RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 USMG5Q96IX5 58 aa13.08□□□□□ -0.31
SMAD3-201ENST00000327367 CHKB-CPT1BH3BT56 60 aa13.08□□□□□ -0.32
SMAD3-201ENST00000327367 TMEM105Q8N8V8 129 aa13.08□□□□□ -0.32
SMAD3-201ENST00000327367 SPTSSBQ8NFR3 76 aa13.08□□□□□ -0.32
SMAD3-201ENST00000327367 MPLKIPQ8TAP9 179 aa13.08□□□□□ -0.32
SMAD3-201ENST00000327367 CLEC2BQ92478 149 aa13.07□□□□□ -0.32
SMAD3-201ENST00000327367 FOXE3Q13461 319 aa13.07□□□□□ -0.32
SMAD3-201ENST00000327367 RPL39LQ96EH5 51 aaKnown RBP13.07□□□□□ -0.32
SMAD3-201ENST00000327367 PHF3Q92576 2039 aaKnown RBP13.07□□□□□ -0.32
SMAD3-201ENST00000327367 COL18A1P39060 1754 aa13.07□□□□□ -0.32
SMAD3-201ENST00000327367 RBAKDNA6NC62 111 aa13.07□□□□□ -0.32
SMAD3-201ENST00000327367 ATOX1O00244 68 aa13.07□□□□□ -0.32
SMAD3-201ENST00000327367 HERVK_113P63121 156 aa13.07□□□□□ -0.32
SMAD3-201ENST00000327367 RBBP6Q7Z6E9 1792 aaKnown RBP13.06□□□□□ -0.32
SMAD3-201ENST00000327367 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-201ENST00000327367 LTAP01374 205 aa13.06□□□□□ -0.32
SMAD3-201ENST00000327367 SBF2Q86WG5 1849 aa13.06□□□□□ -0.32
SMAD3-201ENST00000327367 C14orf132Q9NPU4 83 aa13.06□□□□□ -0.32
SMAD3-201ENST00000327367 ABCA7Q8IZY2 2146 aa13.06□□□□□ -0.32
SMAD3-201ENST00000327367 DIAPH2-AS1Q14236 149 aa13.06□□□□□ -0.32
SMAD3-201ENST00000327367 A4D1N5 150 aa13.06□□□□□ -0.32
SMAD3-201ENST00000327367 MDS2Q8NDY4 140 aa13.06□□□□□ -0.32
SMAD3-201ENST00000327367 COX7B2Q8TF08 81 aa13.06□□□□□ -0.32
SMAD3-201ENST00000327367 LY6DQ14210 128 aa13.06□□□□□ -0.32
SMAD3-201ENST00000327367 DYNAPQ8N1N2 210 aa13.06□□□□□ -0.32
SMAD3-201ENST00000327367 AHCTF1Q8WYP5 2266 aa13.05□□□□□ -0.32
SMAD3-201ENST00000327367 DOCK10Q96BY6 2186 aa13.05□□□□□ -0.32
SMAD3-201ENST00000327367 VOPP1Q96AW1 172 aa13.05□□□□□ -0.32
SMAD3-201ENST00000327367 MYLKQ15746 1914 aa13.05□□□□□ -0.32
SMAD3-201ENST00000327367 WISP1O95388 367 aa13.05□□□□□ -0.32
SMAD3-201ENST00000327367 PKIGQ9Y2B9 76 aa13.05□□□□□ -0.32
SMAD3-201ENST00000327367 WT1-ASQ06250 92 aa13.05□□□□□ -0.32
SMAD3-201ENST00000327367 CEP250Q9BV73 2442 aa13.04□□□□□ -0.32
SMAD3-201ENST00000327367 ANGP03950 147 aaKnown RBP13.04□□□□□ -0.32
SMAD3-201ENST00000327367 ACYP1P07311 99 aa13.04□□□□□ -0.32
SMAD3-201ENST00000327367 TEN1Q86WV5 123 aa13.04□□□□□ -0.32
SMAD3-201ENST00000327367 SPANXCQ9NY87 97 aa13.04□□□□□ -0.32
SMAD3-201ENST00000327367 LTBP4Q8N2S1 1624 aa13.04□□□□□ -0.32
SMAD3-201ENST00000327367 CRYGBP07316 175 aa13.04□□□□□ -0.32
SMAD3-201ENST00000327367 POU2AF1Q16633 256 aa13.03□□□□□ -0.32
SMAD3-201ENST00000327367 ZFP2Q6ZN57 461 aa13.03□□□□□ -0.32
SMAD3-201ENST00000327367 A0A0G2JMZ2 1700 aa13.03□□□□□ -0.32
SMAD3-201ENST00000327367 LRRC37A2A6NM11 1700 aa13.03□□□□□ -0.32
SMAD3-201ENST00000327367 LRRC37AA6NMS7 1700 aa13.03□□□□□ -0.32
SMAD3-201ENST00000327367 PARP14Q460N5 1801 aa13.03□□□□□ -0.32
SMAD3-201ENST00000327367 AKAP6Q13023 2319 aa13.03□□□□□ -0.32
SMAD3-201ENST00000327367 MED12Q93074 2177 aa13.03□□□□□ -0.32
SMAD3-201ENST00000327367 FAM186AA6NE01 2351 aa13.03□□□□□ -0.32
SMAD3-201ENST00000327367 CMC4P56277 68 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-201ENST00000327367 IGFBPL1Q8WX77 278 aa13.03□□□□□ -0.32
SMAD3-201ENST00000327367 Q6ZQT7 251 aa13.03□□□□□ -0.32
SMAD3-201ENST00000327367 SDK2Q58EX2 2172 aa13.03□□□□□ -0.32
SMAD3-201ENST00000327367 A0A0G2JNJ9 132 aa13.02□□□□□ -0.32
SMAD3-201ENST00000327367 PYGO2Q9BRQ0 406 aa13.02□□□□□ -0.32
SMAD3-201ENST00000327367 Q9UFV3 132 aa13.02□□□□□ -0.32
SMAD3-201ENST00000327367 LINC01620Q4KN68 170 aa13.02□□□□□ -0.32
SMAD3-201ENST00000327367 IGF2BP2-AS1Q96M15 143 aa13.02□□□□□ -0.32
SMAD3-201ENST00000327367 C17orf58Q2M2W7 97 aa13.02□□□□□ -0.33
SMAD3-201ENST00000327367 TRAV4A0A0B4J268 109 aa13.02□□□□□ -0.33
SMAD3-201ENST00000327367 MAPK1IP1LQ8NDC0 245 aa13.01□□□□□ -0.33
SMAD3-201ENST00000327367 C11orf52Q96A22 123 aa13.01□□□□□ -0.33
SMAD3-201ENST00000327367 COL4A5P29400 1685 aa13.01□□□□□ -0.33
SMAD3-201ENST00000327367 C5orf38Q86SI9 138 aa13.01□□□□□ -0.33
SMAD3-201ENST00000327367 FAM110DQ8TAY7 271 aaPredicted RBP13.01□□□□□ -0.33
SMAD3-201ENST00000327367 ZNF134P52741 427 aa13.01□□□□□ -0.33
SMAD3-201ENST00000327367 ZNF833PQ6ZTB9 187 aa13.01□□□□□ -0.33
SMAD3-201ENST00000327367 C1orf147Q96MC9 270 aaPredicted RBP13.01□□□□□ -0.33
SMAD3-201ENST00000327367 C20orf78Q9BR46 151 aa13.01□□□□□ -0.33
SMAD3-201ENST00000327367 B3GALT5-AS1P59052 145 aa13.01□□□□□ -0.33
SMAD3-201ENST00000327367 CGB3P0DN86 165 aa13□□□□□ -0.33
SMAD3-201ENST00000327367 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
SMAD3-201ENST00000327367 TMEM14CQ9P0S9 112 aa13□□□□□ -0.33
SMAD3-201ENST00000327367 MYO7BQ6PIF6 2116 aa13□□□□□ -0.33
SMAD3-201ENST00000327367 BPESC1Q9GZL8 116 aa13□□□□□ -0.33
SMAD3-201ENST00000327367 OOSP1A8MZH6 123 aa13□□□□□ -0.33
SMAD3-201ENST00000327367 MSRB1Q9NZV6 116 aa13□□□□□ -0.33
SMAD3-201ENST00000327367 KMT2EQ8IZD2 1858 aa13□□□□□ -0.33
SMAD3-201ENST00000327367 UBR3Q6ZT12 1888 aa12.99□□□□□ -0.33
SMAD3-201ENST00000327367 MT-ATP8P03928 68 aa12.99□□□□□ -0.33
SMAD3-201ENST00000327367 ARFGEF3Q5TH69 2177 aa12.99□□□□□ -0.33
SMAD3-201ENST00000327367 NCR3O14931 201 aa12.99□□□□□ -0.33
SMAD3-201ENST00000327367 FRMD6-AS1P0C7T7 363 aa12.99□□□□□ -0.33
SMAD3-201ENST00000327367 C8orf31Q8N9H6 132 aa12.99□□□□□ -0.33
SMAD3-201ENST00000327367 CSRP2Q16527 193 aa12.99□□□□□ -0.33
SMAD3-201ENST00000327367 TMEM61Q8N0U2 210 aa12.99□□□□□ -0.33
SMAD3-201ENST00000327367 A0A0J9YY99 117 aa12.99□□□□□ -0.33
SMAD3-201ENST00000327367 NHSL1Q5SYE7 1610 aa12.98□□□□□ -0.33
SMAD3-201ENST00000327367 LINC01545Q5VT33 79 aa12.98□□□□□ -0.33
SMAD3-201ENST00000327367 MBD3L4A6NDZ8 208 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-201ENST00000327367 MBD3L3A6NE82 208 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-201ENST00000327367 MBD3L5A6NJ08 208 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-201ENST00000327367 MBD3L2Q8NHZ7 208 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-201ENST00000327367 LYPD6BQ8NI32 183 aa12.98□□□□□ -0.33
SMAD3-201ENST00000327367 UBE2BP63146 152 aa12.98□□□□□ -0.33
SMAD3-201ENST00000327367 LYPD6Q86Y78 171 aa12.98□□□□□ -0.33
SMAD3-201ENST00000327367 E9PQ18 207 aa12.97□□□□□ -0.33
SMAD3-201ENST00000327367 U3KQE9 123 aa12.97□□□□□ -0.33
SMAD3-201ENST00000327367 Q6ZR03 302 aa12.97□□□□□ -0.33
SMAD3-201ENST00000327367 HEATR5AQ86XA9 2040 aa12.97□□□□□ -0.33
SMAD3-201ENST00000327367 SLC25A29Q8N8R3 303 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms