RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 RNASE4P34096 147 aaKnown RBP11.23□□□□□ -0.61
PRPF3-201ENST00000324862 RPL19P84098 196 aaKnown RBP11.23□□□□□ -0.61
PRPF3-201ENST00000324862 EGFEM1PQ0D2K5 195 aa11.23□□□□□ -0.61
PRPF3-201ENST00000324862 TRPT1Q86TN4 253 aaKnown RBP11.23□□□□□ -0.61
PRPF3-201ENST00000324862 SVBPQ8N300 66 aa11.23□□□□□ -0.61
PRPF3-201ENST00000324862 SAPCD1Q5SSQ6 148 aa11.23□□□□□ -0.61
PRPF3-201ENST00000324862 NDFIP1Q9BT67 221 aa11.23□□□□□ -0.61
PRPF3-201ENST00000324862 C7orf77A4D0Y5 90 aa11.22□□□□□ -0.61
PRPF3-201ENST00000324862 DUSP14O95147 198 aaKnown RBP11.22□□□□□ -0.61
PRPF3-201ENST00000324862 GPX1P07203 203 aa11.22□□□□□ -0.61
PRPF3-201ENST00000324862 S100A1P23297 94 aa11.22□□□□□ -0.61
PRPF3-201ENST00000324862 RNF212Q495C1 297 aa11.22□□□□□ -0.61
PRPF3-201ENST00000324862 SRD5A3Q9H8P0 318 aa11.22□□□□□ -0.61
PRPF3-201ENST00000324862 C11orf21Q9P2W6 132 aa11.22□□□□□ -0.61
PRPF3-201ENST00000324862 CRXO43186 299 aaPredicted RBP11.21□□□□□ -0.61
PRPF3-201ENST00000324862 PRM2P04554 102 aa11.21□□□□□ -0.61
PRPF3-201ENST00000324862 RBMY1A1P0DJD3 496 aaKnown RBP11.21□□□□□ -0.61
PRPF3-201ENST00000324862 RBMY1CP0DJD4 496 aa11.21□□□□□ -0.61
PRPF3-201ENST00000324862 ERVFC1-1P60608 527 aa11.21□□□□□ -0.61
PRPF3-201ENST00000324862 RBMY1FQ15415 496 aaKnown RBP11.21□□□□□ -0.61
PRPF3-201ENST00000324862 SMUG1Q53HV7 270 aa11.21□□□□□ -0.61
PRPF3-201ENST00000324862 GFI1BQ5VTD9 330 aa11.21□□□□□ -0.61
PRPF3-201ENST00000324862 FAM110AQ9BQ89 295 aa11.21□□□□□ -0.61
PRPF3-201ENST00000324862 TRAV12-3A0A0B4J271 114 aa11.21□□□□□ -0.61
PRPF3-201ENST00000324862 NUDT10Q8NFP7 164 aa11.21□□□□□ -0.61
PRPF3-201ENST00000324862 NUDT11Q96G61 164 aa11.21□□□□□ -0.61
PRPF3-201ENST00000324862 SFRP2Q96HF1 295 aa11.21□□□□□ -0.61
PRPF3-201ENST00000324862 RPS10P5Q9NQ39 176 aa11.21□□□□□ -0.61
PRPF3-201ENST00000324862 XCL2Q9UBD3 114 aa11.21□□□□□ -0.61
PRPF3-201ENST00000324862 LY96Q9Y6Y9 160 aa11.21□□□□□ -0.61
PRPF3-201ENST00000324862 TMSB15BA0A087X1C1 80 aa11.2□□□□□ -0.62
PRPF3-201ENST00000324862 KLLNB2CW77 178 aa11.2□□□□□ -0.62
PRPF3-201ENST00000324862 SH2D1AO60880 128 aa11.2□□□□□ -0.62
PRPF3-201ENST00000324862 CRISP2P16562 243 aa11.2□□□□□ -0.62
PRPF3-201ENST00000324862 CDKN1BP46527 198 aa11.2□□□□□ -0.62
PRPF3-201ENST00000324862 PNRC1Q12796 327 aaPredicted RBP11.2□□□□□ -0.62
PRPF3-201ENST00000324862 KRTAP21-3Q3LHN1 58 aa11.2□□□□□ -0.62
PRPF3-201ENST00000324862 A8MTW9 85 aa11.2□□□□□ -0.62
PRPF3-201ENST00000324862 GIG44P09565 113 aaPredicted RBP11.2□□□□□ -0.62
PRPF3-201ENST00000324862 IBA57Q5T440 356 aaKnown RBP11.2□□□□□ -0.62
PRPF3-201ENST00000324862 C19orf71A6NCJ1 209 aa11.19□□□□□ -0.62
PRPF3-201ENST00000324862 FBLL1A6NHQ2 334 aaKnown RBP11.19□□□□□ -0.62
PRPF3-201ENST00000324862 SNAPINO95295 136 aa11.19□□□□□ -0.62
PRPF3-201ENST00000324862 MUC21Q5SSG8 566 aa11.19□□□□□ -0.62
PRPF3-201ENST00000324862 GZMBP10144 247 aa11.19□□□□□ -0.62
PRPF3-201ENST00000324862 CMC4P56277 68 aaPredicted RBP11.19□□□□□ -0.62
PRPF3-201ENST00000324862 TMEM88Q6PEY1 159 aa11.19□□□□□ -0.62
PRPF3-201ENST00000324862 COX8CQ7Z4L0 72 aa11.19□□□□□ -0.62
PRPF3-201ENST00000324862 NAGKQ9UJ70 344 aa11.19□□□□□ -0.62
PRPF3-201ENST00000324862 PFN1P07737 140 aaKnown RBP11.18□□□□□ -0.62
PRPF3-201ENST00000324862 IGHV4-30-4P0DP06 118 aa11.18□□□□□ -0.62
PRPF3-201ENST00000324862 FAM162BQ5T6X4 162 aa11.18□□□□□ -0.62
PRPF3-201ENST00000324862 ZNF575Q86XF7 245 aa11.18□□□□□ -0.62
PRPF3-201ENST00000324862 SMIM12Q96EX1 92 aa11.18□□□□□ -0.62
PRPF3-201ENST00000324862 LENEPQ9Y5L5 61 aa11.18□□□□□ -0.62
PRPF3-201ENST00000324862 V9GYV3 84 aa11.18□□□□□ -0.62
PRPF3-201ENST00000324862 OR10G8Q8NGN5 311 aa11.17□□□□□ -0.62
PRPF3-201ENST00000324862 IGKV3D-20A0A0C4DH25 116 aa11.17□□□□□ -0.62
PRPF3-201ENST00000324862 ZNF705GA8MUZ8 300 aaPredicted RBP11.17□□□□□ -0.62
PRPF3-201ENST00000324862 ZNF324O75467 553 aaPredicted RBP11.17□□□□□ -0.62
PRPF3-201ENST00000324862 LEPP41159 167 aa11.17□□□□□ -0.62
PRPF3-201ENST00000324862 CBLN2Q8IUK8 224 aa11.17□□□□□ -0.62
PRPF3-201ENST00000324862 ODF3Q96PU9 254 aa11.17□□□□□ -0.62
PRPF3-201ENST00000324862 C7orf71A4D174 169 aa11.16□□□□□ -0.62
PRPF3-201ENST00000324862 FABP5P3A8MUU1 101 aa11.16□□□□□ -0.62
PRPF3-201ENST00000324862 P01737 135 aa11.16□□□□□ -0.62
PRPF3-201ENST00000324862 ORM1P02763 201 aa11.16□□□□□ -0.62
PRPF3-201ENST00000324862 HTN1P15515 57 aa11.16□□□□□ -0.62
PRPF3-201ENST00000324862 DAZAP1Q96EP5 407 aaKnown RBP11.16□□□□□ -0.62
PRPF3-201ENST00000324862 IGHV3OR16-12A0A075B7B8 117 aa11.16□□□□□ -0.62
PRPF3-201ENST00000324862 GRIFINA4D1Z8 144 aa11.16□□□□□ -0.62
PRPF3-201ENST00000324862 SPRY2O43597 315 aa11.16□□□□□ -0.62
PRPF3-201ENST00000324862 TCL1AP56279 114 aa11.16□□□□□ -0.62
PRPF3-201ENST00000324862 TUBA4BQ9H853 241 aa11.16□□□□□ -0.62
PRPF3-201ENST00000324862 TP53TG3Q9ULZ0 132 aa11.16□□□□□ -0.62
PRPF3-201ENST00000324862 URGCP-MRPS24S4R325 110 aa11.16□□□□□ -0.62
PRPF3-201ENST00000324862 Q6AWC8 147 aa11.15□□□□□ -0.62
PRPF3-201ENST00000324862 OR2D3Q8NGH3 330 aa11.15□□□□□ -0.62
PRPF3-201ENST00000324862 TRBV7-9A0A0J9YWB2 115 aa11.15□□□□□ -0.63
PRPF3-201ENST00000324862 TSPOP30536 169 aa11.15□□□□□ -0.63
PRPF3-201ENST00000324862 RHEBQ15382 184 aa11.15□□□□□ -0.63
PRPF3-201ENST00000324862 ANXA2RQ3ZCQ2 193 aa11.15□□□□□ -0.63
PRPF3-201ENST00000324862 FAM231DQ6ZW35 169 aa11.15□□□□□ -0.63
PRPF3-201ENST00000324862 OSTCQ9NRP0 149 aa11.15□□□□□ -0.63
PRPF3-201ENST00000324862 GATCO43716 136 aaKnown RBP11.14□□□□□ -0.63
PRPF3-201ENST00000324862 MT-ND4LP03901 98 aa11.14□□□□□ -0.63
PRPF3-201ENST00000324862 RPP21Q9H633 154 aaKnown RBP11.14□□□□□ -0.63
PRPF3-201ENST00000324862 TRAV21A0A0B4J279 112 aa11.14□□□□□ -0.63
PRPF3-201ENST00000324862 MUC21A0A0G2JKD1 596 aa11.14□□□□□ -0.63
PRPF3-201ENST00000324862 MUC21A0A140T8X8 626 aa11.14□□□□□ -0.63
PRPF3-201ENST00000324862 H7BYZ3 331 aa11.14□□□□□ -0.63
PRPF3-201ENST00000324862 GNRH2O43555 120 aa11.14□□□□□ -0.63
PRPF3-201ENST00000324862 FAM3BP58499 235 aaPredicted RBP11.14□□□□□ -0.63
PRPF3-201ENST00000324862 SSTP61278 116 aa11.14□□□□□ -0.63
PRPF3-201ENST00000324862 C1orf158Q8N1D5 194 aa11.14□□□□□ -0.63
PRPF3-201ENST00000324862 C15orf54Q8N8G6 183 aa11.14□□□□□ -0.63
PRPF3-201ENST00000324862 B4DEV8 164 aa11.13□□□□□ -0.63
PRPF3-201ENST00000324862 GTSF1Q8WW33 167 aa11.13□□□□□ -0.63
PRPF3-201ENST00000324862 CLUHP3Q96NS8 147 aa11.13□□□□□ -0.63
PRPF3-201ENST00000324862 LOC102724200A0A096LPH7 203 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms