RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 PSMB8P28062 276 aa6.65□□□□□ -1.35
LSAMP-201ENST00000333617 BMI1P35226 326 aa6.65□□□□□ -1.35
LSAMP-201ENST00000333617 ERCC8Q13216 396 aa6.65□□□□□ -1.35
LSAMP-201ENST00000333617 RIGQ13278 110 aa6.65□□□□□ -1.35
LSAMP-201ENST00000333617 BORCS7Q96B45 105 aa6.65□□□□□ -1.35
LSAMP-201ENST00000333617 C16orf92Q96LL3 132 aa6.65□□□□□ -1.35
LSAMP-201ENST00000333617 C20orf173Q96LM9 149 aa6.65□□□□□ -1.35
LSAMP-201ENST00000333617 SAMD10Q9BYL1 202 aa6.65□□□□□ -1.35
LSAMP-201ENST00000333617 PEF1Q9UBV8 284 aaKnown RBP6.65□□□□□ -1.35
LSAMP-201ENST00000333617 UNC79Q9P2D8 2635 aa6.64□□□□□ -1.35
LSAMP-201ENST00000333617 A0A1B0GW15 77 aa6.64□□□□□ -1.35
LSAMP-201ENST00000333617 J3QKU1 62 aa6.64□□□□□ -1.35
LSAMP-201ENST00000333617 SMAD7O15105 426 aaKnown RBP6.64□□□□□ -1.35
LSAMP-201ENST00000333617 HOXA3O43365 443 aaPredicted RBP6.64□□□□□ -1.35
LSAMP-201ENST00000333617 RPS20P60866 119 aaKnown RBP6.64□□□□□ -1.35
LSAMP-201ENST00000333617 KLF5Q13887 457 aaPredicted RBP6.64□□□□□ -1.35
LSAMP-201ENST00000333617 TMEM78Q5T7P6 136 aa6.64□□□□□ -1.35
LSAMP-201ENST00000333617 C18orf32Q8TCD1 76 aa6.64□□□□□ -1.35
LSAMP-201ENST00000333617 ALKBH7Q9BT30 221 aaPredicted RBP6.64□□□□□ -1.35
LSAMP-201ENST00000333617 TPPP3Q9BW30 176 aa6.64□□□□□ -1.35
LSAMP-201ENST00000333617 AGRNO00468 2067 aa6.64□□□□□ -1.35
LSAMP-201ENST00000333617 WNK1Q9H4A3 2382 aa6.63□□□□□ -1.35
LSAMP-201ENST00000333617 TMSB15BA0A087X1C1 80 aa6.63□□□□□ -1.35
LSAMP-201ENST00000333617 IGHV7-4-1A0A0J9YVY3 117 aa6.63□□□□□ -1.35
LSAMP-201ENST00000333617 ARMS2P0C7Q2 107 aa6.63□□□□□ -1.35
LSAMP-201ENST00000333617 ZNF80P51504 273 aaPredicted RBP6.63□□□□□ -1.35
LSAMP-201ENST00000333617 SRSF2Q01130 221 aaKnown RBP6.63□□□□□ -1.35
LSAMP-201ENST00000333617 IQCJQ1A5X6 159 aa6.63□□□□□ -1.35
LSAMP-201ENST00000333617 FAM106AQ4KMX7 169 aa6.63□□□□□ -1.35
LSAMP-201ENST00000333617 SIGLECL1Q8N7X8 197 aa6.63□□□□□ -1.35
LSAMP-201ENST00000333617 KCNS1Q96KK3 526 aa6.63□□□□□ -1.35
LSAMP-201ENST00000333617 RCHY1Q96PM5 261 aa6.63□□□□□ -1.35
LSAMP-201ENST00000333617 PRDM13Q9H4Q3 707 aa6.63□□□□□ -1.35
LSAMP-201ENST00000333617 FABP5P3A8MUU1 101 aa6.62□□□□□ -1.35
LSAMP-201ENST00000333617 SCGB1D1O95968 90 aa6.62□□□□□ -1.35
LSAMP-201ENST00000333617 GPX1P07203 203 aa6.62□□□□□ -1.35
LSAMP-201ENST00000333617 ZNF138P52744 262 aa6.62□□□□□ -1.35
LSAMP-201ENST00000333617 C9orf47Q6ZRZ4 202 aa6.62□□□□□ -1.35
LSAMP-201ENST00000333617 IL17RELQ6ZVW7 336 aa6.62□□□□□ -1.35
LSAMP-201ENST00000333617 GPHB5Q86YW7 130 aa6.62□□□□□ -1.35
LSAMP-201ENST00000333617 GATD1Q8NB37 220 aa6.62□□□□□ -1.35
LSAMP-201ENST00000333617 ZNF738Q8NE65 137 aa6.62□□□□□ -1.35
LSAMP-201ENST00000333617 RHPN1-AS1Q9BWJ2 59 aa6.62□□□□□ -1.35
LSAMP-201ENST00000333617 AGPAT4-IT1Q9H0P7 198 aa6.62□□□□□ -1.35
LSAMP-201ENST00000333617 ZNF702PQ9H963 129 aa6.62□□□□□ -1.35
LSAMP-201ENST00000333617 DAZ1Q9NQZ3 744 aaKnown RBP6.62□□□□□ -1.35
LSAMP-201ENST00000333617 FLNBO75369 2602 aaKnown RBP6.62□□□□□ -1.35
LSAMP-201ENST00000333617 LOC102724200A0A096LPH7 203 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-201ENST00000333617 K7EMT4 169 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 ORM1P02763 201 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 PMCHP20382 165 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 AMTP48728 403 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 RPL11P62913 178 aaKnown RBP6.61□□□□□ -1.35
LSAMP-201ENST00000333617 FOXE3Q13461 319 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 TM4SF20Q53R12 229 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 PRR31Q5SQ13 230 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 HIST2H2BCQ6DN03 193 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 C10orf99Q6UWK7 81 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 LYZL1Q6UWQ5 148 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 Q6ZWC4 215 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 TEX29Q8N6K0 151 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 NRN1Q9NPD7 142 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 UFC1Q9Y3C8 167 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 SETXQ7Z333 2677 aaKnown RBP6.61□□□□□ -1.35
LSAMP-201ENST00000333617 SOCS3O14543 225 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 OVOL1O14753 267 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 ZNF324O75467 553 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-201ENST00000333617 ELANEP08246 267 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 MTORP42345 2549 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 HIST1H1AQ02539 215 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-201ENST00000333617 ANK3Q12955 4377 aaKnown RBP6.61□□□□□ -1.35
LSAMP-201ENST00000333617 WFDC11Q8NEX6 87 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 SETD2Q9BYW2 2564 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-201ENST00000333617 PPP1R14DQ9NXH3 145 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 SMPXQ9UHP9 88 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 NAGKQ9UJ70 344 aa6.61□□□□□ -1.35
LSAMP-201ENST00000333617 LINC00587B1AMM8 73 aa6.6□□□□□ -1.35
LSAMP-201ENST00000333617 TSTD3H0UI37 97 aa6.6□□□□□ -1.35
LSAMP-201ENST00000333617 CTRLP40313 264 aa6.6□□□□□ -1.35
LSAMP-201ENST00000333617 PKIAP61925 76 aa6.6□□□□□ -1.35
LSAMP-201ENST00000333617 NIT1Q86X76 327 aa6.6□□□□□ -1.35
LSAMP-201ENST00000333617 FER1L6-AS1Q8NA97 138 aa6.6□□□□□ -1.35
LSAMP-201ENST00000333617 OR10J6PQ8NGY7 276 aa6.6□□□□□ -1.35
LSAMP-201ENST00000333617 LINC00477Q96M19 166 aa6.6□□□□□ -1.35
LSAMP-201ENST00000333617 LENEPQ9Y5L5 61 aa6.6□□□□□ -1.35
LSAMP-201ENST00000333617 IGKV3-7A0A075B6H7 116 aa6.59□□□□□ -1.35
LSAMP-201ENST00000333617 HSBP1O75506 76 aa6.59□□□□□ -1.35
LSAMP-201ENST00000333617 LGALS1P09382 135 aaKnown RBP6.59□□□□□ -1.35
LSAMP-201ENST00000333617 IGLC6P0CF74 106 aa6.59□□□□□ -1.35
LSAMP-201ENST00000333617 ZNF705DP0CH99 300 aaPredicted RBP6.59□□□□□ -1.35
LSAMP-201ENST00000333617 ZNF705BP0CI00 300 aaPredicted RBP6.59□□□□□ -1.35
LSAMP-201ENST00000333617 NTF3P20783 257 aa6.59□□□□□ -1.35
LSAMP-201ENST00000333617 SAMD13Q5VXD3 122 aa6.59□□□□□ -1.35
LSAMP-201ENST00000333617 RNASEKQ6P5S7 137 aaKnown RBP6.59□□□□□ -1.35
LSAMP-201ENST00000333617 ZNF493Q6ZR52 646 aa6.59□□□□□ -1.35
LSAMP-201ENST00000333617 MYOZ3Q8TDC0 251 aa6.59□□□□□ -1.35
LSAMP-201ENST00000333617 UBE2E2Q96LR5 201 aa6.59□□□□□ -1.35
LSAMP-201ENST00000333617 EDN2P20800 178 aa6.58□□□□□ -1.36
LSAMP-201ENST00000333617 KRTDAPP60985 99 aa6.58□□□□□ -1.36
LSAMP-201ENST00000333617 SSTP61278 116 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms