RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SPOCK3Q9BQ16 436 aa11.11□□□□□ -0.63
TPM3-206ENST00000330188 PMCHL2Q9BQD1 86 aa11.11□□□□□ -0.63
TPM3-206ENST00000330188 COL12A1Q99715 3063 aa11.11□□□□□ -0.63
TPM3-206ENST00000330188 B4DSR2 109 aa11.11□□□□□ -0.63
TPM3-206ENST00000330188 CFAP46Q8IYW2 2715 aa11.1□□□□□ -0.63
TPM3-206ENST00000330188 FOXE3Q13461 319 aa11.1□□□□□ -0.63
TPM3-206ENST00000330188 PRSS57Q6UWY2 283 aa11.1□□□□□ -0.63
TPM3-206ENST00000330188 TP73-AS1Q9UF72 201 aa11.1□□□□□ -0.63
TPM3-206ENST00000330188 SPTAN1Q13813 2472 aaKnown RBP11.1□□□□□ -0.63
TPM3-206ENST00000330188 HSBP1L1C9JCN9 74 aa11.09□□□□□ -0.63
TPM3-206ENST00000330188 SOCS3O14543 225 aa11.09□□□□□ -0.63
TPM3-206ENST00000330188 PF4V1P10720 104 aa11.09□□□□□ -0.63
TPM3-206ENST00000330188 Q6ZQT7 251 aa11.09□□□□□ -0.63
TPM3-206ENST00000330188 NRGNQ92686 78 aa11.09□□□□□ -0.63
TPM3-206ENST00000330188 IGHV7-4-1A0A0J9YVY3 117 aa11.09□□□□□ -0.63
TPM3-206ENST00000330188 GAS8-AS1O95177 125 aa11.09□□□□□ -0.63
TPM3-206ENST00000330188 IGLV1-40P01703 118 aa11.09□□□□□ -0.63
TPM3-206ENST00000330188 PPBPP02775 128 aa11.09□□□□□ -0.63
TPM3-206ENST00000330188 HINT1P49773 126 aaPredicted RBP11.09□□□□□ -0.63
TPM3-206ENST00000330188 LCNL1Q6ZST4 164 aa11.09□□□□□ -0.63
TPM3-206ENST00000330188 ZNF738Q8NE65 137 aa11.09□□□□□ -0.63
TPM3-206ENST00000330188 OR4X2Q8NGF9 303 aa11.09□□□□□ -0.63
TPM3-206ENST00000330188 TMEM208Q9BTX3 173 aa11.09□□□□□ -0.63
TPM3-206ENST00000330188 SCRT2Q9NQ03 307 aa11.09□□□□□ -0.63
TPM3-206ENST00000330188 TCF21O43680 179 aa11.08□□□□□ -0.64
TPM3-206ENST00000330188 HBDP02042 147 aa11.08□□□□□ -0.64
TPM3-206ENST00000330188 FXYD7P58549 80 aa11.08□□□□□ -0.64
TPM3-206ENST00000330188 PRR9Q5T870 116 aa11.08□□□□□ -0.64
TPM3-206ENST00000330188 MS4A6AQ9H2W1 248 aa11.08□□□□□ -0.64
TPM3-206ENST00000330188 DOPEY1Q5JWR5 2465 aa11.08□□□□□ -0.64
TPM3-206ENST00000330188 DSCR9P59020 149 aa11.08□□□□□ -0.64
TPM3-206ENST00000330188 CFHR3Q02985 330 aa11.08□□□□□ -0.64
TPM3-206ENST00000330188 OR8A1Q8NGG7 326 aa11.08□□□□□ -0.64
TPM3-206ENST00000330188 NPFFR1Q9GZQ6 430 aa11.08□□□□□ -0.64
TPM3-206ENST00000330188 LENEPQ9Y5L5 61 aa11.08□□□□□ -0.64
TPM3-206ENST00000330188 MAP1LC3AQ9H492 121 aa11.07□□□□□ -0.64
TPM3-206ENST00000330188 LINC01546A6NGU7 62 aa11.06□□□□□ -0.64
TPM3-206ENST00000330188 DLEU1O43261 78 aa11.06□□□□□ -0.64
TPM3-206ENST00000330188 GATA3P23771 443 aa11.06□□□□□ -0.64
TPM3-206ENST00000330188 SLC25A34Q6PIV7 304 aa11.06□□□□□ -0.64
TPM3-206ENST00000330188 IGSF10Q6WRI0 2623 aa11.06□□□□□ -0.64
TPM3-206ENST00000330188 A0A0G2JLM5 398 aa11.06□□□□□ -0.64
TPM3-206ENST00000330188 TNFRSF6BO95407 300 aa11.06□□□□□ -0.64
TPM3-206ENST00000330188 LINC00477Q96M19 166 aa11.06□□□□□ -0.64
TPM3-206ENST00000330188 OVOL1O14753 267 aa11.05□□□□□ -0.64
TPM3-206ENST00000330188 SNAI2O43623 268 aa11.05□□□□□ -0.64
TPM3-206ENST00000330188 SLC25A16P16260 332 aa11.05□□□□□ -0.64
TPM3-206ENST00000330188 GAGE1Q13065 139 aa11.05□□□□□ -0.64
TPM3-206ENST00000330188 LGALS9BQ3B8N2 356 aa11.05□□□□□ -0.64
TPM3-206ENST00000330188 LGALS9CQ6DKI2 356 aa11.05□□□□□ -0.64
TPM3-206ENST00000330188 GATA1P15976 413 aaPredicted RBP11.05□□□□□ -0.64
TPM3-206ENST00000330188 EVI2AP22794 236 aa11.05□□□□□ -0.64
TPM3-206ENST00000330188 ZFAND2AQ8N6M9 145 aa11.05□□□□□ -0.64
TPM3-206ENST00000330188 OR10J6PQ8NGY7 276 aa11.05□□□□□ -0.64
TPM3-206ENST00000330188 GOLT1BQ9Y3E0 138 aa11.05□□□□□ -0.64
TPM3-206ENST00000330188 IGHV4-4A0A075B6R2 117 aa11.04□□□□□ -0.64
TPM3-206ENST00000330188 A0A096LNT2 108 aa11.04□□□□□ -0.64
TPM3-206ENST00000330188 DEFB1P60022 68 aa11.04□□□□□ -0.64
TPM3-206ENST00000330188 TMEM95Q3KNT9 176 aa11.04□□□□□ -0.64
TPM3-206ENST00000330188 TM4SF20Q53R12 229 aa11.04□□□□□ -0.64
TPM3-206ENST00000330188 IFI27L1Q96BM0 104 aa11.04□□□□□ -0.64
TPM3-206ENST00000330188 RHPN1-AS1Q9BWJ2 59 aa11.04□□□□□ -0.64
TPM3-206ENST00000330188 ZNF580Q9UK33 172 aa11.04□□□□□ -0.64
TPM3-206ENST00000330188 CACNG7P62955 275 aa11.03□□□□□ -0.64
TPM3-206ENST00000330188 LINC01356Q8N9X3 169 aa11.03□□□□□ -0.64
TPM3-206ENST00000330188 NXT2Q9NPJ8 142 aaKnown RBP11.03□□□□□ -0.64
TPM3-206ENST00000330188 USP9XQ93008 2570 aaPredicted RBP11.03□□□□□ -0.64
TPM3-206ENST00000330188 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.03□□□□□ -0.648e-7■■■■□ 20.9
TPM3-206ENST00000330188 SPG11Q96JI7 2443 aa11.03□□□□□ -0.64
TPM3-206ENST00000330188 H3BVH4 76 aa11.03□□□□□ -0.64
TPM3-206ENST00000330188 J3KRW8 73 aa11.03□□□□□ -0.64
TPM3-206ENST00000330188 IGHV4-59P01825 116 aa11.03□□□□□ -0.64
TPM3-206ENST00000330188 RPL11P62913 178 aaKnown RBP11.03□□□□□ -0.64
TPM3-206ENST00000330188 DEFB112Q30KQ8 113 aa11.03□□□□□ -0.64
TPM3-206ENST00000330188 NPSP0C0P6 89 aa11.02□□□□□ -0.64
TPM3-206ENST00000330188 SPANXN1Q5VSR9 72 aa11.02□□□□□ -0.64
TPM3-206ENST00000330188 SMIM15Q7Z3B0 74 aa11.02□□□□□ -0.64
TPM3-206ENST00000330188 FAM19A4Q96LR4 140 aa11.02□□□□□ -0.64
TPM3-206ENST00000330188 DAZ1Q9NQZ3 744 aaKnown RBP11.02□□□□□ -0.64
TPM3-206ENST00000330188 FLNCQ14315 2725 aa11.02□□□□□ -0.65
TPM3-206ENST00000330188 IGKV3-7A0A075B6H7 116 aa11.02□□□□□ -0.65
TPM3-206ENST00000330188 PRB1P04280 392 aa11.02□□□□□ -0.65
TPM3-206ENST00000330188 COX8AP10176 69 aa11.02□□□□□ -0.65
TPM3-206ENST00000330188 EDN2P20800 178 aa11.02□□□□□ -0.65
TPM3-206ENST00000330188 PEF1Q9UBV8 284 aaKnown RBP11.02□□□□□ -0.65
TPM3-206ENST00000330188 UFC1Q9Y3C8 167 aa11.02□□□□□ -0.65
TPM3-206ENST00000330188 IGLV2-18A0A075B6J9 118 aa11.01□□□□□ -0.65
TPM3-206ENST00000330188 TRAV21A0A0B4J279 112 aa11.01□□□□□ -0.65
TPM3-206ENST00000330188 F6UB75 175 aa11.01□□□□□ -0.65
TPM3-206ENST00000330188 PSMB8P28062 276 aa11.01□□□□□ -0.65
TPM3-206ENST00000330188 FCER1GP30273 86 aa11.01□□□□□ -0.65
TPM3-206ENST00000330188 MPV17L2Q567V2 206 aa11.01□□□□□ -0.65
TPM3-206ENST00000330188 WFDC3Q8IUB2 231 aa11.01□□□□□ -0.65
TPM3-206ENST00000330188 OR2K2Q8NGT1 345 aa11.01□□□□□ -0.65
TPM3-206ENST00000330188 DPF1Q92782 380 aa11.01□□□□□ -0.65
TPM3-206ENST00000330188 SMPXQ9UHP9 88 aa11.01□□□□□ -0.65
TPM3-206ENST00000330188 CELSR2Q9HCU4 2923 aa11.01□□□□□ -0.65
TPM3-206ENST00000330188 LEPP41159 167 aa11□□□□□ -0.65
TPM3-206ENST00000330188 ANKRD39Q53RE8 183 aa11□□□□□ -0.65
TPM3-206ENST00000330188 Q8N8P6 123 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms