RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 IBA57Q5T440 356 aaKnown RBP10.16□□□□□ -0.78
PPP1CA-201ENST00000312989 Q6AWC8 147 aa10.16□□□□□ -0.78
PPP1CA-201ENST00000312989 RPL7L1Q6DKI1 246 aaKnown RBP10.16□□□□□ -0.78
PPP1CA-201ENST00000312989 ZNF680Q8NEM1 530 aa10.16□□□□□ -0.78
PPP1CA-201ENST00000312989 OR2T35Q8NGX2 323 aa10.16□□□□□ -0.78
PPP1CA-201ENST00000312989 TMED6Q8WW62 240 aa10.16□□□□□ -0.78
PPP1CA-201ENST00000312989 RAB24Q969Q5 203 aa10.16□□□□□ -0.78
PPP1CA-201ENST00000312989 IGHV1OR15-1A0A075B7D0 117 aa10.15□□□□□ -0.78
PPP1CA-201ENST00000312989 PGPA6NDG6 321 aa10.15□□□□□ -0.78
PPP1CA-201ENST00000312989 SNURFLB1AK76 121 aa10.15□□□□□ -0.78
PPP1CA-201ENST00000312989 CDC34P49427 236 aaPredicted RBP10.15□□□□□ -0.78
PPP1CA-201ENST00000312989 GNG5P63218 68 aa10.15□□□□□ -0.78
PPP1CA-201ENST00000312989 ARL6IP6Q8N6S5 226 aa10.15□□□□□ -0.78
PPP1CA-201ENST00000312989 ZNRF2Q8NHG8 242 aa10.15□□□□□ -0.78
PPP1CA-201ENST00000312989 LENEPQ9Y5L5 61 aa10.15□□□□□ -0.78
PPP1CA-201ENST00000312989 IGLV2-18A0A075B6J9 118 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 TRAV26-1A0A087WT03 109 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 FXYD6-FXYD2A0A087WZ82 144 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 TRAV8-1A0A0A6YYK1 113 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 A0A1W2PPV4 95 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 M0R2N4 97 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 CSN1S1P47710 185 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 SERF2P84101 59 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 RXFP4Q8TDU9 374 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 HYLS1Q96M11 299 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 CYTL1Q9NRR1 136 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 LINC00588Q9Y4M8 146 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 NACAE9PAV3 2078 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 GGTLC3B5MD39 225 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 GCHFRP30047 84 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 GOLT1AQ6ZVE7 132 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 UBE2DNLQ8IWF7 75 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 VSIG2Q96IQ7 327 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 MDFICQ9P1T7 246 aa10.14□□□□□ -0.79
PPP1CA-201ENST00000312989 SMLR1H3BR10 107 aa10.13□□□□□ -0.79
PPP1CA-201ENST00000312989 NUDT3O95989 172 aa10.13□□□□□ -0.79
PPP1CA-201ENST00000312989 IGLV2-11P01706 119 aa10.13□□□□□ -0.79
PPP1CA-201ENST00000312989 FAM3BP58499 235 aaPredicted RBP10.13□□□□□ -0.79
PPP1CA-201ENST00000312989 ST6GAL2Q96JF0 529 aa10.13□□□□□ -0.79
PPP1CA-201ENST00000312989 LRP1BQ9NZR2 4599 aa10.12□□□□□ -0.79
PPP1CA-201ENST00000312989 RYR1P21817 5038 aa10.12□□□□□ -0.79
PPP1CA-201ENST00000312989 H3BNG1 76 aa10.12□□□□□ -0.79
PPP1CA-201ENST00000312989 RGS13O14921 159 aa10.12□□□□□ -0.79
PPP1CA-201ENST00000312989 TDRG1Q3Y452 100 aa10.12□□□□□ -0.79
PPP1CA-201ENST00000312989 MUC21Q5SSG8 566 aa10.12□□□□□ -0.79
PPP1CA-201ENST00000312989 LINC00336Q6ZUF6 198 aa10.12□□□□□ -0.79
PPP1CA-201ENST00000312989 MRPL16Q9NX20 251 aaKnown RBP10.12□□□□□ -0.79
PPP1CA-201ENST00000312989 TRGV1A0A0A0MS02 117 aa10.11□□□□□ -0.79
PPP1CA-201ENST00000312989 A0A0J9YY99 117 aa10.11□□□□□ -0.79
PPP1CA-201ENST00000312989 TCRAP04437 139 aa10.11□□□□□ -0.79
PPP1CA-201ENST00000312989 OR5I1Q13606 314 aa10.11□□□□□ -0.79
PPP1CA-201ENST00000312989 INO80EQ8NBZ0 244 aaPredicted RBP10.11□□□□□ -0.79
PPP1CA-201ENST00000312989 RPH3ALQ9UNE2 315 aa10.11□□□□□ -0.79
PPP1CA-201ENST00000312989 F6UZH7 168 aa10.1□□□□□ -0.79
PPP1CA-201ENST00000312989 MBP02144 154 aa10.1□□□□□ -0.79
PPP1CA-201ENST00000312989 ZNF80P51504 273 aaPredicted RBP10.1□□□□□ -0.79
PPP1CA-201ENST00000312989 OR11H4Q8NGC9 324 aa10.1□□□□□ -0.79
PPP1CA-201ENST00000312989 CMTM2Q8TAZ6 248 aa10.1□□□□□ -0.79
PPP1CA-201ENST00000312989 GNPNAT1Q96EK6 184 aaPredicted RBP10.1□□□□□ -0.79
PPP1CA-201ENST00000312989 SGK494Q96LW2 274 aa10.1□□□□□ -0.79
PPP1CA-201ENST00000312989 KRTAP1-5Q9BYS1 174 aa10.1□□□□□ -0.79
PPP1CA-201ENST00000312989 C11orf21Q9P2W6 132 aa10.1□□□□□ -0.79
PPP1CA-201ENST00000312989 A0A096LPF7 62 aa10.09□□□□□ -0.79
PPP1CA-201ENST00000312989 ARPC5O15511 151 aa10.09□□□□□ -0.79
PPP1CA-201ENST00000312989 ESRGQ1W209 222 aa10.09□□□□□ -0.79
PPP1CA-201ENST00000312989 FAM74A1Q5RGS3 127 aa10.09□□□□□ -0.79
PPP1CA-201ENST00000312989 C5orf17Q8NAS9 161 aa10.09□□□□□ -0.79
PPP1CA-201ENST00000312989 ACTR3CQ9C0K3 210 aaPredicted RBP10.09□□□□□ -0.79
PPP1CA-201ENST00000312989 DNAH5Q8TE73 4624 aa10.08□□□□□ -0.8
PPP1CA-201ENST00000312989 TRGV2A0A075B6R0 118 aa10.08□□□□□ -0.8
PPP1CA-201ENST00000312989 IGHV3-16A0A0C4DH30 117 aa10.08□□□□□ -0.8
PPP1CA-201ENST00000312989 CXorf1O96002 111 aa10.08□□□□□ -0.8
PPP1CA-201ENST00000312989 ZNF415Q09FC8 603 aa10.08□□□□□ -0.8
PPP1CA-201ENST00000312989 FHL2Q14192 279 aa10.08□□□□□ -0.8
PPP1CA-201ENST00000312989 RASL10AQ92737 203 aa10.08□□□□□ -0.8
PPP1CA-201ENST00000312989 ARPC5LQ9BPX5 153 aa10.08□□□□□ -0.8
PPP1CA-201ENST00000312989 UPK3BQ9BT76 320 aa10.08□□□□□ -0.8
PPP1CA-201ENST00000312989 BORCS7-ASMTA0A0B4J1R7 106 aa10.07□□□□□ -0.8
PPP1CA-201ENST00000312989 NBDYA0A0U1RRE5 68 aa10.07□□□□□ -0.8
PPP1CA-201ENST00000312989 CTXND1A0A1B0GTU2 59 aa10.07□□□□□ -0.8
PPP1CA-201ENST00000312989 SERTM2A0A1B0GWG4 89 aa10.07□□□□□ -0.8
PPP1CA-201ENST00000312989 PRSS29PA6NIE9 313 aa10.07□□□□□ -0.8
PPP1CA-201ENST00000312989 GNRH2O43555 120 aa10.07□□□□□ -0.8
PPP1CA-201ENST00000312989 SUMO1P63165 101 aaKnown RBP10.07□□□□□ -0.8
PPP1CA-201ENST00000312989 TMEM183BQ1AE95 376 aa10.07□□□□□ -0.8
PPP1CA-201ENST00000312989 TMEM183AQ8IXX5 376 aa10.07□□□□□ -0.8
PPP1CA-201ENST00000312989 C8orf49Q96NF6 230 aa10.07□□□□□ -0.8
PPP1CA-201ENST00000312989 ATG101Q9BSB4 218 aa10.07□□□□□ -0.8
PPP1CA-201ENST00000312989 TREM1Q9NP99 234 aa10.07□□□□□ -0.8
PPP1CA-201ENST00000312989 TMEM167BQ9NRX6 74 aa10.07□□□□□ -0.8
PPP1CA-201ENST00000312989 EPDR1Q9UM22 224 aa10.07□□□□□ -0.8
PPP1CA-201ENST00000312989 A0A1W2PRE2 83 aa10.06□□□□□ -0.8
PPP1CA-201ENST00000312989 IGHV3-53P01767 116 aa10.06□□□□□ -0.8
PPP1CA-201ENST00000312989 TYMSP04818 313 aa10.06□□□□□ -0.8
PPP1CA-201ENST00000312989 CCL18P55774 89 aa10.06□□□□□ -0.8
PPP1CA-201ENST00000312989 KCNRGQ8N5I3 272 aa10.06□□□□□ -0.8
PPP1CA-201ENST00000312989 LINC00479Q96M42 142 aa10.06□□□□□ -0.8
PPP1CA-201ENST00000312989 PSG8Q9UQ74 426 aa10.06□□□□□ -0.8
PPP1CA-201ENST00000312989 PCLOQ9Y6V0 5065 aa10.06□□□□□ -0.8
PPP1CA-201ENST00000312989 TRGV11A0A075B6L2 103 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms