RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 SHISA9B4DS77 424 aa9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 C9orf139Q6ZV77 190 aa9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 CEND1Q8N111 149 aa9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 DYNAPQ8N1N2 210 aa9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 URB1-AS1Q96HZ7 61 aa9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 PGPEP1Q9NXJ5 209 aa9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 IGKV3-20P01619 116 aa9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 ZNF493Q6ZR52 646 aa9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 TTTY13Q9BZ97 58 aa9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 TRBV25-1A0A075B6N4 114 aa9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 PRR30Q53SZ7 412 aaPredicted RBP9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 C7orf69Q9H7B7 122 aa9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 ZNF256Q9Y2P7 627 aaPredicted RBP9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 OVOL1O14753 267 aa9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 EFNA4P52798 201 aa9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 TSSC4Q9Y5U2 329 aaPredicted RBP9.99□□□□□ -0.81
DNMT3A-202ENST00000321117 PIEZO2Q9H5I5 2752 aa9.98□□□□□ -0.81
DNMT3A-202ENST00000321117 LCNL1Q6ZST4 164 aa9.98□□□□□ -0.81
DNMT3A-202ENST00000321117 DLX4Q92988 240 aaPredicted RBP9.98□□□□□ -0.81
DNMT3A-202ENST00000321117 BEX4Q9NWD9 120 aaPredicted RBP9.98□□□□□ -0.81
DNMT3A-202ENST00000321117 TMEM238C9JI98 176 aa9.98□□□□□ -0.81
DNMT3A-202ENST00000321117 FXYD2P54710 66 aa9.98□□□□□ -0.81
DNMT3A-202ENST00000321117 FAM110DQ8TAY7 271 aaPredicted RBP9.98□□□□□ -0.81
DNMT3A-202ENST00000321117 F8W1H4 67 aa9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 MRAP2Q96G30 205 aa9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 IGLV11-55A0A075B6I3 123 aa9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 TRBV7-1A0A0A6YYK4 115 aa9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 TEX48A0A1B0GUV7 120 aa9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 WI2-2373I1.2A0A1W2PRP0 233 aa9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 H3BMG7 143 aa9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 ATP6V0E1O15342 81 aa9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 COX6CP09669 75 aa9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 TTC32Q5I0X7 151 aa9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 LINC00477Q96M19 166 aa9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 F8VRH5 84 aa9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 SUMO2P61956 95 aaKnown RBP9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 TMEM219Q86XT9 240 aa9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 DEFB104AQ8WTQ1 72 aa9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 NPFFR1Q9GZQ6 430 aa9.97□□□□□ -0.81
DNMT3A-202ENST00000321117 TRAV41A0A0B4J266 112 aa9.96□□□□□ -0.81
DNMT3A-202ENST00000321117 CD7P09564 240 aa9.96□□□□□ -0.81
DNMT3A-202ENST00000321117 CKS1BP61024 79 aa9.96□□□□□ -0.81
DNMT3A-202ENST00000321117 CLEC2AQ6UVW9 174 aa9.96□□□□□ -0.81
DNMT3A-202ENST00000321117 AMTNQ6UX39 209 aa9.96□□□□□ -0.81
DNMT3A-202ENST00000321117 SMIM2Q9BVW6 85 aa9.96□□□□□ -0.81
DNMT3A-202ENST00000321117 TAL2Q16559 108 aa9.96□□□□□ -0.82
DNMT3A-202ENST00000321117 C2orf66Q6UXQ4 117 aa9.96□□□□□ -0.82
DNMT3A-202ENST00000321117 AGPAT4-IT1Q9H0P7 198 aa9.96□□□□□ -0.82
DNMT3A-202ENST00000321117 G3V318 75 aa9.96□□□□□ -0.82
DNMT3A-202ENST00000321117 UCNP55089 124 aa9.96□□□□□ -0.82
DNMT3A-202ENST00000321117 C8orf86Q6ZUL3 223 aa9.96□□□□□ -0.82
DNMT3A-202ENST00000321117 CFHR4Q92496 578 aa9.96□□□□□ -0.82
DNMT3A-202ENST00000321117 IGLV2-11P01706 119 aa9.95□□□□□ -0.82
DNMT3A-202ENST00000321117 C12orf74Q32Q52 190 aa9.95□□□□□ -0.82
DNMT3A-202ENST00000321117 A0A087WX48 190 aa9.95□□□□□ -0.82
DNMT3A-202ENST00000321117 A8MWV9 139 aa9.95□□□□□ -0.82
DNMT3A-202ENST00000321117 MYMXA0A1B0GTQ4 84 aa9.95□□□□□ -0.82
DNMT3A-202ENST00000321117 LINC01549A6NIU2 74 aa9.95□□□□□ -0.82
DNMT3A-202ENST00000321117 EMP1P54849 157 aa9.95□□□□□ -0.82
DNMT3A-202ENST00000321117 VCX2Q9H322 139 aa9.95□□□□□ -0.82
DNMT3A-202ENST00000321117 CTSGP08311 255 aa9.94□□□□□ -0.82
DNMT3A-202ENST00000321117 CRIP1P50238 77 aa9.94□□□□□ -0.82
DNMT3A-202ENST00000321117 C2orf91Q6ZV80 131 aa9.94□□□□□ -0.82
DNMT3A-202ENST00000321117 OR11H6Q8NGC7 330 aa9.94□□□□□ -0.82
DNMT3A-202ENST00000321117 SAA4P35542 130 aa9.94□□□□□ -0.82
DNMT3A-202ENST00000321117 KLRB1Q12918 225 aa9.94□□□□□ -0.82
DNMT3A-202ENST00000321117 ODF1Q14990 250 aa9.94□□□□□ -0.82
DNMT3A-202ENST00000321117 HIGD1BQ9P298 99 aa9.94□□□□□ -0.82
DNMT3A-202ENST00000321117 GAGE12HA6NDE8 117 aa9.94□□□□□ -0.82
DNMT3A-202ENST00000321117 NPBQ8NG41 125 aa9.94□□□□□ -0.82
DNMT3A-202ENST00000321117 SNRPD3P62318 126 aaKnown RBP9.93□□□□□ -0.82
DNMT3A-202ENST00000321117 RUSC1-AS1Q66K80 236 aa9.93□□□□□ -0.82
DNMT3A-202ENST00000321117 CRYGBP07316 175 aa9.93□□□□□ -0.82
DNMT3A-202ENST00000321117 HLA-DRB4P13762 266 aa9.93□□□□□ -0.82
DNMT3A-202ENST00000321117 SRD5A1P18405 259 aa9.93□□□□□ -0.82
DNMT3A-202ENST00000321117 AZU1P20160 251 aa9.93□□□□□ -0.82
DNMT3A-202ENST00000321117 PRADC1Q9BSG0 188 aa9.93□□□□□ -0.82
DNMT3A-202ENST00000321117 HLA-DRB4X5D2U9 266 aa9.93□□□□□ -0.82
DNMT3A-202ENST00000321117 WFDC12Q8WWY7 111 aa9.93□□□□□ -0.82
DNMT3A-202ENST00000321117 MOB4Q9Y3A3 225 aa9.93□□□□□ -0.82
DNMT3A-202ENST00000321117 G3V4G9 280 aa9.93□□□□□ -0.82
DNMT3A-202ENST00000321117 SLC25A16P16260 332 aa9.93□□□□□ -0.82
DNMT3A-202ENST00000321117 FANCD2OSQ96PS1 177 aa9.93□□□□□ -0.82
DNMT3A-202ENST00000321117 K7EMI3 77 aa9.92□□□□□ -0.82
DNMT3A-202ENST00000321117 SPG11Q96JI7 2443 aa9.92□□□□□ -0.82
DNMT3A-202ENST00000321117 TRAV2A0A0B4J234 112 aa9.92□□□□□ -0.82
DNMT3A-202ENST00000321117 IGLL5B9A064 214 aa9.92□□□□□ -0.82
DNMT3A-202ENST00000321117 PRAC2D3DTV9 90 aa9.92□□□□□ -0.82
DNMT3A-202ENST00000321117 ZNF80P51504 273 aaPredicted RBP9.92□□□□□ -0.82
DNMT3A-202ENST00000321117 FOXE3Q13461 319 aa9.92□□□□□ -0.82
DNMT3A-202ENST00000321117 TRAV8-2A0A0B4J237 113 aa9.91□□□□□ -0.82
DNMT3A-202ENST00000321117 VCYO14598 125 aa9.91□□□□□ -0.82
DNMT3A-202ENST00000321117 RBAKDNA6NC62 111 aa9.91□□□□□ -0.82
DNMT3A-202ENST00000321117 NPFFO15130 113 aa9.91□□□□□ -0.82
DNMT3A-202ENST00000321117 RRN3P1Q2M238 152 aa9.9□□□□□ -0.82
DNMT3A-202ENST00000321117 SH2D6Q7Z4S9 175 aa9.9□□□□□ -0.82
DNMT3A-202ENST00000321117 ANAPC13Q9BS18 74 aa9.9□□□□□ -0.82
DNMT3A-202ENST00000321117 TLN1Q9Y490 2541 aaKnown RBP9.9□□□□□ -0.82
DNMT3A-202ENST00000321117 UBE2E1P51965 193 aa9.9□□□□□ -0.82
DNMT3A-202ENST00000321117 FOXI2Q6ZQN5 318 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms