RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 MXRA5Q9NR99 2828 aa6.86□□□□□ -1.31
TREM1-202ENST00000334475 IGHV3-35A0A0C4DH35 117 aa6.86□□□□□ -1.31
TREM1-202ENST00000334475 K7EMT4 169 aa6.86□□□□□ -1.31
TREM1-202ENST00000334475 ARMS2P0C7Q2 107 aa6.86□□□□□ -1.31
TREM1-202ENST00000334475 IGLC6P0CF74 106 aa6.86□□□□□ -1.31
TREM1-202ENST00000334475 PF4V1P10720 104 aa6.86□□□□□ -1.31
TREM1-202ENST00000334475 LBHQ53QV2 105 aaPredicted RBP6.86□□□□□ -1.31
TREM1-202ENST00000334475 TMEM78Q5T7P6 136 aa6.86□□□□□ -1.31
TREM1-202ENST00000334475 NIT1Q86X76 327 aa6.86□□□□□ -1.31
TREM1-202ENST00000334475 C20orf144Q9BQM9 153 aa6.86□□□□□ -1.31
TREM1-202ENST00000334475 NPFFR1Q9GZQ6 430 aa6.86□□□□□ -1.31
TREM1-202ENST00000334475 TRAV8-2A0A0B4J237 113 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 TRBV7-9A0A0J9YWB2 115 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 M0R2Z0 102 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 OVOL1O14753 267 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 SMAD7O15105 426 aaKnown RBP6.85□□□□□ -1.31
TREM1-202ENST00000334475 OR5AL1P0C617 328 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 ZNF138P52744 262 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 PMCHL1Q16048 86 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 PRSS57Q6UWY2 283 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 MRPL52Q86TS9 123 aaKnown RBP6.85□□□□□ -1.31
TREM1-202ENST00000334475 TEX29Q8N6K0 151 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 FER1L6-AS1Q8NA97 138 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 SPATA3Q8NHX4 192 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 VGLL1Q99990 258 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 NDUFAF3Q9BU61 184 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 CNFNQ9BYD5 112 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 PRO1933Q9H354 126 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 LINC00527Q9UJ94 153 aa6.85□□□□□ -1.31
TREM1-202ENST00000334475 IGHV3OR16-8A0A075B7F1 116 aa6.84□□□□□ -1.31
TREM1-202ENST00000334475 FAM229AH3BQW9 127 aa6.84□□□□□ -1.31
TREM1-202ENST00000334475 TGFAP01135 160 aa6.84□□□□□ -1.31
TREM1-202ENST00000334475 HLA-DMBP28068 263 aa6.84□□□□□ -1.31
TREM1-202ENST00000334475 BLCAPP62952 87 aa6.84□□□□□ -1.31
TREM1-202ENST00000334475 FOXE3Q13461 319 aa6.84□□□□□ -1.31
TREM1-202ENST00000334475 DEFB112Q30KQ8 113 aa6.84□□□□□ -1.31
TREM1-202ENST00000334475 RNASEKQ6P5S7 137 aaKnown RBP6.84□□□□□ -1.31
TREM1-202ENST00000334475 LYZL1Q6UWQ5 148 aa6.84□□□□□ -1.31
TREM1-202ENST00000334475 OR4X2Q8NGF9 303 aa6.84□□□□□ -1.31
TREM1-202ENST00000334475 C16orf92Q96LL3 132 aa6.84□□□□□ -1.31
TREM1-202ENST00000334475 LINC00477Q96M19 166 aa6.84□□□□□ -1.31
TREM1-202ENST00000334475 VAMP8Q9BV40 100 aa6.84□□□□□ -1.31
TREM1-202ENST00000334475 PEF1Q9UBV8 284 aaKnown RBP6.84□□□□□ -1.31
TREM1-202ENST00000334475 VPREB3Q9UKI3 123 aa6.84□□□□□ -1.31
TREM1-202ENST00000334475 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.83□□□□□ -1.32
TREM1-202ENST00000334475 CR1P17927 2039 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 NBEAL1Q6ZS30 2694 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 IGHV7-4-1A0A0J9YVY3 117 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 PRAC2D3DTV9 90 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 LINC00614P0C842 121 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 C3orf79P0CE67 100 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 IGHV4-31P0DP07 118 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 NTF3P20783 257 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 PSMB8P28062 276 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 ZNF80P51504 273 aaPredicted RBP6.83□□□□□ -1.32
TREM1-202ENST00000334475 KRTDAPP60985 99 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 FAM106AQ4KMX7 169 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 Q5PR19 223 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 FAM104BQ5XKR9 115 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 GPHB5Q86YW7 130 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 Q8N976 141 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 Q8TAT8 98 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 URB1-AS1Q96HZ7 61 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 C14orf144Q96I85 54 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 Q96MF0 132 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 TMEM191AQ9H0A3 160 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 AGPAT4-IT1Q9H0P7 198 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 DAZ1Q9NQZ3 744 aaKnown RBP6.83□□□□□ -1.32
TREM1-202ENST00000334475 U3KQK5 164 aa6.83□□□□□ -1.32
TREM1-202ENST00000334475 IGHV3-66A0A0C4DH42 116 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 C20orf202A1L168 122 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 SOCS3O14543 225 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 ZNF207O43670 478 aaKnown RBP6.82□□□□□ -1.32
TREM1-202ENST00000334475 IGHV4-59P01825 116 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 ORM1P02763 201 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 PPBPP02775 128 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 ELANEP08246 267 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 BTF3P20290 206 aaKnown RBP6.82□□□□□ -1.32
TREM1-202ENST00000334475 IGFL4Q6B9Z1 124 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 Q6YL49 198 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 IL17RELQ6ZVW7 336 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 ORMDL3Q8N138 153 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 FAM19A2Q8N3H0 131 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 RNF182Q8N6D2 247 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 MAPK1IP1LQ8NDC0 245 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 LAMTOR2Q9Y2Q5 125 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 UFC1Q9Y3C8 167 aa6.82□□□□□ -1.32
TREM1-202ENST00000334475 C2orf70A6NJV1 201 aa6.81□□□□□ -1.32
TREM1-202ENST00000334475 CRXO43186 299 aaPredicted RBP6.81□□□□□ -1.32
TREM1-202ENST00000334475 TRBV12-3P01733 135 aa6.81□□□□□ -1.32
TREM1-202ENST00000334475 IGHV3-11P01762 117 aa6.81□□□□□ -1.32
TREM1-202ENST00000334475 CACNG7P62955 275 aa6.81□□□□□ -1.32
TREM1-202ENST00000334475 ERCC8Q13216 396 aa6.81□□□□□ -1.32
TREM1-202ENST00000334475 UNQ9165/PRO28630Q6UXU0 137 aa6.81□□□□□ -1.32
TREM1-202ENST00000334475 KLHDC1Q8N7A1 406 aa6.81□□□□□ -1.32
TREM1-202ENST00000334475 ZNF738Q8NE65 137 aa6.81□□□□□ -1.32
TREM1-202ENST00000334475 OR10J6PQ8NGY7 276 aa6.81□□□□□ -1.32
TREM1-202ENST00000334475 TMEM70Q9BUB7 260 aa6.81□□□□□ -1.32
TREM1-202ENST00000334475 KLK15Q9H2R5 256 aa6.81□□□□□ -1.32
TREM1-202ENST00000334475 SMPXQ9UHP9 88 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms