RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CSN1S1P47710 185 aa8.52□□□□□ -1.05
SCFD1-201ENST00000311943 APLNQ9ULZ1 77 aa8.52□□□□□ -1.05
SCFD1-201ENST00000311943 TSPOP30536 169 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 Q6ZTI0 123 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 C9orf62Q8N4C0 152 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 C11orf72Q8NBR9 251 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 SFT2D1Q8WV19 159 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 LINC00476Q8WZB0 136 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 ODF3Q96PU9 254 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 MDFICQ9P1T7 246 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 C11orf21Q9P2W6 132 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 IGHV4-4A0A075B6R2 117 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 GAGE12BA1L429 117 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 FAM74A7A6NL05 159 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 GAGE7O76087 117 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 GAGE12FP0CL80 117 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 GAGE12GP0CL81 117 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 GAGE12IP0CL82 117 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 C2CD4CQ8TF44 421 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 EPDR1Q9UM22 224 aa8.51□□□□□ -1.05
SCFD1-201ENST00000311943 TRAV10A0A0B4J240 114 aa8.5□□□□□ -1.05
SCFD1-201ENST00000311943 GNRH2O43555 120 aa8.5□□□□□ -1.05
SCFD1-201ENST00000311943 SEC11BP0C7V7 166 aa8.5□□□□□ -1.05
SCFD1-201ENST00000311943 DAD1P61803 113 aa8.5□□□□□ -1.05
SCFD1-201ENST00000311943 PRNTQ86SH4 94 aa8.5□□□□□ -1.05
SCFD1-201ENST00000311943 NAGKQ9UJ70 344 aa8.5□□□□□ -1.05
SCFD1-201ENST00000311943 CBY3A6NI87 242 aa8.49□□□□□ -1.05
SCFD1-201ENST00000311943 PAGE4O60829 102 aa8.49□□□□□ -1.05
SCFD1-201ENST00000311943 RXFP4Q8TDU9 374 aa8.49□□□□□ -1.05
SCFD1-201ENST00000311943 TMEM263Q8WUH6 116 aaKnown RBP8.49□□□□□ -1.05
SCFD1-201ENST00000311943 RBAKDNA6NC62 111 aa8.49□□□□□ -1.05
SCFD1-201ENST00000311943 HOXA5P20719 270 aa8.49□□□□□ -1.05
SCFD1-201ENST00000311943 TMEM256Q8N2U0 113 aa8.49□□□□□ -1.05
SCFD1-201ENST00000311943 C5orf17Q8NAS9 161 aa8.49□□□□□ -1.05
SCFD1-201ENST00000311943 C16orf74Q96GX8 76 aa8.49□□□□□ -1.05
SCFD1-201ENST00000311943 TREM1Q9NP99 234 aa8.49□□□□□ -1.05
SCFD1-201ENST00000311943 TMEM167BQ9NRX6 74 aa8.49□□□□□ -1.05
SCFD1-201ENST00000311943 MRPL16Q9NX20 251 aaKnown RBP8.49□□□□□ -1.05
SCFD1-201ENST00000311943 PSG8Q9UQ74 426 aa8.49□□□□□ -1.05
SCFD1-201ENST00000311943 KLK5Q9Y337 293 aaPredicted RBP8.49□□□□□ -1.05
SCFD1-201ENST00000311943 FRAS1Q86XX4 4008 aa8.48□□□□□ -1.05
SCFD1-201ENST00000311943 TMEM189A5PLL7 270 aa8.48□□□□□ -1.05
SCFD1-201ENST00000311943 TPT1P13693 172 aaKnown RBP8.48□□□□□ -1.05
SCFD1-201ENST00000311943 TMEM88Q6PEY1 159 aa8.48□□□□□ -1.05
SCFD1-201ENST00000311943 TIMM8BQ9Y5J9 83 aaPredicted RBP8.48□□□□□ -1.05
SCFD1-201ENST00000311943 RGS13O14921 159 aa8.47□□□□□ -1.05
SCFD1-201ENST00000311943 IFNA7P01567 189 aa8.47□□□□□ -1.05
SCFD1-201ENST00000311943 ANXA2RQ3ZCQ2 193 aa8.47□□□□□ -1.05
SCFD1-201ENST00000311943 CST9LP1Q5W188 147 aa8.47□□□□□ -1.05
SCFD1-201ENST00000311943 NHLRC2Q8NBF2 726 aa8.47□□□□□ -1.05
SCFD1-201ENST00000311943 PYGO2Q9BRQ0 406 aa8.47□□□□□ -1.05
SCFD1-201ENST00000311943 IGHV1OR15-1A0A075B7D0 117 aa8.47□□□□□ -1.05
SCFD1-201ENST00000311943 A0A1W2PRE2 83 aa8.47□□□□□ -1.05
SCFD1-201ENST00000311943 IGHV3-53P01767 116 aa8.47□□□□□ -1.05
SCFD1-201ENST00000311943 TMEM183BQ1AE95 376 aa8.47□□□□□ -1.05
SCFD1-201ENST00000311943 CCDC28AQ8IWP9 274 aa8.47□□□□□ -1.05
SCFD1-201ENST00000311943 TMEM183AQ8IXX5 376 aa8.47□□□□□ -1.05
SCFD1-201ENST00000311943 STOML3Q8TAV4 291 aa8.47□□□□□ -1.05
SCFD1-201ENST00000311943 MBD3L1Q8WWY6 194 aa8.47□□□□□ -1.05
SCFD1-201ENST00000311943 A0A0J9YY99 117 aa8.46□□□□□ -1.05
SCFD1-201ENST00000311943 C11orf94C9JXX5 98 aa8.46□□□□□ -1.05
SCFD1-201ENST00000311943 F5H768 121 aa8.46□□□□□ -1.05
SCFD1-201ENST00000311943 CRIP1P50238 77 aa8.46□□□□□ -1.05
SCFD1-201ENST00000311943 FLI1Q01543 452 aaPredicted RBP8.46□□□□□ -1.05
SCFD1-201ENST00000311943 ZFP69Q49AA0 526 aa8.46□□□□□ -1.05
SCFD1-201ENST00000311943 ALKAL2Q6UX46 152 aa8.46□□□□□ -1.05
SCFD1-201ENST00000311943 EIF4E3Q8N5X7 224 aaKnown RBP8.46□□□□□ -1.05
SCFD1-201ENST00000311943 C20orf144Q9BQM9 153 aa8.46□□□□□ -1.05
SCFD1-201ENST00000311943 SCO2A0A1W2PP80 73 aa8.46□□□□□ -1.06
SCFD1-201ENST00000311943 PEX7O00628 323 aa8.46□□□□□ -1.06
SCFD1-201ENST00000311943 H2AFB1P0C5Y9 115 aa8.46□□□□□ -1.06
SCFD1-201ENST00000311943 Q6AWC8 147 aa8.46□□□□□ -1.06
SCFD1-201ENST00000311943 CYB561D1Q8N8Q1 229 aa8.46□□□□□ -1.06
SCFD1-201ENST00000311943 ATG101Q9BSB4 218 aa8.46□□□□□ -1.06
SCFD1-201ENST00000311943 ARL2-SNX15V9GYD0 113 aa8.46□□□□□ -1.06
SCFD1-201ENST00000311943 TRGV1A0A0A0MS02 117 aa8.45□□□□□ -1.06
SCFD1-201ENST00000311943 LYRM9A8MSI8 78 aa8.45□□□□□ -1.06
SCFD1-201ENST00000311943 GCGP01275 180 aa8.45□□□□□ -1.06
SCFD1-201ENST00000311943 NACAE9PAV3 2078 aa8.45□□□□□ -1.06
SCFD1-201ENST00000311943 DNAH2Q9P225 4427 aa8.45□□□□□ -1.06
SCFD1-201ENST00000311943 SNURFLB1AK76 121 aa8.44□□□□□ -1.06
SCFD1-201ENST00000311943 TYMSP04818 313 aa8.44□□□□□ -1.06
SCFD1-201ENST00000311943 NMBP08949 121 aa8.44□□□□□ -1.06
SCFD1-201ENST00000311943 SFTA3P0C7M3 94 aa8.44□□□□□ -1.06
SCFD1-201ENST00000311943 OR5I1Q13606 314 aa8.44□□□□□ -1.06
SCFD1-201ENST00000311943 ZNF493Q6ZR52 646 aa8.44□□□□□ -1.06
SCFD1-201ENST00000311943 ZNF575Q86XF7 245 aa8.44□□□□□ -1.06
SCFD1-201ENST00000311943 LINC00612Q8N6U2 182 aa8.44□□□□□ -1.06
SCFD1-201ENST00000311943 PCNPQ8WW12 178 aaKnown RBP8.44□□□□□ -1.06
SCFD1-201ENST00000311943 DERL1Q9BUN8 251 aa8.44□□□□□ -1.06
SCFD1-201ENST00000311943 GNG13Q9P2W3 67 aa8.44□□□□□ -1.06
SCFD1-201ENST00000311943 UMAD1C9J7I0 102 aa8.44□□□□□ -1.06
SCFD1-201ENST00000311943 Q86TA4 180 aa8.44□□□□□ -1.06
SCFD1-201ENST00000311943 SULT1A2P50226 295 aa8.43□□□□□ -1.06
SCFD1-201ENST00000311943 TCL1AP56279 114 aa8.43□□□□□ -1.06
SCFD1-201ENST00000311943 SLC51BQ86UW2 128 aa8.43□□□□□ -1.06
SCFD1-201ENST00000311943 ZC2HC1AQ96GY0 325 aa8.43□□□□□ -1.06
SCFD1-201ENST00000311943 TRAV26-1A0A087WT03 109 aa8.42□□□□□ -1.06
SCFD1-201ENST00000311943 IGKV3D-20A0A0C4DH25 116 aa8.42□□□□□ -1.06
SCFD1-201ENST00000311943 DAZ2Q13117 558 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms