RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 COL25A1Q9BXS0 654 aaPredicted RBP19.44■□□□□ 0.7
HOXB3-201ENST00000311626 C21orf62-AS1Q17RA5 79 aa19.43■□□□□ 0.7
HOXB3-201ENST00000311626 METTL26Q96S19 204 aa19.43■□□□□ 0.7
HOXB3-201ENST00000311626 NAA38Q9BRA0 125 aaKnown RBP19.43■□□□□ 0.7
HOXB3-201ENST00000311626 TRBV12-3P01733 135 aa19.43■□□□□ 0.7
HOXB3-201ENST00000311626 LINC01559Q495D7 138 aa19.43■□□□□ 0.7
HOXB3-201ENST00000311626 SPG11Q96JI7 2443 aa19.43■□□□□ 0.7
HOXB3-201ENST00000311626 TRAV8-6A0A0B4J262 113 aa19.42■□□□□ 0.7
HOXB3-201ENST00000311626 FBLL1A6NHQ2 334 aaKnown RBP19.42■□□□□ 0.7
HOXB3-201ENST00000311626 TMEM97Q5BJF2 176 aa19.42■□□□□ 0.7
HOXB3-201ENST00000311626 TTTY13Q9BZ97 58 aa19.42■□□□□ 0.7
HOXB3-201ENST00000311626 UFC1Q9Y3C8 167 aa19.42■□□□□ 0.7
HOXB3-201ENST00000311626 ATP5G2Q06055 141 aa19.41■□□□□ 0.7
HOXB3-201ENST00000311626 TMEM78Q5T7P6 136 aa19.41■□□□□ 0.7
HOXB3-201ENST00000311626 SLC50A1Q9BRV3 221 aa19.4■□□□□ 0.7
HOXB3-201ENST00000311626 LY6EQ16553 131 aa19.4■□□□□ 0.7
HOXB3-201ENST00000311626 PRR9Q5T870 116 aa19.4■□□□□ 0.7
HOXB3-201ENST00000311626 C20orf173Q96LM9 149 aa19.4■□□□□ 0.7
HOXB3-201ENST00000311626 IGKV3-7A0A075B6H7 116 aa19.39■□□□□ 0.69
HOXB3-201ENST00000311626 CD5LO43866 347 aa19.39■□□□□ 0.69
HOXB3-201ENST00000311626 UNQ9165/PRO28630Q6UXU0 137 aa19.39■□□□□ 0.69
HOXB3-201ENST00000311626 C16orf92Q96LL3 132 aa19.39■□□□□ 0.69
HOXB3-201ENST00000311626 CNFNQ9BYD5 112 aa19.39■□□□□ 0.69
HOXB3-201ENST00000311626 S100A7P31151 101 aa19.38■□□□□ 0.69
HOXB3-201ENST00000311626 TM4SF20Q53R12 229 aa19.38■□□□□ 0.69
HOXB3-201ENST00000311626 LCNL1Q6ZST4 164 aa19.38■□□□□ 0.69
HOXB3-201ENST00000311626 C7orf71A4D174 169 aa19.38■□□□□ 0.69
HOXB3-201ENST00000311626 SMAD7O15105 426 aaKnown RBP19.38■□□□□ 0.69
HOXB3-201ENST00000311626 TMEM158Q8WZ71 300 aa19.38■□□□□ 0.69
HOXB3-201ENST00000311626 TRAV41A0A0B4J266 112 aa19.38■□□□□ 0.69
HOXB3-201ENST00000311626 IGHV3-11P01762 117 aa19.38■□□□□ 0.69
HOXB3-201ENST00000311626 PRSS1P07477 247 aa19.38■□□□□ 0.69
HOXB3-201ENST00000311626 ITLN2Q8WWU7 325 aaPredicted RBP19.38■□□□□ 0.69
HOXB3-201ENST00000311626 TRBV7-1A0A0A6YYK4 115 aa19.37■□□□□ 0.69
HOXB3-201ENST00000311626 IGHV4-39P01824 125 aa19.37■□□□□ 0.69
HOXB3-201ENST00000311626 RAB9AP51151 201 aa19.37■□□□□ 0.69
HOXB3-201ENST00000311626 SRSF2Q01130 221 aaKnown RBP19.37■□□□□ 0.69
HOXB3-201ENST00000311626 IGHV7-4-1A0A0J9YVY3 117 aa19.37■□□□□ 0.69
HOXB3-201ENST00000311626 SFTPCP11686 197 aa19.37■□□□□ 0.69
HOXB3-201ENST00000311626 BOD1L2Q8IYS8 172 aa19.37■□□□□ 0.69
HOXB3-201ENST00000311626 TRAV40A0A0B4J280 105 aa19.36■□□□□ 0.69
HOXB3-201ENST00000311626 RBAKDNA6NC62 111 aa19.36■□□□□ 0.69
HOXB3-201ENST00000311626 GNLYP22749 145 aa19.36■□□□□ 0.69
HOXB3-201ENST00000311626 IGKV2D-26A0A0A0MRZ7 120 aa19.36■□□□□ 0.69
HOXB3-201ENST00000311626 H3BVH4 76 aa19.36■□□□□ 0.69
HOXB3-201ENST00000311626 PIFOQ8TCI5 191 aa19.36■□□□□ 0.69
HOXB3-201ENST00000311626 CELSR2Q9HCU4 2923 aa19.35■□□□□ 0.69
HOXB3-201ENST00000311626 FCER1GP30273 86 aa19.35■□□□□ 0.69
HOXB3-201ENST00000311626 RNF151Q2KHN1 245 aa19.35■□□□□ 0.69
HOXB3-201ENST00000311626 CBY1Q9Y3M2 126 aa19.35■□□□□ 0.69
HOXB3-201ENST00000311626 A1L4Q6 167 aa19.34■□□□□ 0.69
HOXB3-201ENST00000311626 PPBPP02775 128 aa19.34■□□□□ 0.69
HOXB3-201ENST00000311626 RAB37Q96AX2 223 aa19.34■□□□□ 0.69
HOXB3-201ENST00000311626 FOXC2Q99958 501 aa19.34■□□□□ 0.69
HOXB3-201ENST00000311626 ARL3P36405 182 aa19.34■□□□□ 0.69
HOXB3-201ENST00000311626 SPANXN1Q5VSR9 72 aa19.34■□□□□ 0.69
HOXB3-201ENST00000311626 OR1N2Q8NGR9 330 aa19.34■□□□□ 0.69
HOXB3-201ENST00000311626 OR2K2Q8NGT1 345 aa19.34■□□□□ 0.69
HOXB3-201ENST00000311626 RBX1P62877 108 aa19.33■□□□□ 0.69
HOXB3-201ENST00000311626 GLMPQ8WWB7 406 aa19.33■□□□□ 0.69
HOXB3-201ENST00000311626 MOB4Q9Y3A3 225 aa19.33■□□□□ 0.68
HOXB3-201ENST00000311626 U3KQE9 123 aa19.33■□□□□ 0.68
HOXB3-201ENST00000311626 K7EP13 123 aa19.32■□□□□ 0.68
HOXB3-201ENST00000311626 ODF1Q14990 250 aa19.32■□□□□ 0.68
HOXB3-201ENST00000311626 PPP1R14DQ9NXH3 145 aa19.32■□□□□ 0.68
HOXB3-201ENST00000311626 IGHV4-38-2P0DP08 117 aa19.32■□□□□ 0.68
HOXB3-201ENST00000311626 RPL11P62913 178 aaKnown RBP19.32■□□□□ 0.68
HOXB3-201ENST00000311626 KLK9Q2XQG4 91 aa19.32■□□□□ 0.68
HOXB3-201ENST00000311626 KLK9Q9UKQ9 250 aa19.32■□□□□ 0.68
HOXB3-201ENST00000311626 IGHV4-61A0A0C4DH41 118 aa19.31■□□□□ 0.68
HOXB3-201ENST00000311626 KIR3DS1Q14943 382 aa19.31■□□□□ 0.68
HOXB3-201ENST00000311626 Q6ZS46 218 aa19.31■□□□□ 0.68
HOXB3-201ENST00000311626 NXT2Q9NPJ8 142 aaKnown RBP19.31■□□□□ 0.68
HOXB3-201ENST00000311626 F6UB75 175 aa19.31■□□□□ 0.68
HOXB3-201ENST00000311626 GTSCR1Q86UQ5 136 aa19.31■□□□□ 0.68
HOXB3-201ENST00000311626 KLK15Q9H2R5 256 aa19.31■□□□□ 0.68
HOXB3-201ENST00000311626 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.31■□□□□ 0.68
HOXB3-201ENST00000311626 C9orf47Q6ZRZ4 202 aa19.3■□□□□ 0.68
HOXB3-201ENST00000311626 DPF1Q92782 380 aa19.3■□□□□ 0.68
HOXB3-201ENST00000311626 IGLV2-18A0A075B6J9 118 aa19.3■□□□□ 0.68
HOXB3-201ENST00000311626 ADAMTSL5Q6ZMM2 481 aa19.29■□□□□ 0.68
HOXB3-201ENST00000311626 GPHB5Q86YW7 130 aa19.29■□□□□ 0.68
HOXB3-201ENST00000311626 NRACQ8N912 160 aa19.29■□□□□ 0.68
HOXB3-201ENST00000311626 JMJD8Q96S16 334 aa19.29■□□□□ 0.68
HOXB3-201ENST00000311626 IGHV1-69DA0A0B4J2H0 117 aa19.29■□□□□ 0.68
HOXB3-201ENST00000311626 IGHV1-69P01742 117 aa19.29■□□□□ 0.68
HOXB3-201ENST00000311626 Q8N8P6 123 aa19.29■□□□□ 0.68
HOXB3-201ENST00000311626 M0R381 172 aa19.28■□□□□ 0.68
HOXB3-201ENST00000311626 SMIM17P0DL12 118 aa19.28■□□□□ 0.68
HOXB3-201ENST00000311626 SRD5A1P18405 259 aa19.28■□□□□ 0.68
HOXB3-201ENST00000311626 HHLA3Q9XRX5 114 aa19.28■□□□□ 0.68
HOXB3-201ENST00000311626 CRYBG3Q68DQ2 2970 aa19.28■□□□□ 0.68
HOXB3-201ENST00000311626 TMEM160Q9NX00 188 aa19.28■□□□□ 0.68
HOXB3-201ENST00000311626 PEF1Q9UBV8 284 aaKnown RBP19.28■□□□□ 0.68
HOXB3-201ENST00000311626 H3BUT2 72 aa19.27■□□□□ 0.68
HOXB3-201ENST00000311626 BLCAPP62952 87 aa19.27■□□□□ 0.68
HOXB3-201ENST00000311626 K7EMI3 77 aa19.27■□□□□ 0.68
HOXB3-201ENST00000311626 SEC11AP67812 179 aa19.27■□□□□ 0.68
HOXB3-201ENST00000311626 SMIM15Q7Z3B0 74 aa19.27■□□□□ 0.68
HOXB3-201ENST00000311626 EDN2P20800 178 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms