RNA–Protein interactions for RNA: ENST00000331462.5

HOXD1-201, Transcript of homeobox D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD1, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1-201ENST00000331462 RAXQ9Y2V3 346 aa17.29■□□□□ 0.36
HOXD1-201ENST00000331462 IGHV3-66A0A0C4DH42 116 aa17.29■□□□□ 0.36
HOXD1-201ENST00000331462 NPFFO15130 113 aa17.29■□□□□ 0.36
HOXD1-201ENST00000331462 C19orf54Q5BKX5 351 aa17.29■□□□□ 0.36
HOXD1-201ENST00000331462 PCP2Q8IVA1 136 aa17.29■□□□□ 0.36
HOXD1-201ENST00000331462 C18orf15Q96N68 181 aa17.29■□□□□ 0.36
HOXD1-201ENST00000331462 SMPXQ9UHP9 88 aa17.29■□□□□ 0.36
HOXD1-201ENST00000331462 HHLA3Q9XRX5 114 aa17.29■□□□□ 0.36
HOXD1-201ENST00000331462 LINC01548A6NM66 108 aa17.28■□□□□ 0.36
HOXD1-201ENST00000331462 EVI2AP22794 236 aa17.28■□□□□ 0.36
HOXD1-201ENST00000331462 UFSP1Q6NVU6 142 aa17.28■□□□□ 0.36
HOXD1-201ENST00000331462 OR2K2Q8NGT1 345 aa17.28■□□□□ 0.36
HOXD1-201ENST00000331462 ATP5LO75964 103 aa17.28■□□□□ 0.36
HOXD1-201ENST00000331462 PPIFP30405 207 aaKnown RBP17.28■□□□□ 0.36
HOXD1-201ENST00000331462 NMUP48645 174 aa17.28■□□□□ 0.36
HOXD1-201ENST00000331462 CRIP2P52943 208 aaPredicted RBP17.28■□□□□ 0.36
HOXD1-201ENST00000331462 WFDC3Q8IUB2 231 aa17.28■□□□□ 0.36
HOXD1-201ENST00000331462 HIGD1BQ9P298 99 aa17.28■□□□□ 0.36
HOXD1-201ENST00000331462 OCIAD2Q56VL3 154 aa17.27■□□□□ 0.36
HOXD1-201ENST00000331462 NRACQ8N912 160 aa17.27■□□□□ 0.36
HOXD1-201ENST00000331462 LENEPQ9Y5L5 61 aa17.27■□□□□ 0.36
HOXD1-201ENST00000331462 TRGV3P03979 118 aa17.26■□□□□ 0.35
HOXD1-201ENST00000331462 HLA-DRB4P13762 266 aa17.26■□□□□ 0.35
HOXD1-201ENST00000331462 GATA1P15976 413 aaPredicted RBP17.26■□□□□ 0.35
HOXD1-201ENST00000331462 UQCRFS1P47985 274 aa17.26■□□□□ 0.35
HOXD1-201ENST00000331462 SMIM15Q7Z3B0 74 aa17.26■□□□□ 0.35
HOXD1-201ENST00000331462 TMEM158Q8WZ71 300 aa17.26■□□□□ 0.35
HOXD1-201ENST00000331462 HLA-DRB4X5D2U9 266 aa17.26■□□□□ 0.35
HOXD1-201ENST00000331462 FAM223BA6NKX1 122 aa17.26■□□□□ 0.35
HOXD1-201ENST00000331462 ATP5G2Q06055 141 aa17.26■□□□□ 0.35
HOXD1-201ENST00000331462 KIR3DS1Q14943 382 aa17.26■□□□□ 0.35
HOXD1-201ENST00000331462 FAM223AQ8IWN6 122 aa17.26■□□□□ 0.35
HOXD1-201ENST00000331462 GAGE12BA1L429 117 aa17.25■□□□□ 0.35
HOXD1-201ENST00000331462 IGHV3OR16-13A0A075B7E8 117 aa17.24■□□□□ 0.35
HOXD1-201ENST00000331462 IGHV3-74A0A0B4J1X5 117 aa17.24■□□□□ 0.35
HOXD1-201ENST00000331462 IGKCP01834 107 aa17.24■□□□□ 0.35
HOXD1-201ENST00000331462 C9orf139Q6ZV77 190 aa17.24■□□□□ 0.35
HOXD1-201ENST00000331462 GTF2H5Q6ZYL4 71 aa17.24■□□□□ 0.35
HOXD1-201ENST00000331462 GLMPQ8WWB7 406 aa17.24■□□□□ 0.35
HOXD1-201ENST00000331462 ITLN2Q8WWU7 325 aaPredicted RBP17.24■□□□□ 0.35
HOXD1-201ENST00000331462 JMJD8Q96S16 334 aa17.24■□□□□ 0.35
HOXD1-201ENST00000331462 BPESC1Q9GZL8 116 aa17.24■□□□□ 0.35
HOXD1-201ENST00000331462 UBTD1Q9HAC8 227 aa17.24■□□□□ 0.35
HOXD1-201ENST00000331462 GAGE10A6NGK3 116 aa17.24■□□□□ 0.35
HOXD1-201ENST00000331462 MOB4Q9Y3A3 225 aa17.24■□□□□ 0.35
HOXD1-201ENST00000331462 PRSS1P07477 247 aa17.23■□□□□ 0.35
HOXD1-201ENST00000331462 AP1S3Q96PC3 154 aa17.23■□□□□ 0.35
HOXD1-201ENST00000331462 WNK2Q9Y3S1 2297 aa17.23■□□□□ 0.35
HOXD1-201ENST00000331462 DPM2O94777 84 aa17.22■□□□□ 0.35
HOXD1-201ENST00000331462 TCTAP57738 103 aa17.22■□□□□ 0.35
HOXD1-201ENST00000331462 IGKV2D-26A0A0A0MRZ7 120 aa17.22■□□□□ 0.35
HOXD1-201ENST00000331462 IGHV3-49A0A0A0MS15 119 aa17.22■□□□□ 0.35
HOXD1-201ENST00000331462 TRAV41A0A0B4J266 112 aa17.22■□□□□ 0.35
HOXD1-201ENST00000331462 ZNF207O43670 478 aaKnown RBP17.22■□□□□ 0.35
HOXD1-201ENST00000331462 SMIM17P0DL12 118 aa17.22■□□□□ 0.35
HOXD1-201ENST00000331462 LAGE3Q14657 143 aa17.22■□□□□ 0.35
HOXD1-201ENST00000331462 FOXC2Q99958 501 aa17.22■□□□□ 0.35
HOXD1-201ENST00000331462 A0A0G2JLM5 398 aa17.21■□□□□ 0.35
HOXD1-201ENST00000331462 K7EP34 96 aa17.21■□□□□ 0.35
HOXD1-201ENST00000331462 MRAP2Q96G30 205 aa17.21■□□□□ 0.35
HOXD1-201ENST00000331462 C16orf92Q96LL3 132 aa17.2■□□□□ 0.34
HOXD1-201ENST00000331462 H3BUT2 72 aa17.19■□□□□ 0.34
HOXD1-201ENST00000331462 PRR9Q5T870 116 aa17.19■□□□□ 0.34
HOXD1-201ENST00000331462 SPANXN1Q5VSR9 72 aa17.19■□□□□ 0.34
HOXD1-201ENST00000331462 UFC1Q9Y3C8 167 aa17.19■□□□□ 0.34
HOXD1-201ENST00000331462 RELNP78509 3460 aa17.18■□□□□ 0.34
HOXD1-201ENST00000331462 BRI3O95415 125 aa17.18■□□□□ 0.34
HOXD1-201ENST00000331462 C21orf62-AS1Q17RA5 79 aa17.18■□□□□ 0.34
HOXD1-201ENST00000331462 C20orf173Q96LM9 149 aa17.18■□□□□ 0.34
HOXD1-201ENST00000331462 TMEM8BA6NDV4 472 aa17.17■□□□□ 0.34
HOXD1-201ENST00000331462 MYOZ3Q8TDC0 251 aa17.17■□□□□ 0.34
HOXD1-201ENST00000331462 LINC00477Q96M19 166 aa17.17■□□□□ 0.34
HOXD1-201ENST00000331462 K7ERU9 68 aa17.17■□□□□ 0.34
HOXD1-201ENST00000331462 SOCS3O14543 225 aa17.17■□□□□ 0.34
HOXD1-201ENST00000331462 SRSF1Q07955 248 aaKnown RBP eCLIP17.17■□□□□ 0.34
HOXD1-201ENST00000331462 RNF151Q2KHN1 245 aa17.17■□□□□ 0.34
HOXD1-201ENST00000331462 CHAC1Q9BUX1 264 aa17.17■□□□□ 0.34
HOXD1-201ENST00000331462 TRAV26-2A0A0B4J265 109 aa17.16■□□□□ 0.34
HOXD1-201ENST00000331462 H3BVH4 76 aa17.16■□□□□ 0.34
HOXD1-201ENST00000331462 NDUFA4O00483 81 aa17.16■□□□□ 0.34
HOXD1-201ENST00000331462 ARL3P36405 182 aa17.16■□□□□ 0.34
HOXD1-201ENST00000331462 ZC2HC1BQ5TFG8 222 aa17.16■□□□□ 0.34
HOXD1-201ENST00000331462 Q6ZQT7 251 aa17.16■□□□□ 0.34
HOXD1-201ENST00000331462 TMEM219Q86XT9 240 aa17.16■□□□□ 0.34
HOXD1-201ENST00000331462 GPHB5Q86YW7 130 aa17.16■□□□□ 0.34
HOXD1-201ENST00000331462 ZFAND2AQ8N6M9 145 aa17.16■□□□□ 0.34
HOXD1-201ENST00000331462 IGF2RP11717 2491 aa17.15■□□□□ 0.34
HOXD1-201ENST00000331462 A0A087WX48 190 aa17.15■□□□□ 0.34
HOXD1-201ENST00000331462 A0A1W2PPM0 123 aa17.15■□□□□ 0.34
HOXD1-201ENST00000331462 SMIM2Q9BVW6 85 aa17.15■□□□□ 0.34
HOXD1-201ENST00000331462 NCOR2Q9Y618 2525 aa17.15■□□□□ 0.34
HOXD1-201ENST00000331462 OVOL1O14753 267 aa17.15■□□□□ 0.34
HOXD1-201ENST00000331462 IGF1P05019 195 aa17.15■□□□□ 0.34
HOXD1-201ENST00000331462 OR5A1Q8NGJ0 315 aa17.15■□□□□ 0.34
HOXD1-201ENST00000331462 MRPL35Q9NZE8 188 aaKnown RBP17.15■□□□□ 0.34
HOXD1-201ENST00000331462 NBASA2RRP1 2371 aa17.14■□□□□ 0.33
HOXD1-201ENST00000331462 CSMD1Q96PZ7 3565 aa17.14■□□□□ 0.33
HOXD1-201ENST00000331462 TRBV25-1A0A075B6N4 114 aa17.14■□□□□ 0.33
HOXD1-201ENST00000331462 IGHV1-69DA0A0B4J2H0 117 aa17.14■□□□□ 0.33
HOXD1-201ENST00000331462 IGHV1-69P01742 117 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms