RNA–Protein interactions for RNA: ENST00000321337.11

SENP3-201, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SENP3, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-201ENST00000321337 CEND1Q8N111 149 aa19.48■□□□□ 0.71
SENP3-201ENST00000321337 EFNA4P52798 201 aa19.48■□□□□ 0.71
SENP3-201ENST00000321337 Q8N8P6 123 aa19.48■□□□□ 0.71
SENP3-201ENST00000321337 CEACAM3P40198 252 aa19.47■□□□□ 0.71
SENP3-201ENST00000321337 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.47■□□□□ 0.71
SENP3-201ENST00000321337 AGPAT4-IT1Q9H0P7 198 aa19.47■□□□□ 0.71
SENP3-201ENST00000321337 ZFHX2Q9C0A1 2572 aaPredicted RBP19.47■□□□□ 0.71
SENP3-201ENST00000321337 SPRY2O43597 315 aa19.46■□□□□ 0.71
SENP3-201ENST00000321337 SRSF2Q01130 221 aaKnown RBP19.46■□□□□ 0.71
SENP3-201ENST00000321337 AGRNO00468 2067 aa19.46■□□□□ 0.71
SENP3-201ENST00000321337 HRNRQ86YZ3 2850 aaPredicted RBP19.46■□□□□ 0.71
SENP3-201ENST00000321337 IGHV7-81A0A0B4J1V7 117 aa19.46■□□□□ 0.71
SENP3-201ENST00000321337 NRACQ8N912 160 aa19.46■□□□□ 0.71
SENP3-201ENST00000321337 UFC1Q9Y3C8 167 aa19.46■□□□□ 0.71
SENP3-201ENST00000321337 WFDC2Q14508 124 aa19.45■□□□□ 0.7
SENP3-201ENST00000321337 MTURNQ8N3F0 131 aa19.45■□□□□ 0.7
SENP3-201ENST00000321337 TM2D2Q9BX73 214 aa19.45■□□□□ 0.7
SENP3-201ENST00000321337 ANKHD1Q8IWZ3 2542 aaKnown RBP19.45■□□□□ 0.7
SENP3-201ENST00000321337 FAM90A27PA6NNH2 459 aa19.44■□□□□ 0.7
SENP3-201ENST00000321337 BUB3O43684 328 aa19.44■□□□□ 0.7
SENP3-201ENST00000321337 ZFAND3Q9H8U3 227 aa19.44■□□□□ 0.7
SENP3-201ENST00000321337 CLEC3BP05452 202 aa19.43■□□□□ 0.7
SENP3-201ENST00000321337 C15orf32Q32M92 178 aa19.43■□□□□ 0.7
SENP3-201ENST00000321337 Q8N6K4 173 aa19.43■□□□□ 0.7
SENP3-201ENST00000321337 IGHV7-4-1A0A0J9YVY3 117 aa19.43■□□□□ 0.7
SENP3-201ENST00000321337 IGLL5B9A064 214 aa19.43■□□□□ 0.7
SENP3-201ENST00000321337 AMTNQ6UX39 209 aa19.43■□□□□ 0.7
SENP3-201ENST00000321337 VMO1Q7Z5L0 202 aa19.43■□□□□ 0.7
SENP3-201ENST00000321337 TLN1Q9Y490 2541 aaKnown RBP19.43■□□□□ 0.7
SENP3-201ENST00000321337 ATP5LO75964 103 aa19.42■□□□□ 0.7
SENP3-201ENST00000321337 PRTN3P24158 256 aa19.42■□□□□ 0.7
SENP3-201ENST00000321337 ECSCRQ19T08 205 aa19.42■□□□□ 0.7
SENP3-201ENST00000321337 TMEM11P17152 192 aa19.42■□□□□ 0.7
SENP3-201ENST00000321337 CLPSL1A2RUU4 121 aa19.41■□□□□ 0.7
SENP3-201ENST00000321337 E9PLD3 99 aa19.41■□□□□ 0.7
SENP3-201ENST00000321337 TRAV8-2A0A0B4J237 113 aa19.41■□□□□ 0.7
SENP3-201ENST00000321337 GTSF1LQ9H1H1 148 aa19.41■□□□□ 0.7
SENP3-201ENST00000321337 LAGE3Q14657 143 aa19.4■□□□□ 0.7
SENP3-201ENST00000321337 H3BMG7 143 aa19.4■□□□□ 0.7
SENP3-201ENST00000321337 SH2D6Q7Z4S9 175 aa19.39■□□□□ 0.7
SENP3-201ENST00000321337 ZNF502Q8TBZ5 544 aa19.39■□□□□ 0.7
SENP3-201ENST00000321337 MYOZ3Q8TDC0 251 aa19.39■□□□□ 0.7
SENP3-201ENST00000321337 KLK15Q9H2R5 256 aa19.39■□□□□ 0.7
SENP3-201ENST00000321337 CDSNQ15517 529 aa19.39■□□□□ 0.69
SENP3-201ENST00000321337 C12orf74Q32Q52 190 aa19.39■□□□□ 0.69
SENP3-201ENST00000321337 LCNL1Q6ZST4 164 aa19.39■□□□□ 0.69
SENP3-201ENST00000321337 SMPXQ9UHP9 88 aa19.39■□□□□ 0.69
SENP3-201ENST00000321337 LINC01548A6NM66 108 aa19.38■□□□□ 0.69
SENP3-201ENST00000321337 Q8N9W7 124 aa19.38■□□□□ 0.69
SENP3-201ENST00000321337 MSRB2Q9Y3D2 182 aa19.38■□□□□ 0.69
SENP3-201ENST00000321337 A0A087WX48 190 aa19.38■□□□□ 0.69
SENP3-201ENST00000321337 J3KRW8 73 aa19.38■□□□□ 0.69
SENP3-201ENST00000321337 IGF1P05019 195 aa19.38■□□□□ 0.69
SENP3-201ENST00000321337 CLEC19AQ6UXS0 136 aa19.38■□□□□ 0.69
SENP3-201ENST00000321337 ZNF479Q96JC4 524 aa19.38■□□□□ 0.69
SENP3-201ENST00000321337 PRR9Q5T870 116 aa19.37■□□□□ 0.69
SENP3-201ENST00000321337 SPANXB1Q9NS25 103 aaPredicted RBP19.37■□□□□ 0.69
SENP3-201ENST00000321337 G3V318 75 aa19.37■□□□□ 0.69
SENP3-201ENST00000321337 M0R1W7 72 aa19.37■□□□□ 0.69
SENP3-201ENST00000321337 SAMD13Q5VXD3 122 aa19.37■□□□□ 0.69
SENP3-201ENST00000321337 FOXI2Q6ZQN5 318 aa19.37■□□□□ 0.69
SENP3-201ENST00000321337 CCDC140Q96MF4 163 aa19.37■□□□□ 0.69
SENP3-201ENST00000321337 AZU1P20160 251 aa19.36■□□□□ 0.69
SENP3-201ENST00000321337 TSSC4Q9Y5U2 329 aaPredicted RBP19.36■□□□□ 0.69
SENP3-201ENST00000321337 NBASA2RRP1 2371 aa19.36■□□□□ 0.69
SENP3-201ENST00000321337 H3BVH4 76 aa19.36■□□□□ 0.69
SENP3-201ENST00000321337 ZFP36P26651 326 aaKnown RBP19.36■□□□□ 0.69
SENP3-201ENST00000321337 HIST1H4GQ99525 98 aa19.35■□□□□ 0.69
SENP3-201ENST00000321337 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.35■□□□□ 0.69
SENP3-201ENST00000321337 ETDBQ3ZM63 59 aa19.35■□□□□ 0.69
SENP3-201ENST00000321337 SPANXN1Q5VSR9 72 aa19.35■□□□□ 0.69
SENP3-201ENST00000321337 RBAKDNA6NC62 111 aa19.34■□□□□ 0.69
SENP3-201ENST00000321337 ATP6V0E1O15342 81 aa19.34■□□□□ 0.69
SENP3-201ENST00000321337 SMAGPQ0VAQ4 97 aa19.34■□□□□ 0.69
SENP3-201ENST00000321337 PSMG4Q5JS54 123 aa19.33■□□□□ 0.69
SENP3-201ENST00000321337 TMEM78Q5T7P6 136 aa19.33■□□□□ 0.69
SENP3-201ENST00000321337 C8orf86Q6ZUL3 223 aa19.33■□□□□ 0.68
SENP3-201ENST00000321337 SRSF1Q07955 248 aaKnown RBP eCLIP19.32■□□□□ 0.683e-10■■□□□ 12.7
SENP3-201ENST00000321337 EBI3Q14213 229 aa19.32■□□□□ 0.68
SENP3-201ENST00000321337 SCGB2A1O75556 95 aa19.32■□□□□ 0.68
SENP3-201ENST00000321337 INSL3P51460 131 aa19.32■□□□□ 0.68
SENP3-201ENST00000321337 DEFB1P60022 68 aa19.32■□□□□ 0.68
SENP3-201ENST00000321337 CCDC144NLQ6NUI1 221 aa19.32■□□□□ 0.68
SENP3-201ENST00000321337 TIMD4Q96H15 378 aa19.32■□□□□ 0.68
SENP3-201ENST00000321337 TRBV7-3A0A075B6L6 115 aa19.31■□□□□ 0.68
SENP3-201ENST00000321337 HLA-DRB4P13762 266 aa19.31■□□□□ 0.68
SENP3-201ENST00000321337 HLA-DRB4X5D2U9 266 aa19.31■□□□□ 0.68
SENP3-201ENST00000321337 VKORC1Q9BQB6 163 aa19.31■□□□□ 0.68
SENP3-201ENST00000321337 SLC50A1Q9BRV3 221 aa19.31■□□□□ 0.68
SENP3-201ENST00000321337 PRSS47A8MTI9 375 aa19.3■□□□□ 0.68
SENP3-201ENST00000321337 FAM110DQ8TAY7 271 aaPredicted RBP19.3■□□□□ 0.68
SENP3-201ENST00000321337 SPAG8Q99932 426 aaPredicted RBP19.3■□□□□ 0.68
SENP3-201ENST00000321337 RPL39LQ96EH5 51 aaKnown RBP19.29■□□□□ 0.68
SENP3-201ENST00000321337 CYSLTR1Q9Y271 337 aa19.29■□□□□ 0.68
SENP3-201ENST00000321337 CEP295Q9C0D2 2601 aa19.29■□□□□ 0.68
SENP3-201ENST00000321337 F8W1H4 67 aa19.28■□□□□ 0.68
SENP3-201ENST00000321337 C20orf173Q96LM9 149 aa19.28■□□□□ 0.68
SENP3-201ENST00000321337 SMIM2Q9BVW6 85 aa19.28■□□□□ 0.68
SENP3-201ENST00000321337 GAGE12HA6NDE8 117 aa19.28■□□□□ 0.68
SENP3-201ENST00000321337 DEFB104AQ8WTQ1 72 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms