RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 KCNIP3Q9Y2W7 256 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 ALG5Q9Y673 324 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 ZNF407Q9C0G0 2248 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 IGHV3-64A0A075B6Q5 118 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 A0A096LPF7 62 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 IGKV1-6A0A0C4DH72 117 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 TRBV10-1A0A0K0K1A3 114 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 A0A1B0GUV1 79 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 C5orf51A6NDU8 294 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 FAM183AA6NL82 134 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 H7BYZ3 331 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 SDCBPO00560 298 aaPredicted RBP0.91□□□□□ -2.26
LINC00643-201ENST00000334389 GNGT2O14610 69 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 MRPS12O15235 138 aaKnown RBP0.91□□□□□ -2.26
LINC00643-201ENST00000334389 IGKV1D-33P01593 117 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 IGKV1-33P01594 117 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 FCER2P06734 321 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 OR5G3P0C626 314 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 ANXA3P12429 323 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 AREGP15514 252 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 ORM2P19652 201 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 F2RP25116 425 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 ATP6V0CP27449 155 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 SDC2P34741 201 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 FAUP35544 74 aaKnown RBP0.91□□□□□ -2.26
LINC00643-201ENST00000334389 ID1P41134 155 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 SULT1A2P50226 295 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 CAV2P51636 162 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 F2RL1P55085 397 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 KRTAP10-5P60370 271 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 RAB11AP62491 216 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 RHOBP62745 196 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 HIST1H4AP62805 103 aaKnown RBP0.91□□□□□ -2.26
LINC00643-201ENST00000334389 RPL32P62910 135 aaKnown RBP0.91□□□□□ -2.26
LINC00643-201ENST00000334389 CX3CL1P78423 397 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 SCN1BQ07699 218 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 KLRD1Q13241 179 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM183BQ1AE95 376 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 ACTL10Q5JWF8 245 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 GGNBP1Q5YKI7 109 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 MRPL54Q6P161 138 aaKnown RBP0.91□□□□□ -2.26
LINC00643-201ENST00000334389 SFXN4Q6P4A7 337 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 UNQ9165/PRO28630Q6UXU0 137 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 SMIM15Q7Z3B0 74 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM183AQ8IXX5 376 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 C3orf22Q8N5N4 141 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 ZNF383Q8NA42 475 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 OR4C16Q8NGL9 310 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 OR56B4Q8NH76 319 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 NUDCD2Q8WVJ2 157 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 RASL10AQ92737 203 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 FGGYQ96C11 551 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 GPER1Q99527 375 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 ASCL2Q99929 193 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 ATG101Q9BSB4 218 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 RTBDNQ9BSG5 229 aaPredicted RBP0.91□□□□□ -2.26
LINC00643-201ENST00000334389 RSG1Q9BU20 258 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 NMES1Q9C002 83 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM222Q9H0R3 208 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 LYRM2Q9NU23 88 aaPredicted RBP0.91□□□□□ -2.26
LINC00643-201ENST00000334389 TAS2R4Q9NYW5 299 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 GPR132Q9UNW8 380 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 FUT9Q9Y231 359 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 POLR1DQ9Y2S0 133 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 SPTBP11277 2137 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 PROP1O75360 226 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 NDUFB6O95139 128 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 RAB3DO95716 219 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 INSP01308 110 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 MBPP02686 304 aaPredicted RBP0.91□□□□□ -2.26
LINC00643-201ENST00000334389 SERPINE2P07093 398 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 GNAO1P09471 354 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 SAA2P0DJI9 122 aaPredicted RBP0.91□□□□□ -2.26
LINC00643-201ENST00000334389 ASIPP42127 132 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 GPM6AP51674 278 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 SNU13P55769 128 aaKnown RBP0.91□□□□□ -2.26
LINC00643-201ENST00000334389 BRWD1-AS2P59051 145 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 HSPE1P61604 102 aaKnown RBP0.91□□□□□ -2.26
LINC00643-201ENST00000334389 FHL2Q14192 279 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 IZUMO4Q1ZYL8 232 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 PRAMEF6Q5VXH4 476 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM14EPQ6UXP3 125 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 Q6ZN92 141 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 Q6ZTC4 211 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM61Q8N0U2 210 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 LFNGQ8NES3 379 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 BEST4Q8NFU0 473 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 STXBP6Q8NFX7 210 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 OR2AE1Q8NHA4 323 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 CDC26Q8NHZ8 85 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 THEM6Q8WUY1 208 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM170AQ8WVE7 144 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 TNFAIP8L1Q8WVP5 186 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 S100A16Q96FQ6 103 aaKnown RBP0.91□□□□□ -2.26
LINC00643-201ENST00000334389 SLC50A1Q9BRV3 221 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 PSMG3Q9BT73 122 aaPredicted RBP0.91□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM208Q9BTX3 173 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 NAA50Q9GZZ1 169 aaKnown RBP0.91□□□□□ -2.26
LINC00643-201ENST00000334389 RBKSQ9H477 322 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 SMCO4Q9NRQ5 59 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms