RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 SPATA12Q7Z6I5 190 aa9.8□□□□□ -0.84
DDX39A-202ENST00000324340 TMEM190Q8WZ59 177 aa9.8□□□□□ -0.84
DDX39A-202ENST00000324340 RNF24Q9Y225 148 aa9.8□□□□□ -0.84
DDX39A-202ENST00000324340 HIGD1AQ9Y241 93 aa9.8□□□□□ -0.84
DDX39A-202ENST00000324340 C9orf118A6NHY6 69 aa9.79□□□□□ -0.84
DDX39A-202ENST00000324340 SIVA1O15304 175 aa9.79□□□□□ -0.84
DDX39A-202ENST00000324340 TRBV12-3P01733 135 aa9.79□□□□□ -0.84
DDX39A-202ENST00000324340 IGHV3-11P01762 117 aa9.79□□□□□ -0.84
DDX39A-202ENST00000324340 TAS2R45P59539 299 aa9.79□□□□□ -0.84
DDX39A-202ENST00000324340 TCTEX1D4Q5JR98 221 aa9.79□□□□□ -0.84
DDX39A-202ENST00000324340 LCN12Q6JVE5 192 aa9.79□□□□□ -0.84
DDX39A-202ENST00000324340 Q6ZVH6 145 aa9.79□□□□□ -0.84
DDX39A-202ENST00000324340 FAM19A2Q8N3H0 131 aa9.79□□□□□ -0.84
DDX39A-202ENST00000324340 WFDC12Q8WWY7 111 aa9.79□□□□□ -0.84
DDX39A-202ENST00000324340 FAM167A-AS1Q96KT0 104 aa9.79□□□□□ -0.84
DDX39A-202ENST00000324340 IGF2BP2-AS1Q96M15 143 aa9.79□□□□□ -0.84
DDX39A-202ENST00000324340 SLC25A2Q9BXI2 301 aa9.79□□□□□ -0.84
DDX39A-202ENST00000324340 A0A1B0GV72 72 aa9.78□□□□□ -0.84
DDX39A-202ENST00000324340 H3BRN7 92 aa9.78□□□□□ -0.84
DDX39A-202ENST00000324340 K7EP34 96 aa9.78□□□□□ -0.84
DDX39A-202ENST00000324340 LGALS1P09382 135 aaKnown RBP9.78□□□□□ -0.84
DDX39A-202ENST00000324340 ZNF503Q96F45 646 aa9.78□□□□□ -0.84
DDX39A-202ENST00000324340 AP1S3Q96PC3 154 aa9.78□□□□□ -0.84
DDX39A-202ENST00000324340 SHANK2-AS3Q9BTD1 123 aa9.78□□□□□ -0.84
DDX39A-202ENST00000324340 SSBP4Q9BWG4 385 aaPredicted RBP9.78□□□□□ -0.84
DDX39A-202ENST00000324340 SLC25A39Q9BZJ4 359 aaPredicted RBP9.78□□□□□ -0.84
DDX39A-202ENST00000324340 HSPB8Q9UJY1 196 aa9.78□□□□□ -0.84
DDX39A-202ENST00000324340 C2CD3Q4AC94 2353 aa9.78□□□□□ -0.84
DDX39A-202ENST00000324340 TRAV5A0A0B4J249 113 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 MUC21A0A0G2JKD1 596 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 MUC21A0A140T8X8 626 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 TMEM189A5PLL7 270 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 NDUFA4O00483 81 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 IGLV2-8P01709 118 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 COX8AP10176 69 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 MAJINQ3KP22 176 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 KIAA1644Q3SXP7 199 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 CT83Q5H943 113 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 MUC21Q5SSG8 566 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 SAMD13Q5VXD3 122 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 S100A7AQ86SG5 101 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 MTURNQ8N3F0 131 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 STXBP6Q8NFX7 210 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 OR1N2Q8NGR9 330 aa9.77□□□□□ -0.84
DDX39A-202ENST00000324340 FN1P02751 2386 aaKnown RBP9.77□□□□□ -0.85
DDX39A-202ENST00000324340 TRAV8-6A0A0B4J262 113 aa9.76□□□□□ -0.85
DDX39A-202ENST00000324340 A0A1B0GXF2 115 aa9.76□□□□□ -0.85
DDX39A-202ENST00000324340 CLPSL1A2RUU4 121 aa9.76□□□□□ -0.85
DDX39A-202ENST00000324340 C7orf71A4D174 169 aa9.76□□□□□ -0.85
DDX39A-202ENST00000324340 S100A7P31151 101 aa9.76□□□□□ -0.85
DDX39A-202ENST00000324340 PROK1P58294 105 aa9.76□□□□□ -0.85
DDX39A-202ENST00000324340 SLAQ13239 276 aa9.76□□□□□ -0.85
DDX39A-202ENST00000324340 GPHB5Q86YW7 130 aa9.76□□□□□ -0.85
DDX39A-202ENST00000324340 ATOH7Q8N100 152 aa9.76□□□□□ -0.85
DDX39A-202ENST00000324340 MAP1LC3CQ9BXW4 147 aa9.76□□□□□ -0.85
DDX39A-202ENST00000324340 TMEM14CQ9P0S9 112 aa9.76□□□□□ -0.85
DDX39A-202ENST00000324340 RABAC1Q9UI14 185 aa9.76□□□□□ -0.85
DDX39A-202ENST00000324340 NSD1Q96L73 2696 aaPredicted RBP9.76□□□□□ -0.85
DDX39A-202ENST00000324340 IGHV3-35A0A0C4DH35 117 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 FAM231BA6NCW3 169 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 LEPROTL1O95214 131 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 FRMD6-AS1P0C7T7 363 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 HIST1H1EP10412 219 aaKnown RBP9.75□□□□□ -0.85
DDX39A-202ENST00000324340 GP9P14770 177 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 TMEM97Q5BJF2 176 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 RNASEKQ6P5S7 137 aaKnown RBP9.75□□□□□ -0.85
DDX39A-202ENST00000324340 BPIFA4PQ86YQ2 179 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 OR9G4Q8NGQ1 327 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 C4orf3Q8WVX3 66 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 U3KQE9 123 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 LINC01545Q5VT33 79 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 C5orf17Q8NAS9 161 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 FXYD5Q96DB9 178 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 NDFIP1Q9BT67 221 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 PAXXQ9BUH6 204 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 GFRA4Q9GZZ7 299 aa9.75□□□□□ -0.85
DDX39A-202ENST00000324340 J3QR89 54 aa9.74□□□□□ -0.85
DDX39A-202ENST00000324340 MRPS12O15235 138 aaKnown RBP9.74□□□□□ -0.85
DDX39A-202ENST00000324340 UNQ9165/PRO28630Q6UXU0 137 aa9.74□□□□□ -0.85
DDX39A-202ENST00000324340 FA2HQ7L5A8 372 aa9.74□□□□□ -0.85
DDX39A-202ENST00000324340 OR2K2Q8NGT1 345 aa9.74□□□□□ -0.85
DDX39A-202ENST00000324340 METTL26Q96S19 204 aa9.74□□□□□ -0.85
DDX39A-202ENST00000324340 RNASE7Q9H1E1 156 aaKnown RBP9.74□□□□□ -0.85
DDX39A-202ENST00000324340 MTORP42345 2549 aa9.73□□□□□ -0.85
DDX39A-202ENST00000324340 IGHV4OR15-8A0A075B7B6 117 aa9.73□□□□□ -0.85
DDX39A-202ENST00000324340 IGHV3OR16-8A0A075B7F1 116 aa9.73□□□□□ -0.85
DDX39A-202ENST00000324340 A0A087WW49 117 aa9.73□□□□□ -0.85
DDX39A-202ENST00000324340 K7EMT4 169 aa9.73□□□□□ -0.85
DDX39A-202ENST00000324340 LGALS9O00182 355 aa9.73□□□□□ -0.85
DDX39A-202ENST00000324340 BUB3O43684 328 aa9.73□□□□□ -0.85
DDX39A-202ENST00000324340 PYYP10082 97 aa9.73□□□□□ -0.85
DDX39A-202ENST00000324340 CD28P10747 220 aa9.73□□□□□ -0.85
DDX39A-202ENST00000324340 UBE2L3P68036 154 aaKnown RBP9.73□□□□□ -0.85
DDX39A-202ENST00000324340 HBBP68871 147 aa9.73□□□□□ -0.85
DDX39A-202ENST00000324340 HSD52Q0P140 79 aa9.73□□□□□ -0.85
DDX39A-202ENST00000324340 SIGMAR1Q99720 223 aa9.73□□□□□ -0.85
DDX39A-202ENST00000324340 SRSF2Q01130 221 aaKnown RBP9.72□□□□□ -0.85
DDX39A-202ENST00000324340 KRTAP21-3Q3LHN1 58 aa9.72□□□□□ -0.85
DDX39A-202ENST00000324340 FAM106AQ4KMX7 169 aa9.72□□□□□ -0.85
DDX39A-202ENST00000324340 C18orf65Q6ZTR6 163 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms