RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 ZNF580Q9UK33 172 aa16.33■□□□□ 0.2
LIMS2-201ENST00000324938 CELSR2Q9HCU4 2923 aa16.33■□□□□ 0.2
LIMS2-201ENST00000324938 A0A0G2JLM5 398 aa16.32■□□□□ 0.2
LIMS2-201ENST00000324938 SOCS3O14543 225 aa16.32■□□□□ 0.2
LIMS2-201ENST00000324938 NPYP01303 97 aa16.32■□□□□ 0.2
LIMS2-201ENST00000324938 TSPOP30536 169 aa16.32■□□□□ 0.2
LIMS2-201ENST00000324938 LINC01545Q5VT33 79 aa16.32■□□□□ 0.2
LIMS2-201ENST00000324938 NPFFR1Q9GZQ6 430 aa16.32■□□□□ 0.2
LIMS2-201ENST00000324938 ST20Q9HBF5 79 aa16.32■□□□□ 0.2
LIMS2-201ENST00000324938 LENEPQ9Y5L5 61 aa16.32■□□□□ 0.2
LIMS2-201ENST00000324938 TCAPO15273 167 aa16.31■□□□□ 0.2
LIMS2-201ENST00000324938 LOXL1Q08397 574 aaPredicted RBP16.31■□□□□ 0.2
LIMS2-201ENST00000324938 ZNF738Q8NE65 137 aa16.31■□□□□ 0.2
LIMS2-201ENST00000324938 TIMM8BQ9Y5J9 83 aaPredicted RBP16.31■□□□□ 0.2
LIMS2-201ENST00000324938 MYO18BQ8IUG5 2567 aa16.31■□□□□ 0.2
LIMS2-201ENST00000324938 SMKR1H3BMG3 65 aa16.31■□□□□ 0.2
LIMS2-201ENST00000324938 LINC01356Q8N9X3 169 aa16.31■□□□□ 0.2
LIMS2-201ENST00000324938 MRPS16Q9Y3D3 137 aaKnown RBP16.31■□□□□ 0.2
LIMS2-201ENST00000324938 A0A096LNT2 108 aa16.3■□□□□ 0.2
LIMS2-201ENST00000324938 PPBPP02775 128 aa16.3■□□□□ 0.2
LIMS2-201ENST00000324938 BATFQ16520 125 aa16.3■□□□□ 0.2
LIMS2-201ENST00000324938 LAMTOR2Q9Y2Q5 125 aa16.3■□□□□ 0.2
LIMS2-201ENST00000324938 NCR2O95944 276 aa16.3■□□□□ 0.2
LIMS2-201ENST00000324938 FOXE3Q13461 319 aa16.29■□□□□ 0.2
LIMS2-201ENST00000324938 LCNL1Q6ZST4 164 aa16.29■□□□□ 0.2
LIMS2-201ENST00000324938 UTP20O75691 2785 aaKnown RBP16.28■□□□□ 0.2
LIMS2-201ENST00000324938 IGHV7-4-1A0A0J9YVY3 117 aa16.28■□□□□ 0.2
LIMS2-201ENST00000324938 hDV102S1A0JD36 115 aa16.28■□□□□ 0.2
LIMS2-201ENST00000324938 PRSS57Q6UWY2 283 aa16.28■□□□□ 0.2
LIMS2-201ENST00000324938 USP24Q9UPU5 2620 aa16.28■□□□□ 0.2
LIMS2-201ENST00000324938 H0Y8G0 127 aa16.28■□□□□ 0.2
LIMS2-201ENST00000324938 OVOL1O14753 267 aa16.28■□□□□ 0.2
LIMS2-201ENST00000324938 TCF21O43680 179 aa16.28■□□□□ 0.2
LIMS2-201ENST00000324938 PRB1P04280 392 aa16.28■□□□□ 0.2
LIMS2-201ENST00000324938 LINC00477Q96M19 166 aa16.28■□□□□ 0.2
LIMS2-201ENST00000324938 CRYBG3Q68DQ2 2970 aa16.28■□□□□ 0.2
LIMS2-201ENST00000324938 COL5A1-AS1Q5SY13 56 aa16.27■□□□□ 0.2
LIMS2-201ENST00000324938 PRR9Q5T870 116 aa16.27■□□□□ 0.2
LIMS2-201ENST00000324938 MCRIP2Q9BUT9 160 aaKnown RBP16.27■□□□□ 0.2
LIMS2-201ENST00000324938 HSBP1L1C9JCN9 74 aa16.27■□□□□ 0.19
LIMS2-201ENST00000324938 DEFB112Q30KQ8 113 aa16.27■□□□□ 0.19
LIMS2-201ENST00000324938 ANKRD17O75179 2603 aaKnown RBP16.26■□□□□ 0.19
LIMS2-201ENST00000324938 J3QLI3 93 aa16.26■□□□□ 0.19
LIMS2-201ENST00000324938 HBDP02042 147 aa16.26■□□□□ 0.19
LIMS2-201ENST00000324938 COX6B1P14854 86 aa16.26■□□□□ 0.19
LIMS2-201ENST00000324938 OR10J6PQ8NGY7 276 aa16.26■□□□□ 0.19
LIMS2-201ENST00000324938 MAP1LC3AQ9H492 121 aa16.26■□□□□ 0.19
LIMS2-201ENST00000324938 MAP1AP78559 2803 aaPredicted RBP16.26■□□□□ 0.19
LIMS2-201ENST00000324938 IGHV4-59P01825 116 aa16.25■□□□□ 0.19
LIMS2-201ENST00000324938 DAZ1Q9NQZ3 744 aaKnown RBP16.25■□□□□ 0.19
LIMS2-201ENST00000324938 CSPG4Q6UVK1 2322 aa16.25■□□□□ 0.19
LIMS2-201ENST00000324938 SNAI2O43623 268 aa16.25■□□□□ 0.19
LIMS2-201ENST00000324938 Q6ZQT7 251 aa16.25■□□□□ 0.19
LIMS2-201ENST00000324938 RHPN1-AS1Q9BWJ2 59 aa16.25■□□□□ 0.19
LIMS2-201ENST00000324938 LINC01546A6NGU7 62 aa16.24■□□□□ 0.19
LIMS2-201ENST00000324938 TMEM95Q3KNT9 176 aa16.24■□□□□ 0.19
LIMS2-201ENST00000324938 ZFAND2AQ8N6M9 145 aa16.24■□□□□ 0.19
LIMS2-201ENST00000324938 MS4A6AQ9H2W1 248 aa16.24■□□□□ 0.19
LIMS2-201ENST00000324938 IGHV4-4A0A075B6R2 117 aa16.24■□□□□ 0.19
LIMS2-201ENST00000324938 TM4SF20Q53R12 229 aa16.24■□□□□ 0.19
LIMS2-201ENST00000324938 BBC3Q96PG8 261 aaPredicted RBP16.24■□□□□ 0.19
LIMS2-201ENST00000324938 PMCHL2Q9BQD1 86 aa16.24■□□□□ 0.19
LIMS2-201ENST00000324938 PEF1Q9UBV8 284 aaKnown RBP16.24■□□□□ 0.19
LIMS2-201ENST00000324938 GAS8-AS1O95177 125 aa16.23■□□□□ 0.19
LIMS2-201ENST00000324938 TNFRSF6BO95407 300 aa16.23■□□□□ 0.19
LIMS2-201ENST00000324938 PSMB8P28062 276 aa16.23■□□□□ 0.19
LIMS2-201ENST00000324938 OR8A1Q8NGG7 326 aa16.23■□□□□ 0.19
LIMS2-201ENST00000324938 CACNG7P62955 275 aa16.22■□□□□ 0.19
LIMS2-201ENST00000324938 STPG4Q8N801 248 aa16.22■□□□□ 0.19
LIMS2-201ENST00000324938 SCRT2Q9NQ03 307 aa16.22■□□□□ 0.19
LIMS2-201ENST00000324938 K7EMT4 169 aa16.22■□□□□ 0.19
LIMS2-201ENST00000324938 RPL11P62913 178 aaKnown RBP16.22■□□□□ 0.19
LIMS2-201ENST00000324938 FAM19A4Q96LR4 140 aa16.22■□□□□ 0.19
LIMS2-201ENST00000324938 SMPXQ9UHP9 88 aa16.22■□□□□ 0.19
LIMS2-201ENST00000324938 EVI2AP22794 236 aa16.21■□□□□ 0.19
LIMS2-201ENST00000324938 SMIM15Q7Z3B0 74 aa16.21■□□□□ 0.19
LIMS2-201ENST00000324938 NXT2Q9NPJ8 142 aaKnown RBP16.21■□□□□ 0.19
LIMS2-201ENST00000324938 FXYD7P58549 80 aa16.21■□□□□ 0.18
LIMS2-201ENST00000324938 LGALS9BQ3B8N2 356 aa16.21■□□□□ 0.18
LIMS2-201ENST00000324938 LGALS9CQ6DKI2 356 aa16.21■□□□□ 0.18
LIMS2-201ENST00000324938 TRAV21A0A0B4J279 112 aa16.2■□□□□ 0.18
LIMS2-201ENST00000324938 TMEM89A2RUT3 159 aa16.2■□□□□ 0.18
LIMS2-201ENST00000324938 TGFAP01135 160 aa16.2■□□□□ 0.18
LIMS2-201ENST00000324938 ZNF25P17030 456 aaPredicted RBP16.2■□□□□ 0.18
LIMS2-201ENST00000324938 SRSF1Q07955 248 aaKnown RBP eCLIP16.2■□□□□ 0.18
LIMS2-201ENST00000324938 SLC25A34Q6PIV7 304 aa16.2■□□□□ 0.18
LIMS2-201ENST00000324938 CR1P17927 2039 aa16.2■□□□□ 0.18
LIMS2-201ENST00000324938 H3BVH4 76 aa16.19■□□□□ 0.18
LIMS2-201ENST00000324938 TFPI2P48307 235 aa16.19■□□□□ 0.18
LIMS2-201ENST00000324938 DEFB1P60022 68 aa16.19■□□□□ 0.18
LIMS2-201ENST00000324938 APRG1Q8IVJ8 170 aa16.19■□□□□ 0.18
LIMS2-201ENST00000324938 ZNF462Q96JM2 2506 aa16.19■□□□□ 0.18
LIMS2-201ENST00000324938 TRBV7-9A0A0J9YWB2 115 aa16.19■□□□□ 0.18
LIMS2-201ENST00000324938 G0S2P27469 103 aa16.19■□□□□ 0.18
LIMS2-201ENST00000324938 HINT1P49773 126 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-201ENST00000324938 SPANXN1Q5VSR9 72 aa16.19■□□□□ 0.18
LIMS2-201ENST00000324938 TP73-AS1Q9UF72 201 aa16.19■□□□□ 0.18
LIMS2-201ENST00000324938 GATA1P15976 413 aaPredicted RBP16.18■□□□□ 0.18
LIMS2-201ENST00000324938 IFI27L1Q96BM0 104 aa16.18■□□□□ 0.18
LIMS2-201ENST00000324938 GOLT1BQ9Y3E0 138 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms