RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 PRRG2O14669 202 aa13.15□□□□□ -0.3
PACS1-201ENST00000320580 C14orf178Q8N769 122 aaPredicted RBP13.15□□□□□ -0.3
PACS1-201ENST00000320580 M0R2P5 195 aa13.15□□□□□ -0.3
PACS1-201ENST00000320580 KLHL30-AS1Q8NEE0 82 aa13.15□□□□□ -0.3
PACS1-201ENST00000320580 SPRR3Q9UBC9 169 aa13.15□□□□□ -0.3
PACS1-201ENST00000320580 EIF4EBP1Q13541 118 aaPredicted RBP13.14□□□□□ -0.31
PACS1-201ENST00000320580 RPL32P62910 135 aaKnown RBP13.14□□□□□ -0.31
PACS1-201ENST00000320580 FOXE3Q13461 319 aa13.14□□□□□ -0.31
PACS1-201ENST00000320580 C1orf159Q96HA4 380 aa13.14□□□□□ -0.31
PACS1-201ENST00000320580 ATG2AQ2TAZ0 1938 aa13.14□□□□□ -0.31
PACS1-201ENST00000320580 IL17RELQ6ZVW7 336 aa13.14□□□□□ -0.31
PACS1-201ENST00000320580 C9orf106Q8NAJ2 232 aa13.14□□□□□ -0.31
PACS1-201ENST00000320580 GAFA1Q96PS6 74 aa13.14□□□□□ -0.31
PACS1-201ENST00000320580 TMEM14CQ9P0S9 112 aa13.14□□□□□ -0.31
PACS1-201ENST00000320580 HLA-DMBP28068 263 aa13.13□□□□□ -0.31
PACS1-201ENST00000320580 TMEM200BQ69YZ2 307 aa13.13□□□□□ -0.31
PACS1-201ENST00000320580 C1orf162Q8NEQ5 155 aaPredicted RBP13.13□□□□□ -0.31
PACS1-201ENST00000320580 MAPKAPK5-AS1Q8N8E1 139 aa13.13□□□□□ -0.31
PACS1-201ENST00000320580 SIGLEC9Q9Y336 463 aa13.13□□□□□ -0.31
PACS1-201ENST00000320580 CIRBPQ14011 172 aaKnown RBP13.12□□□□□ -0.31
PACS1-201ENST00000320580 MRPL23Q16540 153 aaKnown RBP13.12□□□□□ -0.31
PACS1-201ENST00000320580 SS18L1O75177 396 aaPredicted RBP13.12□□□□□ -0.31
PACS1-201ENST00000320580 CD59P13987 128 aa13.12□□□□□ -0.31
PACS1-201ENST00000320580 DIAPH2-AS1Q14236 149 aa13.12□□□□□ -0.31
PACS1-201ENST00000320580 GATA3P23771 443 aa13.12□□□□□ -0.31
PACS1-201ENST00000320580 E7EUB6 86 aa13.11□□□□□ -0.31
PACS1-201ENST00000320580 IGKV3-15P01624 115 aa13.11□□□□□ -0.31
PACS1-201ENST00000320580 SHISA2Q6UWI4 295 aa13.11□□□□□ -0.31
PACS1-201ENST00000320580 IGHV1-46P01743 117 aa13.11□□□□□ -0.31
PACS1-201ENST00000320580 CNTFRP26992 372 aa13.11□□□□□ -0.31
PACS1-201ENST00000320580 PDE6HQ13956 83 aa13.11□□□□□ -0.31
PACS1-201ENST00000320580 TMEM190Q8WZ59 177 aa13.11□□□□□ -0.31
PACS1-201ENST00000320580 EYSQ5T1H1 3165 aa13.11□□□□□ -0.31
PACS1-201ENST00000320580 CCDC179H3BU77 68 aa13.11□□□□□ -0.31
PACS1-201ENST00000320580 SUMO2P61956 95 aaKnown RBP13.11□□□□□ -0.31
PACS1-201ENST00000320580 NAV3Q8IVL0 2385 aa13.11□□□□□ -0.31
PACS1-201ENST00000320580 A0A0U1RRA0 63 aa13.11□□□□□ -0.31
PACS1-201ENST00000320580 GAGE2AQ6NT46 116 aa13.1□□□□□ -0.31
PACS1-201ENST00000320580 SMIM2Q9BVW6 85 aa13.1□□□□□ -0.31
PACS1-201ENST00000320580 TCL1BO95988 128 aa13.1□□□□□ -0.31
PACS1-201ENST00000320580 MALRD1Q5VYJ5 2156 aa13.1□□□□□ -0.31
PACS1-201ENST00000320580 ZNF474Q6S9Z5 364 aaPredicted RBP13.1□□□□□ -0.31
PACS1-201ENST00000320580 LY6G6EA0A0G2JKS1 128 aa13.09□□□□□ -0.31
PACS1-201ENST00000320580 DNAL4O96015 105 aa13.09□□□□□ -0.31
PACS1-201ENST00000320580 RNF182Q8N6D2 247 aa13.09□□□□□ -0.31
PACS1-201ENST00000320580 U3KQA8 63 aa13.09□□□□□ -0.31
PACS1-201ENST00000320580 CFC1BP0CG36 223 aa13.09□□□□□ -0.31
PACS1-201ENST00000320580 CFC1P0CG37 223 aa13.09□□□□□ -0.31
PACS1-201ENST00000320580 K7EM74 188 aa13.09□□□□□ -0.31
PACS1-201ENST00000320580 UTF1Q5T230 341 aa13.09□□□□□ -0.31
PACS1-201ENST00000320580 RNASE4P34096 147 aaKnown RBP13.09□□□□□ -0.31
PACS1-201ENST00000320580 FAM57AQ8TBR7 257 aa13.09□□□□□ -0.31
PACS1-201ENST00000320580 NTN3O00634 580 aaPredicted RBP13.08□□□□□ -0.32
PACS1-201ENST00000320580 ZNF883P0CG24 379 aa13.08□□□□□ -0.32
PACS1-201ENST00000320580 ZNF833PQ6ZTB9 187 aa13.08□□□□□ -0.32
PACS1-201ENST00000320580 SLC50A1Q9BRV3 221 aa13.08□□□□□ -0.32
PACS1-201ENST00000320580 CDX4O14627 284 aaPredicted RBP13.08□□□□□ -0.32
PACS1-201ENST00000320580 SIGLEC15Q6ZMC9 328 aa13.08□□□□□ -0.32
PACS1-201ENST00000320580 DPH3P1Q9H4G8 78 aa13.08□□□□□ -0.32
PACS1-201ENST00000320580 LGALS1P09382 135 aaKnown RBP13.08□□□□□ -0.32
PACS1-201ENST00000320580 H3BRN7 92 aa13.07□□□□□ -0.32
PACS1-201ENST00000320580 TRPT1Q86TN4 253 aaKnown RBP13.07□□□□□ -0.32
PACS1-201ENST00000320580 TP53TG1Q9Y2A0 90 aa13.07□□□□□ -0.32
PACS1-201ENST00000320580 ABCA4P78363 2273 aa13.07□□□□□ -0.32
PACS1-201ENST00000320580 ZNF493Q6ZR52 646 aa13.07□□□□□ -0.32
PACS1-201ENST00000320580 PIEZO1Q92508 2521 aa13.07□□□□□ -0.32
PACS1-201ENST00000320580 TMEM126AQ9H061 195 aa13.07□□□□□ -0.32
PACS1-201ENST00000320580 IGKV1D-37A0A075B6S9 117 aa13.06□□□□□ -0.32
PACS1-201ENST00000320580 FAM27E3Q08E93 113 aa13.06□□□□□ -0.32
PACS1-201ENST00000320580 FAM236AA0A1B0GUQ0 79 aa13.06□□□□□ -0.32
PACS1-201ENST00000320580 FAM236BA0A1B0GV22 79 aa13.06□□□□□ -0.32
PACS1-201ENST00000320580 NBR2O15453 112 aa13.06□□□□□ -0.32
PACS1-201ENST00000320580 CFAP126Q5VTH2 177 aa13.06□□□□□ -0.32
PACS1-201ENST00000320580 TIMM23O14925 209 aa13.06□□□□□ -0.32
PACS1-201ENST00000320580 C1orf229Q6ZS94 237 aaPredicted RBP13.06□□□□□ -0.32
PACS1-201ENST00000320580 VCANP13611 3396 aa13.06□□□□□ -0.32
PACS1-201ENST00000320580 C16orf97H3BN30 126 aa13.05□□□□□ -0.32
PACS1-201ENST00000320580 CARD19Q96LW7 228 aa13.05□□□□□ -0.32
PACS1-201ENST00000320580 IGKV3D-20A0A0C4DH25 116 aa13.05□□□□□ -0.32
PACS1-201ENST00000320580 CLEC19AQ6UXS0 136 aa13.05□□□□□ -0.32
PACS1-201ENST00000320580 IGHV1-3A0A0C4DH29 117 aa13.04□□□□□ -0.32
PACS1-201ENST00000320580 CR1LQ2VPA4 569 aa13.04□□□□□ -0.32
PACS1-201ENST00000320580 AGRNO00468 2067 aa13.04□□□□□ -0.32
PACS1-201ENST00000320580 MUC22E2RYF6 1773 aaPredicted RBP13.04□□□□□ -0.32
PACS1-201ENST00000320580 TRAV21A0A0B4J279 112 aa13.04□□□□□ -0.32
PACS1-201ENST00000320580 A4D1N5 150 aa13.04□□□□□ -0.32
PACS1-201ENST00000320580 C17orf100A8MU93 164 aa13.04□□□□□ -0.32
PACS1-201ENST00000320580 J3QQQ9 107 aa13.04□□□□□ -0.32
PACS1-201ENST00000320580 LINC01620Q4KN68 170 aa13.04□□□□□ -0.32
PACS1-201ENST00000320580 PLEKHB2Q96CS7 222 aa13.04□□□□□ -0.32
PACS1-201ENST00000320580 DPM3Q9P2X0 92 aa13.04□□□□□ -0.32
PACS1-201ENST00000320580 IGHV1-8P0DP01 117 aa13.04□□□□□ -0.32
PACS1-201ENST00000320580 ZNF491Q8N8L2 437 aa13.04□□□□□ -0.32
PACS1-201ENST00000320580 TRAV4A0A0B4J268 109 aa13.03□□□□□ -0.32
PACS1-201ENST00000320580 IGKV3-20P01619 116 aa13.03□□□□□ -0.32
PACS1-201ENST00000320580 CHCHD5Q9BSY4 110 aa13.03□□□□□ -0.32
PACS1-201ENST00000320580 SPXQ9BT56 116 aa13.03□□□□□ -0.32
PACS1-201ENST00000320580 CEP295Q9C0D2 2601 aa13.03□□□□□ -0.32
PACS1-201ENST00000320580 SPRY2O43597 315 aa13.03□□□□□ -0.32
PACS1-201ENST00000320580 NDUFA11Q86Y39 141 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms