RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 M0QZK8 103 aa11.34□□□□□ -0.59
CLCNKA-201ENST00000331433 NDUFA4O00483 81 aa11.34□□□□□ -0.59
CLCNKA-201ENST00000331433 MAPK1IP1LQ8NDC0 245 aa11.34□□□□□ -0.59
CLCNKA-201ENST00000331433 OR4X2Q8NGF9 303 aa11.34□□□□□ -0.59
CLCNKA-201ENST00000331433 MRPL53Q96EL3 112 aaKnown RBP11.34□□□□□ -0.59
CLCNKA-201ENST00000331433 MAP1LC3CQ9BXW4 147 aa11.34□□□□□ -0.59
CLCNKA-201ENST00000331433 SELENOKQ9Y6D0 94 aa11.34□□□□□ -0.59
CLCNKA-201ENST00000331433 CKS2P33552 79 aa11.34□□□□□ -0.59
CLCNKA-201ENST00000331433 HNRNPA3P51991 378 aaKnown RBP11.34□□□□□ -0.59
CLCNKA-201ENST00000331433 DMRTA1Q5VZB9 504 aa11.34□□□□□ -0.59
CLCNKA-201ENST00000331433 MRPL52Q86TS9 123 aaKnown RBP11.34□□□□□ -0.59
CLCNKA-201ENST00000331433 GPHB5Q86YW7 130 aa11.34□□□□□ -0.59
CLCNKA-201ENST00000331433 USMG5Q96IX5 58 aa11.34□□□□□ -0.59
CLCNKA-201ENST00000331433 PMCHL2Q9BQD1 86 aa11.34□□□□□ -0.59
CLCNKA-201ENST00000331433 HSPB8Q9UJY1 196 aa11.34□□□□□ -0.59
CLCNKA-201ENST00000331433 NPYP01303 97 aa11.33□□□□□ -0.6
CLCNKA-201ENST00000331433 FXYD7P58549 80 aa11.33□□□□□ -0.6
CLCNKA-201ENST00000331433 FOXE3Q13461 319 aa11.33□□□□□ -0.6
CLCNKA-201ENST00000331433 TP73-AS1Q9UF72 201 aa11.33□□□□□ -0.6
CLCNKA-201ENST00000331433 ABCA12Q86UK0 2595 aa11.33□□□□□ -0.6
CLCNKA-201ENST00000331433 hDV102S1A0JD36 115 aa11.33□□□□□ -0.6
CLCNKA-201ENST00000331433 H3BUA1 57 aa11.33□□□□□ -0.6
CLCNKA-201ENST00000331433 DEFB1P60022 68 aa11.33□□□□□ -0.6
CLCNKA-201ENST00000331433 C9orf47Q6ZRZ4 202 aa11.33□□□□□ -0.6
CLCNKA-201ENST00000331433 ZNF738Q8NE65 137 aa11.33□□□□□ -0.6
CLCNKA-201ENST00000331433 CNFNQ9BYD5 112 aa11.33□□□□□ -0.6
CLCNKA-201ENST00000331433 DOPEY2Q9Y3R5 2298 aa11.33□□□□□ -0.6
CLCNKA-201ENST00000331433 A0A096LNJ9 63 aa11.32□□□□□ -0.6
CLCNKA-201ENST00000331433 C20orf202A1L168 122 aa11.32□□□□□ -0.6
CLCNKA-201ENST00000331433 PRSS57Q6UWY2 283 aa11.32□□□□□ -0.6
CLCNKA-201ENST00000331433 OR10AG1Q8NH19 301 aa11.32□□□□□ -0.6
CLCNKA-201ENST00000331433 TMEM191AQ9H0A3 160 aa11.32□□□□□ -0.6
CLCNKA-201ENST00000331433 IGKV3-7A0A075B6H7 116 aa11.32□□□□□ -0.6
CLCNKA-201ENST00000331433 A1L4Q6 167 aa11.32□□□□□ -0.6
CLCNKA-201ENST00000331433 GAS8-AS1O95177 125 aa11.32□□□□□ -0.6
CLCNKA-201ENST00000331433 IGHV4-59P01825 116 aa11.32□□□□□ -0.6
CLCNKA-201ENST00000331433 HIST1H1AQ02539 215 aaPredicted RBP11.32□□□□□ -0.6
CLCNKA-201ENST00000331433 C9orf139Q6ZV77 190 aa11.32□□□□□ -0.6
CLCNKA-201ENST00000331433 RNF185Q96GF1 192 aa11.32□□□□□ -0.6
CLCNKA-201ENST00000331433 ZNF747Q9BV97 191 aa11.32□□□□□ -0.6
CLCNKA-201ENST00000331433 J3KRW8 73 aa11.31□□□□□ -0.6
CLCNKA-201ENST00000331433 TCAPO15273 167 aa11.31□□□□□ -0.6
CLCNKA-201ENST00000331433 BRI3O95415 125 aa11.31□□□□□ -0.6
CLCNKA-201ENST00000331433 IGLV1-40P01703 118 aa11.31□□□□□ -0.6
CLCNKA-201ENST00000331433 RPLP1P05386 114 aaKnown RBP11.31□□□□□ -0.6
CLCNKA-201ENST00000331433 TSPOP30536 169 aa11.31□□□□□ -0.6
CLCNKA-201ENST00000331433 DSCR9P59020 149 aa11.31□□□□□ -0.6
CLCNKA-201ENST00000331433 RPL11P62913 178 aaKnown RBP11.31□□□□□ -0.6
CLCNKA-201ENST00000331433 PRR9Q5T870 116 aa11.31□□□□□ -0.6
CLCNKA-201ENST00000331433 PET117Q6UWS5 81 aa11.31□□□□□ -0.6
CLCNKA-201ENST00000331433 NPFFR1Q9GZQ6 430 aa11.31□□□□□ -0.6
CLCNKA-201ENST00000331433 KMT2BQ9UMN6 2715 aaPredicted RBP11.31□□□□□ -0.6
CLCNKA-201ENST00000331433 DEFB112Q30KQ8 113 aa11.31□□□□□ -0.6
CLCNKA-201ENST00000331433 TM4SF20Q53R12 229 aa11.31□□□□□ -0.6
CLCNKA-201ENST00000331433 UBR5O95071 2799 aaPredicted RBP11.31□□□□□ -0.6
CLCNKA-201ENST00000331433 SLC25A16P16260 332 aa11.3□□□□□ -0.6
CLCNKA-201ENST00000331433 CYB5R2Q6BCY4 276 aa11.3□□□□□ -0.6
CLCNKA-201ENST00000331433 SOCS3O14543 225 aa11.3□□□□□ -0.6
CLCNKA-201ENST00000331433 CFHR3Q02985 330 aa11.3□□□□□ -0.6
CLCNKA-201ENST00000331433 LINC01356Q8N9X3 169 aa11.3□□□□□ -0.6
CLCNKA-201ENST00000331433 A0A096LNT2 108 aa11.29□□□□□ -0.6
CLCNKA-201ENST00000331433 EDN2P20800 178 aa11.29□□□□□ -0.6
CLCNKA-201ENST00000331433 GATA3P23771 443 aa11.29□□□□□ -0.6
CLCNKA-201ENST00000331433 TFPI2P48307 235 aa11.29□□□□□ -0.6
CLCNKA-201ENST00000331433 LAMTOR2Q9Y2Q5 125 aa11.29□□□□□ -0.6
CLCNKA-201ENST00000331433 A0A0G2JLM5 398 aa11.29□□□□□ -0.6
CLCNKA-201ENST00000331433 TGFAP01135 160 aa11.29□□□□□ -0.6
CLCNKA-201ENST00000331433 G0S2P27469 103 aa11.29□□□□□ -0.6
CLCNKA-201ENST00000331433 SRSF1Q07955 248 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLCNKA-201ENST00000331433 C10orf99Q6UWK7 81 aa11.29□□□□□ -0.6
CLCNKA-201ENST00000331433 OR8A1Q8NGG7 326 aa11.29□□□□□ -0.6
CLCNKA-201ENST00000331433 RHPN1-AS1Q9BWJ2 59 aa11.29□□□□□ -0.6
CLCNKA-201ENST00000331433 NAV2Q8IVL1 2488 aa11.29□□□□□ -0.6
CLCNKA-201ENST00000331433 MXRA5Q9NR99 2828 aa11.29□□□□□ -0.6
CLCNKA-201ENST00000331433 IGHV7-4-1A0A0J9YVY3 117 aa11.28□□□□□ -0.6
CLCNKA-201ENST00000331433 COX6B1P14854 86 aa11.28□□□□□ -0.6
CLCNKA-201ENST00000331433 LINC01545Q5VT33 79 aa11.28□□□□□ -0.6
CLCNKA-201ENST00000331433 F6UB75 175 aa11.28□□□□□ -0.6
CLCNKA-201ENST00000331433 GATA1P15976 413 aaPredicted RBP11.28□□□□□ -0.6
CLCNKA-201ENST00000331433 EVI2AP22794 236 aa11.28□□□□□ -0.6
CLCNKA-201ENST00000331433 PPP1R14DQ9NXH3 145 aa11.28□□□□□ -0.6
CLCNKA-201ENST00000331433 SRD5A1P18405 259 aa11.27□□□□□ -0.61
CLCNKA-201ENST00000331433 STPG4Q8N801 248 aa11.27□□□□□ -0.61
CLCNKA-201ENST00000331433 ST20Q9HBF5 79 aa11.27□□□□□ -0.61
CLCNKA-201ENST00000331433 TCF21O43680 179 aa11.27□□□□□ -0.61
CLCNKA-201ENST00000331433 HINT1P49773 126 aaPredicted RBP11.27□□□□□ -0.61
CLCNKA-201ENST00000331433 OR10J6PQ8NGY7 276 aa11.27□□□□□ -0.61
CLCNKA-201ENST00000331433 DAZ1Q9NQZ3 744 aaKnown RBP11.27□□□□□ -0.61
CLCNKA-201ENST00000331433 CREBBPQ92793 2442 aa11.26□□□□□ -0.61
CLCNKA-201ENST00000331433 HBDP02042 147 aa11.26□□□□□ -0.61
CLCNKA-201ENST00000331433 ZFAND2AQ8N6M9 145 aa11.26□□□□□ -0.61
CLCNKA-201ENST00000331433 MRPS16Q9Y3D3 137 aaKnown RBP11.26□□□□□ -0.61
CLCNKA-201ENST00000331433 HSBP1L1C9JCN9 74 aa11.26□□□□□ -0.61
CLCNKA-201ENST00000331433 H3BVH4 76 aa11.26□□□□□ -0.61
CLCNKA-201ENST00000331433 COL5A1-AS1Q5SY13 56 aa11.26□□□□□ -0.61
CLCNKA-201ENST00000331433 RNF223E7ERA6 249 aa11.25□□□□□ -0.61
CLCNKA-201ENST00000331433 TNFRSF6BO95407 300 aa11.25□□□□□ -0.61
CLCNKA-201ENST00000331433 PPBPP02775 128 aa11.25□□□□□ -0.61
CLCNKA-201ENST00000331433 ZNF25P17030 456 aaPredicted RBP11.25□□□□□ -0.61
CLCNKA-201ENST00000331433 KRTAP10-9P60411 292 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms