RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 A0A087X0K7 114 aa7.06□□□□□ -1.28
COL6A5-202ENST00000312481 SS18Q15532 418 aa7.06□□□□□ -1.28
COL6A5-202ENST00000312481 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.06□□□□□ -1.28
COL6A5-202ENST00000312481 J3KRW8 73 aa7.06□□□□□ -1.28
COL6A5-202ENST00000312481 ATOX1O00244 68 aa7.06□□□□□ -1.28
COL6A5-202ENST00000312481 FOXI2Q6ZQN5 318 aa7.06□□□□□ -1.28
COL6A5-202ENST00000312481 ZNF747Q9BV97 191 aa7.06□□□□□ -1.28
COL6A5-202ENST00000312481 COL4A3Q01955 1670 aa7.06□□□□□ -1.28
COL6A5-202ENST00000312481 ZNF462Q96JM2 2506 aa7.06□□□□□ -1.28
COL6A5-202ENST00000312481 ADARB2-AS1A8MUL3 147 aa7.06□□□□□ -1.28
COL6A5-202ENST00000312481 IGLC1P0CG04 106 aa7.06□□□□□ -1.28
COL6A5-202ENST00000312481 SETD2Q9BYW2 2564 aaPredicted RBP7.06□□□□□ -1.28
COL6A5-202ENST00000312481 IGKV3-7A0A075B6H7 116 aa7.06□□□□□ -1.28
COL6A5-202ENST00000312481 P0C879 139 aa7.06□□□□□ -1.28
COL6A5-202ENST00000312481 ATP5EP56381 51 aaPredicted RBP7.06□□□□□ -1.28
COL6A5-202ENST00000312481 SNRPCP09234 159 aaKnown RBP7.06□□□□□ -1.28
COL6A5-202ENST00000312481 SRRM4A7MD48 611 aaKnown RBP7.05□□□□□ -1.28
COL6A5-202ENST00000312481 GNG5P63218 68 aa7.05□□□□□ -1.28
COL6A5-202ENST00000312481 LINC01587Q99440 93 aa7.05□□□□□ -1.28
COL6A5-202ENST00000312481 PGPEP1Q9NXJ5 209 aa7.05□□□□□ -1.28
COL6A5-202ENST00000312481 IGLC7A0M8Q6 106 aa7.05□□□□□ -1.28
COL6A5-202ENST00000312481 CSTL1Q9H114 145 aa7.05□□□□□ -1.28
COL6A5-202ENST00000312481 ELANEP08246 267 aa7.05□□□□□ -1.28
COL6A5-202ENST00000312481 KLK15Q9H2R5 256 aa7.05□□□□□ -1.28
COL6A5-202ENST00000312481 C2orf66Q6UXQ4 117 aa7.05□□□□□ -1.28
COL6A5-202ENST00000312481 ZFHX2Q9C0A1 2572 aaPredicted RBP7.05□□□□□ -1.28
COL6A5-202ENST00000312481 H7C423 109 aa7.04□□□□□ -1.28
COL6A5-202ENST00000312481 IGHV1-69P01742 117 aa7.04□□□□□ -1.28
COL6A5-202ENST00000312481 DAZ2Q13117 558 aaKnown RBP7.04□□□□□ -1.28
COL6A5-202ENST00000312481 DAZ4Q86SG3 579 aaKnown RBP7.04□□□□□ -1.28
COL6A5-202ENST00000312481 DAZ3Q9NR90 486 aaKnown RBP7.04□□□□□ -1.28
COL6A5-202ENST00000312481 IGHV3-72A0A0B4J1Y9 119 aa7.04□□□□□ -1.28
COL6A5-202ENST00000312481 C9JQL5 133 aa7.04□□□□□ -1.28
COL6A5-202ENST00000312481 FCN3O75636 299 aa7.04□□□□□ -1.28
COL6A5-202ENST00000312481 LEAP2Q969E1 77 aa7.04□□□□□ -1.28
COL6A5-202ENST00000312481 CELA3AP09093 270 aa7.04□□□□□ -1.28
COL6A5-202ENST00000312481 C17orf58Q2M2W7 97 aa7.04□□□□□ -1.28
COL6A5-202ENST00000312481 TRAV8-1A0A0A6YYK1 113 aa7.04□□□□□ -1.28
COL6A5-202ENST00000312481 EXOC3-AS1Q8N2X6 119 aa7.04□□□□□ -1.28
COL6A5-202ENST00000312481 ANKRD29Q8N6D5 301 aa7.04□□□□□ -1.28
COL6A5-202ENST00000312481 TRGV2A0A075B6R0 118 aa7.04□□□□□ -1.28
COL6A5-202ENST00000312481 PATE3B3GLJ2 98 aa7.04□□□□□ -1.28
COL6A5-202ENST00000312481 MRPL51Q4U2R6 128 aaKnown RBP7.04□□□□□ -1.28
COL6A5-202ENST00000312481 WFDC3Q8IUB2 231 aa7.04□□□□□ -1.28
COL6A5-202ENST00000312481 TRAV26-1A0A087WT03 109 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 TRAV25A0A0B4J276 109 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 K7EMT4 169 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 EPOPA6NHQ4 379 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 FBXL19-AS1Q494R0 122 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 GAGE12JA6NER3 117 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 GAGE7O76087 117 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 IGKV1-16P04430 117 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 GAGE12FP0CL80 117 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 GAGE12GP0CL81 117 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 GAGE12IP0CL82 117 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 GAGE4Q13068 117 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 ZNF726P1Q15940 193 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 C7orf69Q9H7B7 122 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 SCRT2Q9NQ03 307 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 SDHAF1A6NFY7 115 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 GCSAMLQ5JQS6 135 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 AKIRIN1Q9H9L7 192 aaPredicted RBP7.03□□□□□ -1.28
COL6A5-202ENST00000312481 NOTCH2Q04721 2471 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 IGLL1P15814 213 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 RSPO1Q2MKA7 263 aaPredicted RBP7.03□□□□□ -1.28
COL6A5-202ENST00000312481 RMI2Q96E14 147 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 SPANXB1Q9NS25 103 aaPredicted RBP7.03□□□□□ -1.28
COL6A5-202ENST00000312481 LINC01356Q8N9X3 169 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 IGHV3-21A0A0B4J1V1 117 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 JMJD7-PLA2G4BH0Y9G9 81 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 IGF2BP2-AS1Q96M15 143 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 GAGE5Q13069 117 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 GAGE6Q13070 117 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 JPT2Q9H910 190 aa7.03□□□□□ -1.28
COL6A5-202ENST00000312481 CLUHP3Q96NS8 147 aa7.02□□□□□ -1.29
COL6A5-202ENST00000312481 RCHY1Q96PM5 261 aa7.02□□□□□ -1.29
COL6A5-202ENST00000312481 APELAP0DMC3 54 aa7.02□□□□□ -1.29
COL6A5-202ENST00000312481 TMEM258P61165 79 aa7.02□□□□□ -1.29
COL6A5-202ENST00000312481 C9orf47Q6ZRZ4 202 aa7.02□□□□□ -1.29
COL6A5-202ENST00000312481 ARMS2P0C7Q2 107 aa7.02□□□□□ -1.29
COL6A5-202ENST00000312481 PKD1L2Q7Z442 2459 aa7.02□□□□□ -1.29
COL6A5-202ENST00000312481 CRYGCP07315 174 aa7.02□□□□□ -1.29
COL6A5-202ENST00000312481 FAM27E3Q08E93 113 aa7.02□□□□□ -1.29
COL6A5-202ENST00000312481 MCRIP2Q9BUT9 160 aaKnown RBP7.02□□□□□ -1.29
COL6A5-202ENST00000312481 ACANP16112 2415 aa7.02□□□□□ -1.29
COL6A5-202ENST00000312481 TRBV25-1A0A075B6N4 114 aa7.02□□□□□ -1.29
COL6A5-202ENST00000312481 A0A0G2JRQ6 117 aa7.02□□□□□ -1.29
COL6A5-202ENST00000312481 SPAARA0A1B0GVQ0 90 aa7.02□□□□□ -1.29
COL6A5-202ENST00000312481 FGFBP3Q8TAT2 258 aa7.01□□□□□ -1.29
COL6A5-202ENST00000312481 EDA2RQ9HAV5 297 aa7.01□□□□□ -1.29
COL6A5-202ENST00000312481 IGKV1-39P01597 117 aa7.01□□□□□ -1.29
COL6A5-202ENST00000312481 IGKV1D-39P04432 117 aa7.01□□□□□ -1.29
COL6A5-202ENST00000312481 J3QQQ9 107 aa7.01□□□□□ -1.29
COL6A5-202ENST00000312481 DKK4Q9UBT3 224 aa7.01□□□□□ -1.29
COL6A5-202ENST00000312481 GP9P14770 177 aa7.01□□□□□ -1.29
COL6A5-202ENST00000312481 C8orf86Q6ZUL3 223 aa7.01□□□□□ -1.29
COL6A5-202ENST00000312481 EREGO14944 169 aa7.01□□□□□ -1.29
COL6A5-202ENST00000312481 A0A1B0GUS0 222 aa7.01□□□□□ -1.29
COL6A5-202ENST00000312481 PROK2Q9HC23 129 aa7.01□□□□□ -1.29
COL6A5-202ENST00000312481 A0A1W2PRD5 423 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms