RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 FANCD2OSQ96PS1 177 aa10.17□□□□□ -0.78
CPNE1-201ENST00000317677 FLNAP21333 2647 aaKnown RBP10.17□□□□□ -0.78
CPNE1-201ENST00000317677 E9PLD3 99 aa10.17□□□□□ -0.78
CPNE1-201ENST00000317677 FAM106CPP0CH98 169 aa10.17□□□□□ -0.78
CPNE1-201ENST00000317677 CT45A10P0DMU9 189 aa10.17□□□□□ -0.78
CPNE1-201ENST00000317677 CSN1S1P47710 185 aa10.17□□□□□ -0.78
CPNE1-201ENST00000317677 FOXA3P55318 350 aaPredicted RBP10.17□□□□□ -0.78
CPNE1-201ENST00000317677 WFDC2Q14508 124 aa10.17□□□□□ -0.78
CPNE1-201ENST00000317677 PHLDA1Q8WV24 401 aaPredicted RBP10.17□□□□□ -0.78
CPNE1-201ENST00000317677 TRGV9Q99603 122 aa10.17□□□□□ -0.78
CPNE1-201ENST00000317677 FAM110AQ9BQ89 295 aa10.17□□□□□ -0.78
CPNE1-201ENST00000317677 PRSS22Q9GZN4 317 aa10.17□□□□□ -0.78
CPNE1-201ENST00000317677 CYSLTR1Q9Y271 337 aa10.17□□□□□ -0.78
CPNE1-201ENST00000317677 ACANP16112 2415 aa10.17□□□□□ -0.78
CPNE1-201ENST00000317677 CR1P17927 2039 aa10.16□□□□□ -0.78
CPNE1-201ENST00000317677 NPIPB5A8MRT5 1133 aa10.16□□□□□ -0.78
CPNE1-201ENST00000317677 FCGR2BP31994 310 aaPredicted RBP10.16□□□□□ -0.78
CPNE1-201ENST00000317677 DSCR9P59020 149 aa10.16□□□□□ -0.78
CPNE1-201ENST00000317677 C8orf86Q6ZUL3 223 aa10.16□□□□□ -0.78
CPNE1-201ENST00000317677 MCRIP2Q9BUT9 160 aaKnown RBP10.16□□□□□ -0.78
CPNE1-201ENST00000317677 TMUB1Q9BVT8 246 aa10.16□□□□□ -0.78
CPNE1-201ENST00000317677 SLC25A2Q9BXI2 301 aa10.16□□□□□ -0.78
CPNE1-201ENST00000317677 PSG8Q9UQ74 426 aa10.16□□□□□ -0.78
CPNE1-201ENST00000317677 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.16□□□□□ -0.788e-8■■■■□ 20.6
CPNE1-201ENST00000317677 SETD2Q9BYW2 2564 aaPredicted RBP10.16□□□□□ -0.78
CPNE1-201ENST00000317677 IGLV11-55A0A075B6I3 123 aa10.15□□□□□ -0.78
CPNE1-201ENST00000317677 A8MWL6 223 aa10.15□□□□□ -0.78
CPNE1-201ENST00000317677 SLC25A16P16260 332 aa10.15□□□□□ -0.78
CPNE1-201ENST00000317677 LINC01548A6NM66 108 aa10.15□□□□□ -0.78
CPNE1-201ENST00000317677 C8orf88P0DMB2 117 aa10.15□□□□□ -0.78
CPNE1-201ENST00000317677 GAGE5Q13069 117 aa10.15□□□□□ -0.78
CPNE1-201ENST00000317677 GAGE6Q13070 117 aa10.15□□□□□ -0.78
CPNE1-201ENST00000317677 LRRC75A-AS1Q8N1F1 130 aa10.15□□□□□ -0.78
CPNE1-201ENST00000317677 HIF1ANQ9NWT6 349 aa10.15□□□□□ -0.78
CPNE1-201ENST00000317677 S4R3C0 116 aa10.15□□□□□ -0.78
CPNE1-201ENST00000317677 B4DSR2 109 aa10.14□□□□□ -0.79
CPNE1-201ENST00000317677 F8W735 103 aaPredicted RBP10.14□□□□□ -0.79
CPNE1-201ENST00000317677 IGKV1-17P01599 117 aa10.14□□□□□ -0.79
CPNE1-201ENST00000317677 TMEM219Q86XT9 240 aa10.14□□□□□ -0.79
CPNE1-201ENST00000317677 MAPK1IP1LQ8NDC0 245 aa10.14□□□□□ -0.79
CPNE1-201ENST00000317677 MRPL32Q9BYC8 188 aaKnown RBP10.14□□□□□ -0.79
CPNE1-201ENST00000317677 AP5S1Q9NUS5 200 aa10.14□□□□□ -0.79
CPNE1-201ENST00000317677 COX7A2P2O60397 106 aa10.14□□□□□ -0.79
CPNE1-201ENST00000317677 C10orf113Q5VZT2 155 aa10.14□□□□□ -0.79
CPNE1-201ENST00000317677 SHISA2Q6UWI4 295 aa10.14□□□□□ -0.79
CPNE1-201ENST00000317677 C5orf56Q8N8D9 126 aa10.14□□□□□ -0.79
CPNE1-201ENST00000317677 ATP6V0E2Q8NHE4 81 aa10.14□□□□□ -0.79
CPNE1-201ENST00000317677 RPP21Q9H633 154 aaKnown RBP10.14□□□□□ -0.79
CPNE1-201ENST00000317677 ZNF492Q9P255 531 aa10.14□□□□□ -0.79
CPNE1-201ENST00000317677 HAX1O00165 279 aa10.13□□□□□ -0.79
CPNE1-201ENST00000317677 PEX7O00628 323 aa10.13□□□□□ -0.79
CPNE1-201ENST00000317677 NCR2O95944 276 aa10.13□□□□□ -0.79
CPNE1-201ENST00000317677 PYYP10082 97 aa10.13□□□□□ -0.79
CPNE1-201ENST00000317677 RBPMS2Q6ZRY4 209 aaKnown RBP10.13□□□□□ -0.79
CPNE1-201ENST00000317677 GATD1Q8NB37 220 aa10.13□□□□□ -0.79
CPNE1-201ENST00000317677 OR1L4Q8NGR5 311 aa10.13□□□□□ -0.79
CPNE1-201ENST00000317677 TM2D2Q9BX73 214 aa10.13□□□□□ -0.79
CPNE1-201ENST00000317677 PRO0461Q9UI25 63 aa10.13□□□□□ -0.79
CPNE1-201ENST00000317677 KLF12Q9Y4X4 402 aa10.13□□□□□ -0.79
CPNE1-201ENST00000317677 H0Y8G0 127 aa10.12□□□□□ -0.79
CPNE1-201ENST00000317677 ATP6V0E1O15342 81 aa10.12□□□□□ -0.79
CPNE1-201ENST00000317677 ORM2P19652 201 aa10.12□□□□□ -0.79
CPNE1-201ENST00000317677 RASL11BQ9BPW5 248 aa10.12□□□□□ -0.79
CPNE1-201ENST00000317677 ZANQ9Y493 2812 aa10.12□□□□□ -0.79
CPNE1-201ENST00000317677 SPINK8P0C7L1 97 aa10.12□□□□□ -0.79
CPNE1-201ENST00000317677 ETDBQ3ZM63 59 aa10.12□□□□□ -0.79
CPNE1-201ENST00000317677 LINC00305Q7Z4B0 112 aa10.12□□□□□ -0.79
CPNE1-201ENST00000317677 KRTAP1-3Q8IUG1 177 aa10.12□□□□□ -0.79
CPNE1-201ENST00000317677 WFDC11Q8NEX6 87 aa10.12□□□□□ -0.79
CPNE1-201ENST00000317677 RNF183Q96D59 192 aa10.12□□□□□ -0.79
CPNE1-201ENST00000317677 LINC00479Q96M42 142 aa10.12□□□□□ -0.79
CPNE1-201ENST00000317677 MLST8Q9BVC4 326 aa10.12□□□□□ -0.79
CPNE1-201ENST00000317677 CDIP1Q9H305 208 aa10.12□□□□□ -0.79
CPNE1-201ENST00000317677 C19orf71A6NCJ1 209 aa10.11□□□□□ -0.79
CPNE1-201ENST00000317677 ATP5G2Q06055 141 aa10.11□□□□□ -0.79
CPNE1-201ENST00000317677 GAGE13Q4V321 117 aa10.11□□□□□ -0.79
CPNE1-201ENST00000317677 ZNF329Q86UD4 541 aa10.11□□□□□ -0.79
CPNE1-201ENST00000317677 BCL6BQ8N143 479 aaPredicted RBP10.11□□□□□ -0.79
CPNE1-201ENST00000317677 FXYD5Q96DB9 178 aa10.11□□□□□ -0.79
CPNE1-201ENST00000317677 ZNF414Q96IQ9 312 aa10.11□□□□□ -0.79
CPNE1-201ENST00000317677 C18orf15Q96N68 181 aa10.11□□□□□ -0.79
CPNE1-201ENST00000317677 TRBV7-9A0A0J9YWB2 115 aa10.1□□□□□ -0.79
CPNE1-201ENST00000317677 RNF223E7ERA6 249 aa10.1□□□□□ -0.79
CPNE1-201ENST00000317677 CHEK1O14757 476 aa10.1□□□□□ -0.79
CPNE1-201ENST00000317677 ZNF138P52744 262 aa10.1□□□□□ -0.79
CPNE1-201ENST00000317677 SH2D6Q7Z4S9 175 aa10.1□□□□□ -0.79
CPNE1-201ENST00000317677 LINC01356Q8N9X3 169 aa10.1□□□□□ -0.79
CPNE1-201ENST00000317677 VCX2Q9H322 139 aa10.1□□□□□ -0.79
CPNE1-201ENST00000317677 IGLL5B9A064 214 aa10.1□□□□□ -0.79
CPNE1-201ENST00000317677 G3V318 75 aa10.1□□□□□ -0.79
CPNE1-201ENST00000317677 IGHV3-23P01764 117 aa10.1□□□□□ -0.79
CPNE1-201ENST00000317677 APOHP02749 345 aaPredicted RBP10.1□□□□□ -0.79
CPNE1-201ENST00000317677 UBE2L3P68036 154 aaKnown RBP10.1□□□□□ -0.79
CPNE1-201ENST00000317677 ECSCRQ19T08 205 aa10.1□□□□□ -0.79
CPNE1-201ENST00000317677 KLK9Q2XQG4 91 aa10.1□□□□□ -0.79
CPNE1-201ENST00000317677 FAM110DQ8TAY7 271 aaPredicted RBP10.1□□□□□ -0.79
CPNE1-201ENST00000317677 SS18L2Q9UHA2 77 aa10.1□□□□□ -0.79
CPNE1-201ENST00000317677 KLK9Q9UKQ9 250 aa10.1□□□□□ -0.79
CPNE1-201ENST00000317677 MOB4Q9Y3A3 225 aa10.1□□□□□ -0.79
CPNE1-201ENST00000317677 GATA3P23771 443 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms