RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 Q8N9W7 124 aa9.99□□□□□ -0.81
HMGCS1-201ENST00000325110 POLQO75417 2590 aa9.99□□□□□ -0.81
HMGCS1-201ENST00000325110 ZC2HC1BQ5TFG8 222 aa9.99□□□□□ -0.81
HMGCS1-201ENST00000325110 MYOZ3Q8TDC0 251 aa9.99□□□□□ -0.81
HMGCS1-201ENST00000325110 AGPAT4-IT1Q9H0P7 198 aa9.99□□□□□ -0.81
HMGCS1-201ENST00000325110 TLN2Q9Y4G6 2542 aa9.99□□□□□ -0.81
HMGCS1-201ENST00000325110 C2orf91Q6ZV80 131 aa9.99□□□□□ -0.81
HMGCS1-201ENST00000325110 DTX2Q86UW9 622 aa9.99□□□□□ -0.81
HMGCS1-201ENST00000325110 EEF1AKMT3Q96AZ1 226 aa9.99□□□□□ -0.81
HMGCS1-201ENST00000325110 MYO18BQ8IUG5 2567 aa9.99□□□□□ -0.81
HMGCS1-201ENST00000325110 PAX2Q02962 417 aa9.98□□□□□ -0.81
HMGCS1-201ENST00000325110 LGALS9BQ3B8N2 356 aa9.98□□□□□ -0.81
HMGCS1-201ENST00000325110 LGALS9CQ6DKI2 356 aa9.98□□□□□ -0.81
HMGCS1-201ENST00000325110 ATP5G2Q06055 141 aa9.98□□□□□ -0.81
HMGCS1-201ENST00000325110 LCNL1Q6ZST4 164 aa9.98□□□□□ -0.81
HMGCS1-201ENST00000325110 MSRB2Q9Y3D2 182 aa9.98□□□□□ -0.81
HMGCS1-201ENST00000325110 MYO9AB2RTY4 2548 aa9.98□□□□□ -0.81
HMGCS1-201ENST00000325110 K7ERU9 68 aa9.98□□□□□ -0.81
HMGCS1-201ENST00000325110 SEC11AP67812 179 aa9.98□□□□□ -0.81
HMGCS1-201ENST00000325110 COL25A1Q9BXS0 654 aaPredicted RBP9.98□□□□□ -0.81
HMGCS1-201ENST00000325110 NHP2Q9NX24 153 aaKnown RBP9.98□□□□□ -0.81
HMGCS1-201ENST00000325110 USP9XQ93008 2570 aaPredicted RBP9.97□□□□□ -0.81
HMGCS1-201ENST00000325110 A0A0G2JLM5 398 aa9.97□□□□□ -0.81
HMGCS1-201ENST00000325110 TRBV6-1A0A0K0K1D8 114 aa9.97□□□□□ -0.81
HMGCS1-201ENST00000325110 ODF3BA8MYP8 253 aa9.97□□□□□ -0.81
HMGCS1-201ENST00000325110 PF4V1P10720 104 aa9.97□□□□□ -0.81
HMGCS1-201ENST00000325110 EFNA4P52798 201 aa9.97□□□□□ -0.81
HMGCS1-201ENST00000325110 RIPPLY3P57055 190 aa9.97□□□□□ -0.81
HMGCS1-201ENST00000325110 OCIAD2Q56VL3 154 aa9.97□□□□□ -0.81
HMGCS1-201ENST00000325110 ZNF493Q6ZR52 646 aa9.97□□□□□ -0.81
HMGCS1-201ENST00000325110 BUB3O43684 328 aa9.97□□□□□ -0.81
HMGCS1-201ENST00000325110 SPCS1Q9Y6A9 102 aa9.97□□□□□ -0.81
HMGCS1-201ENST00000325110 TRAV40A0A0B4J280 105 aa9.96□□□□□ -0.81
HMGCS1-201ENST00000325110 K7ERJ3 54 aa9.96□□□□□ -0.81
HMGCS1-201ENST00000325110 RBX1P62877 108 aa9.96□□□□□ -0.81
HMGCS1-201ENST00000325110 HSD52Q0P140 79 aa9.96□□□□□ -0.81
HMGCS1-201ENST00000325110 MINOS1Q5TGZ0 78 aa9.96□□□□□ -0.81
HMGCS1-201ENST00000325110 C8orf86Q6ZUL3 223 aa9.96□□□□□ -0.81
HMGCS1-201ENST00000325110 MINOS1-NBL1R4GNA1 71 aa9.96□□□□□ -0.81
HMGCS1-201ENST00000325110 SETD2Q9BYW2 2564 aaPredicted RBP9.96□□□□□ -0.81
HMGCS1-201ENST00000325110 SAP30O75446 220 aa9.96□□□□□ -0.81
HMGCS1-201ENST00000325110 SMIM17P0DL12 118 aa9.96□□□□□ -0.81
HMGCS1-201ENST00000325110 C16orf54Q6UWD8 224 aa9.96□□□□□ -0.81
HMGCS1-201ENST00000325110 OR2K2Q8NGT1 345 aa9.96□□□□□ -0.81
HMGCS1-201ENST00000325110 MEGF9Q9H1U4 602 aa9.96□□□□□ -0.81
HMGCS1-201ENST00000325110 NXT2Q9NPJ8 142 aaKnown RBP9.96□□□□□ -0.81
HMGCS1-201ENST00000325110 IGKCP01834 107 aa9.96□□□□□ -0.82
HMGCS1-201ENST00000325110 ARL3P36405 182 aa9.96□□□□□ -0.82
HMGCS1-201ENST00000325110 COTL1Q14019 142 aa9.96□□□□□ -0.82
HMGCS1-201ENST00000325110 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.96□□□□□ -0.82
HMGCS1-201ENST00000325110 FAM110DQ8TAY7 271 aaPredicted RBP9.96□□□□□ -0.82
HMGCS1-201ENST00000325110 SLC50A1Q9BRV3 221 aa9.96□□□□□ -0.82
HMGCS1-201ENST00000325110 PPBPP02775 128 aa9.95□□□□□ -0.82
HMGCS1-201ENST00000325110 NBL1P41271 181 aa9.95□□□□□ -0.82
HMGCS1-201ENST00000325110 ZNF502Q8TBZ5 544 aa9.95□□□□□ -0.82
HMGCS1-201ENST00000325110 ZFYVE26Q68DK2 2539 aa9.95□□□□□ -0.82
HMGCS1-201ENST00000325110 A0A1W2PPR1 153 aa9.95□□□□□ -0.82
HMGCS1-201ENST00000325110 TMEM8BA6NDV4 472 aa9.95□□□□□ -0.82
HMGCS1-201ENST00000325110 IGKV3-20P01619 116 aa9.95□□□□□ -0.82
HMGCS1-201ENST00000325110 PHLDA3Q9Y5J5 127 aa9.95□□□□□ -0.82
HMGCS1-201ENST00000325110 PTPN13Q12923 2485 aa9.95□□□□□ -0.82
HMGCS1-201ENST00000325110 HRNRQ86YZ3 2850 aaPredicted RBP9.95□□□□□ -0.82
HMGCS1-201ENST00000325110 FABP2P12104 132 aa9.95□□□□□ -0.82
HMGCS1-201ENST00000325110 F5H697 171 aa9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 F6UB75 175 aa9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 RAB9AP51151 201 aa9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 PAX8Q06710 450 aa9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 MRPL35Q9NZE8 188 aaKnown RBP9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 IGKV2D-26A0A0A0MRZ7 120 aa9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 IGKV3D-20A0A0C4DH25 116 aa9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 IGF1P05019 195 aa9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 IGLC6P0CF74 106 aa9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 C14orf178Q8N769 122 aaPredicted RBP9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 OR9G4Q8NGQ1 327 aa9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 C11orf21Q9P2W6 132 aa9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 NPFFO15130 113 aa9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 DPM2O94777 84 aa9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 RNASE4P34096 147 aaKnown RBP9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 SFTA2Q6UW10 78 aa9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 CCDC140Q96MF4 163 aa9.94□□□□□ -0.82
HMGCS1-201ENST00000325110 C2CD3Q4AC94 2353 aa9.93□□□□□ -0.82
HMGCS1-201ENST00000325110 OOSP1A8MZH6 123 aa9.93□□□□□ -0.82
HMGCS1-201ENST00000325110 IGHG4P01861 327 aa9.93□□□□□ -0.82
HMGCS1-201ENST00000325110 OR4X2Q8NGF9 303 aa9.93□□□□□ -0.82
HMGCS1-201ENST00000325110 OR1N2Q8NGR9 330 aa9.93□□□□□ -0.82
HMGCS1-201ENST00000325110 OR10J6PQ8NGY7 276 aa9.93□□□□□ -0.82
HMGCS1-201ENST00000325110 TRAV41A0A0B4J266 112 aa9.93□□□□□ -0.82
HMGCS1-201ENST00000325110 SMIM13P0DJ93 91 aa9.93□□□□□ -0.82
HMGCS1-201ENST00000325110 UBE2E1P51965 193 aa9.93□□□□□ -0.82
HMGCS1-201ENST00000325110 BOD1L2Q8IYS8 172 aa9.93□□□□□ -0.82
HMGCS1-201ENST00000325110 RNF185Q96GF1 192 aa9.93□□□□□ -0.82
HMGCS1-201ENST00000325110 HIST1H4GQ99525 98 aa9.93□□□□□ -0.82
HMGCS1-201ENST00000325110 PIEZO1Q92508 2521 aa9.93□□□□□ -0.82
HMGCS1-201ENST00000325110 MTURNQ8N3F0 131 aa9.93□□□□□ -0.82
HMGCS1-201ENST00000325110 PIP4P2Q8N4L2 257 aa9.93□□□□□ -0.82
HMGCS1-201ENST00000325110 OVOL3O00110 214 aa9.92□□□□□ -0.82
HMGCS1-201ENST00000325110 NEGR1Q7Z3B1 354 aa9.92□□□□□ -0.82
HMGCS1-201ENST00000325110 JMJD8Q96S16 334 aa9.92□□□□□ -0.82
HMGCS1-201ENST00000325110 CHAC1Q9BUX1 264 aa9.92□□□□□ -0.82
HMGCS1-201ENST00000325110 C9orf118A6NHY6 69 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms