 107 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 DSCR9P59020 149 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 UBE2BP63146 152 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 SRRM5B3KS81 715 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 HIGD1BQ9P298 99 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 ABCA12Q86UK0 2595 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 PTPRSQ13332 1948 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 MST1LQ2TV78 715 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 C8orf49Q96NF6 230 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 PIEZO1Q92508 2521 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 WDR90Q96KV7 1748 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 PRR15LQ9BU68 103 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 FGFBP3Q8TAT2 258 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 LINC01560Q8TB33 94 aa4.99□□□□□ -1.61
CSMD1-201ENST00000335551 ZNF883P0CG24 379 aa4.98□□□□□ -1.61
CSMD1-201ENST00000335551 RS1O15537 224 aa4.98□□□□□ -1.61
CSMD1-201ENST00000335551 FAM201AQ5SY85 155 aa4.98□□□□□ -1.61
CSMD1-201ENST00000335551 IGKV1D-43A0A0B4J1Z2 117 aa4.98□□□□□ -1.61
CSMD1-201ENST00000335551 FOXI1Q12951 378 aa4.98□□□□□ -1.61
CSMD1-201ENST00000335551 OPRPNQ99935 248 aaPredicted RBP4.98□□□□□ -1.61
CSMD1-201ENST00000335551 MSRB2Q9Y3D2 182 aa4.98□□□□□ -1.61
CSMD1-201ENST00000335551 RFPL3SP0C7P2 107 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms