RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 RBMY1FQ15415 496 aaKnown RBP12.74□□□□□ -0.37
CHGA-202ENST00000334654 Q86TA4 180 aa12.74□□□□□ -0.37
CHGA-202ENST00000334654 B9D2Q9BPU9 175 aa12.74□□□□□ -0.37
CHGA-202ENST00000334654 SNAPINO95295 136 aa12.73□□□□□ -0.37
CHGA-202ENST00000334654 LTAP01374 205 aa12.73□□□□□ -0.37
CHGA-202ENST00000334654 APOC3P02656 99 aa12.73□□□□□ -0.37
CHGA-202ENST00000334654 AMBPP02760 352 aa12.73□□□□□ -0.37
CHGA-202ENST00000334654 TSPOP30536 169 aa12.73□□□□□ -0.37
CHGA-202ENST00000334654 RPL35P42766 123 aaKnown RBP12.73□□□□□ -0.37
CHGA-202ENST00000334654 GFI1BQ5VTD9 330 aa12.73□□□□□ -0.37
CHGA-202ENST00000334654 Q6ZWC4 215 aa12.73□□□□□ -0.37
CHGA-202ENST00000334654 C1orf158Q8N1D5 194 aa12.73□□□□□ -0.37
CHGA-202ENST00000334654 IGF2BP2-AS1Q96M15 143 aa12.73□□□□□ -0.37
CHGA-202ENST00000334654 C8orf49Q96NF6 230 aa12.73□□□□□ -0.37
CHGA-202ENST00000334654 TRBV20OR9-2A0A075B6H5 130 aa12.72□□□□□ -0.37
CHGA-202ENST00000334654 J3KRW8 73 aa12.72□□□□□ -0.37
CHGA-202ENST00000334654 S100A9P06702 114 aaKnown RBP12.72□□□□□ -0.37
CHGA-202ENST00000334654 UBE2G1P62253 170 aa12.72□□□□□ -0.37
CHGA-202ENST00000334654 Q6ZQT7 251 aa12.72□□□□□ -0.37
CHGA-202ENST00000334654 TM2D3Q9BRN9 247 aa12.72□□□□□ -0.37
CHGA-202ENST00000334654 C1QTNF4Q9BXJ3 329 aa12.72□□□□□ -0.37
CHGA-202ENST00000334654 TAS2R60P59551 318 aa12.72□□□□□ -0.37
CHGA-202ENST00000334654 BTN1A1Q13410 526 aa12.72□□□□□ -0.37
CHGA-202ENST00000334654 DEFB135Q30KP9 77 aa12.72□□□□□ -0.37
CHGA-202ENST00000334654 COX8CQ7Z4L0 72 aa12.72□□□□□ -0.37
CHGA-202ENST00000334654 RNF183Q96D59 192 aa12.72□□□□□ -0.37
CHGA-202ENST00000334654 MLST8Q9BVC4 326 aa12.72□□□□□ -0.37
CHGA-202ENST00000334654 ZFP30Q9Y2G7 519 aa12.72□□□□□ -0.37
CHGA-202ENST00000334654 DNAH9Q9NYC9 4486 aa12.71□□□□□ -0.37
CHGA-202ENST00000334654 ZNF324O75467 553 aaPredicted RBP12.71□□□□□ -0.38
CHGA-202ENST00000334654 IGLV2-8P01709 118 aa12.71□□□□□ -0.38
CHGA-202ENST00000334654 GPX1P07203 203 aa12.71□□□□□ -0.38
CHGA-202ENST00000334654 ZNF80P51504 273 aaPredicted RBP12.71□□□□□ -0.38
CHGA-202ENST00000334654 PNRC1Q12796 327 aaPredicted RBP12.71□□□□□ -0.38
CHGA-202ENST00000334654 SAPCD1Q5SSQ6 148 aa12.71□□□□□ -0.38
CHGA-202ENST00000334654 PARLQ9H300 379 aa12.71□□□□□ -0.38
CHGA-202ENST00000334654 C7orf71A4D174 169 aa12.7□□□□□ -0.38
CHGA-202ENST00000334654 ADCYAP1P18509 176 aa12.7□□□□□ -0.38
CHGA-202ENST00000334654 RNASE4P34096 147 aaKnown RBP12.7□□□□□ -0.38
CHGA-202ENST00000334654 ZNF705AQ6ZN79 300 aaPredicted RBP12.7□□□□□ -0.38
CHGA-202ENST00000334654 OVOL2Q9BRP0 275 aa12.7□□□□□ -0.38
CHGA-202ENST00000334654 NIPSNAP3BQ9BS92 247 aa12.7□□□□□ -0.38
CHGA-202ENST00000334654 RETNQ9HD89 108 aa12.7□□□□□ -0.38
CHGA-202ENST00000334654 TRAV12-3A0A0B4J271 114 aa12.69□□□□□ -0.38
CHGA-202ENST00000334654 INSP01308 110 aa12.69□□□□□ -0.38
CHGA-202ENST00000334654 Q6AWC8 147 aa12.69□□□□□ -0.38
CHGA-202ENST00000334654 BAGE2Q86Y30 109 aa12.69□□□□□ -0.38
CHGA-202ENST00000334654 TMEM183AQ8IXX5 376 aa12.69□□□□□ -0.38
CHGA-202ENST00000334654 ZC2HC1AQ96GY0 325 aa12.69□□□□□ -0.38
CHGA-202ENST00000334654 NDFIP1Q9BT67 221 aa12.69□□□□□ -0.38
CHGA-202ENST00000334654 TP53TG1Q9Y2A0 90 aa12.69□□□□□ -0.38
CHGA-202ENST00000334654 CRIP1P50238 77 aa12.68□□□□□ -0.38
CHGA-202ENST00000334654 CENPWQ5EE01 88 aa12.68□□□□□ -0.38
CHGA-202ENST00000334654 NHLRC2Q8NBF2 726 aa12.68□□□□□ -0.38
CHGA-202ENST00000334654 C20orf144Q9BQM9 153 aa12.68□□□□□ -0.38
CHGA-202ENST00000334654 X6R8D5 127 aa12.68□□□□□ -0.38
CHGA-202ENST00000334654 PGPEP1LA6NFU8 196 aa12.67□□□□□ -0.38
CHGA-202ENST00000334654 B4DEV8 164 aa12.67□□□□□ -0.38
CHGA-202ENST00000334654 SPRY2O43597 315 aa12.67□□□□□ -0.38
CHGA-202ENST00000334654 CEBPGP53567 150 aa12.67□□□□□ -0.38
CHGA-202ENST00000334654 SMUG1Q53HV7 270 aa12.67□□□□□ -0.38
CHGA-202ENST00000334654 RCHY1Q96PM5 261 aa12.67□□□□□ -0.38
CHGA-202ENST00000334654 GCGP01275 180 aa12.66□□□□□ -0.38
CHGA-202ENST00000334654 PRM2P04554 102 aa12.66□□□□□ -0.38
CHGA-202ENST00000334654 ZNF674Q2M3X9 581 aa12.66□□□□□ -0.38
CHGA-202ENST00000334654 ZNF727A8MUV8 499 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 C9JCJ5 164 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 GNG4P50150 75 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 RHEBQ15382 184 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 CLRN3Q8NCR9 226 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 SPATA25Q9BR10 227 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 C11orf21Q9P2W6 132 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 HUWE1Q7Z6Z7 4374 aaKnown RBP12.65□□□□□ -0.38
CHGA-202ENST00000334654 TMEM241Q24JQ0 296 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 TMEM256Q8N2U0 113 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 OR11H2Q8NH07 326 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 OCC1Q8TAD7 63 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 NEU1Q99519 415 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 SMIM7Q9BQ49 75 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 NAT8Q9UHE5 227 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 GOLT1BQ9Y3E0 138 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 LY96Q9Y6Y9 160 aa12.65□□□□□ -0.38
CHGA-202ENST00000334654 IGHV3OR16-12A0A075B7B8 117 aa12.64□□□□□ -0.39
CHGA-202ENST00000334654 H7BYZ3 331 aa12.64□□□□□ -0.39
CHGA-202ENST00000334654 PFN1P07737 140 aaKnown RBP12.64□□□□□ -0.39
CHGA-202ENST00000334654 SMIM12Q96EX1 92 aa12.64□□□□□ -0.39
CHGA-202ENST00000334654 TGP01266 2768 aa12.63□□□□□ -0.39
CHGA-202ENST00000334654 STAB2Q8WWQ8 2551 aa12.63□□□□□ -0.39
CHGA-202ENST00000334654 TRAV21A0A0B4J279 112 aa12.63□□□□□ -0.39
CHGA-202ENST00000334654 K7EN84 100 aa12.63□□□□□ -0.39
CHGA-202ENST00000334654 AZU1P20160 251 aa12.63□□□□□ -0.39
CHGA-202ENST00000334654 ZNF575Q86XF7 245 aa12.63□□□□□ -0.39
CHGA-202ENST00000334654 LINC01587Q99440 93 aa12.63□□□□□ -0.39
CHGA-202ENST00000334654 LINC00467Q9BRT7 94 aa12.63□□□□□ -0.39
CHGA-202ENST00000334654 SDF2L1Q9HCN8 221 aa12.63□□□□□ -0.39
CHGA-202ENST00000334654 FABP5P3A8MUU1 101 aa12.62□□□□□ -0.39
CHGA-202ENST00000334654 ZNF705GA8MUZ8 300 aaPredicted RBP12.62□□□□□ -0.39
CHGA-202ENST00000334654 NHLRC4P0CG21 123 aaPredicted RBP12.62□□□□□ -0.39
CHGA-202ENST00000334654 PYGO2Q9BRQ0 406 aa12.62□□□□□ -0.39
CHGA-202ENST00000334654 TMEM208Q9BTX3 173 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms