RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 DTX2Q86UW9 622 aa11.54□□□□□ -0.56
RUNX3-201ENST00000308873 DEFB1P60022 68 aa11.54□□□□□ -0.56
RUNX3-201ENST00000308873 WFDC12Q8WWY7 111 aa11.54□□□□□ -0.56
RUNX3-201ENST00000308873 CFHR4Q92496 578 aa11.54□□□□□ -0.56
RUNX3-201ENST00000308873 TEX48A0A1B0GUV7 120 aa11.53□□□□□ -0.56
RUNX3-201ENST00000308873 AGRNO00468 2067 aa11.53□□□□□ -0.56
RUNX3-201ENST00000308873 TNFRSF13BO14836 293 aaPredicted RBP11.53□□□□□ -0.56
RUNX3-201ENST00000308873 DPM2O94777 84 aa11.53□□□□□ -0.56
RUNX3-201ENST00000308873 TGFAP01135 160 aa11.53□□□□□ -0.56
RUNX3-201ENST00000308873 EMP1P54849 157 aa11.53□□□□□ -0.56
RUNX3-201ENST00000308873 RPS20P60866 119 aaKnown RBP11.53□□□□□ -0.56
RUNX3-201ENST00000308873 CTSGP08311 255 aa11.52□□□□□ -0.57
RUNX3-201ENST00000308873 SCGB1D4Q6XE38 83 aa11.52□□□□□ -0.57
RUNX3-201ENST00000308873 ZNF502Q8TBZ5 544 aa11.52□□□□□ -0.57
RUNX3-201ENST00000308873 C16orf92Q96LL3 132 aa11.52□□□□□ -0.57
RUNX3-201ENST00000308873 TRBV25-1A0A075B6N4 114 aa11.51□□□□□ -0.57
RUNX3-201ENST00000308873 H3BMG7 143 aa11.51□□□□□ -0.57
RUNX3-201ENST00000308873 PDE6HQ13956 83 aa11.51□□□□□ -0.57
RUNX3-201ENST00000308873 VMO1Q7Z5L0 202 aa11.51□□□□□ -0.57
RUNX3-201ENST00000308873 SPTBN4Q9H254 2564 aa11.51□□□□□ -0.57
RUNX3-201ENST00000308873 WI2-2373I1.2A0A1W2PRP0 233 aa11.51□□□□□ -0.57
RUNX3-201ENST00000308873 ZNF562Q6V9R5 426 aa11.51□□□□□ -0.57
RUNX3-201ENST00000308873 ZNF493Q6ZR52 646 aa11.51□□□□□ -0.57
RUNX3-201ENST00000308873 TMEM219Q86XT9 240 aa11.51□□□□□ -0.57
RUNX3-201ENST00000308873 CYSLTR1Q9Y271 337 aa11.51□□□□□ -0.57
RUNX3-201ENST00000308873 IGLV11-55A0A075B6I3 123 aa11.51□□□□□ -0.57
RUNX3-201ENST00000308873 ETDBQ3ZM63 59 aa11.51□□□□□ -0.57
RUNX3-201ENST00000308873 ADAMTSL5Q6ZMM2 481 aa11.51□□□□□ -0.57
RUNX3-201ENST00000308873 SH2D6Q7Z4S9 175 aa11.51□□□□□ -0.57
RUNX3-201ENST00000308873 NXT2Q9NPJ8 142 aaKnown RBP11.5□□□□□ -0.57
RUNX3-201ENST00000308873 SMAD5-AS1Q9Y6J3 95 aa11.5□□□□□ -0.57
RUNX3-201ENST00000308873 TMEM238C9JI98 176 aa11.5□□□□□ -0.57
RUNX3-201ENST00000308873 MRPS12O15235 138 aaKnown RBP11.5□□□□□ -0.57
RUNX3-201ENST00000308873 ODF1Q14990 250 aa11.5□□□□□ -0.57
RUNX3-201ENST00000308873 Q8NA96 180 aa11.5□□□□□ -0.57
RUNX3-201ENST00000308873 ZNF479Q96JC4 524 aa11.5□□□□□ -0.57
RUNX3-201ENST00000308873 LOC107984156A0A0G2JMH3 177 aa11.49□□□□□ -0.57
RUNX3-201ENST00000308873 NEGR1Q7Z3B1 354 aa11.49□□□□□ -0.57
RUNX3-201ENST00000308873 ARL17AQ8IVW1 177 aa11.49□□□□□ -0.57
RUNX3-201ENST00000308873 NPFFR1Q9GZQ6 430 aa11.49□□□□□ -0.57
RUNX3-201ENST00000308873 UBTD1Q9HAC8 227 aa11.49□□□□□ -0.57
RUNX3-201ENST00000308873 HOXB4P17483 251 aaPredicted RBP11.49□□□□□ -0.57
RUNX3-201ENST00000308873 SRSF9Q13242 221 aaKnown RBP eCLIP11.49□□□□□ -0.57
RUNX3-201ENST00000308873 WFDC2Q14508 124 aa11.49□□□□□ -0.57
RUNX3-201ENST00000308873 VKORC1Q9BQB6 163 aa11.49□□□□□ -0.57
RUNX3-201ENST00000308873 AGPAT4-IT1Q9H0P7 198 aa11.49□□□□□ -0.57
RUNX3-201ENST00000308873 SRD5A1P18405 259 aa11.48□□□□□ -0.57
RUNX3-201ENST00000308873 C16orf54Q6UWD8 224 aa11.48□□□□□ -0.57
RUNX3-201ENST00000308873 LINC01548A6NM66 108 aa11.48□□□□□ -0.57
RUNX3-201ENST00000308873 OVOL3O00110 214 aa11.48□□□□□ -0.57
RUNX3-201ENST00000308873 ATP6V0E1O15342 81 aa11.48□□□□□ -0.57
RUNX3-201ENST00000308873 IGHV3-11P01762 117 aa11.48□□□□□ -0.57
RUNX3-201ENST00000308873 CCDC144NLQ6NUI1 221 aa11.48□□□□□ -0.57
RUNX3-201ENST00000308873 TTC9CQ8N5M4 171 aa11.48□□□□□ -0.57
RUNX3-201ENST00000308873 OR5A1Q8NGJ0 315 aa11.48□□□□□ -0.57
RUNX3-201ENST00000308873 RNF185Q96GF1 192 aa11.48□□□□□ -0.57
RUNX3-201ENST00000308873 SAMD13Q5VXD3 122 aa11.47□□□□□ -0.57
RUNX3-201ENST00000308873 C14orf178Q8N769 122 aaPredicted RBP11.47□□□□□ -0.57
RUNX3-201ENST00000308873 SCGB3A1Q96QR1 104 aa11.47□□□□□ -0.57
RUNX3-201ENST00000308873 RNF5Q99942 180 aa11.47□□□□□ -0.57
RUNX3-201ENST00000308873 OR11H12B2RN74 326 aa11.47□□□□□ -0.57
RUNX3-201ENST00000308873 F5H697 171 aa11.47□□□□□ -0.57
RUNX3-201ENST00000308873 LAGE3Q14657 143 aa11.47□□□□□ -0.57
RUNX3-201ENST00000308873 MAPKAPK5-AS1Q8N8E1 139 aa11.47□□□□□ -0.57
RUNX3-201ENST00000308873 OR11H1Q8NG94 326 aa11.47□□□□□ -0.57
RUNX3-201ENST00000308873 OR11H2Q8NH07 326 aa11.47□□□□□ -0.57
RUNX3-201ENST00000308873 METTL26Q96S19 204 aa11.47□□□□□ -0.57
RUNX3-201ENST00000308873 C2CD3Q4AC94 2353 aa11.47□□□□□ -0.57
RUNX3-201ENST00000308873 G3V4G9 280 aa11.46□□□□□ -0.57
RUNX3-201ENST00000308873 APOMO95445 188 aa11.46□□□□□ -0.57
RUNX3-201ENST00000308873 IGKV3D-20A0A0C4DH25 116 aa11.46□□□□□ -0.57
RUNX3-201ENST00000308873 F8W735 103 aaPredicted RBP11.46□□□□□ -0.57
RUNX3-201ENST00000308873 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.46□□□□□ -0.57
RUNX3-201ENST00000308873 IGF1P05019 195 aa11.46□□□□□ -0.57
RUNX3-201ENST00000308873 UFSP1Q6NVU6 142 aa11.46□□□□□ -0.57
RUNX3-201ENST00000308873 C11orf21Q9P2W6 132 aa11.46□□□□□ -0.57
RUNX3-201ENST00000308873 TSSC4Q9Y5U2 329 aaPredicted RBP11.46□□□□□ -0.57
RUNX3-201ENST00000308873 ZNF418Q8TF45 676 aaPredicted RBP11.45□□□□□ -0.58
RUNX3-201ENST00000308873 PHLDA3Q9Y5J5 127 aa11.45□□□□□ -0.58
RUNX3-201ENST00000308873 IGHV7-81A0A0B4J1V7 117 aa11.45□□□□□ -0.58
RUNX3-201ENST00000308873 A0A1B0GWB2 263 aa11.45□□□□□ -0.58
RUNX3-201ENST00000308873 LY6LH3BQJ8 138 aa11.45□□□□□ -0.58
RUNX3-201ENST00000308873 ATP5LO75964 103 aa11.45□□□□□ -0.58
RUNX3-201ENST00000308873 IGLC6P0CF74 106 aa11.45□□□□□ -0.58
RUNX3-201ENST00000308873 PRTN3P24158 256 aa11.45□□□□□ -0.58
RUNX3-201ENST00000308873 LY6EQ16553 131 aa11.44□□□□□ -0.58
RUNX3-201ENST00000308873 CD300EQ496F6 205 aaPredicted RBP11.44□□□□□ -0.58
RUNX3-201ENST00000308873 U3KQK5 164 aa11.44□□□□□ -0.58
RUNX3-201ENST00000308873 TRBV6-1A0A0K0K1D8 114 aa11.44□□□□□ -0.58
RUNX3-201ENST00000308873 IGKV3-20P01619 116 aa11.44□□□□□ -0.58
RUNX3-201ENST00000308873 Q5PR19 223 aa11.44□□□□□ -0.58
RUNX3-201ENST00000308873 F6UB75 175 aa11.44□□□□□ -0.58
RUNX3-201ENST00000308873 CEND1Q8N111 149 aa11.44□□□□□ -0.58
RUNX3-201ENST00000308873 J3QR89 54 aa11.43□□□□□ -0.58
RUNX3-201ENST00000308873 CDSNQ15517 529 aa11.43□□□□□ -0.58
RUNX3-201ENST00000308873 MRPL16Q9NX20 251 aaKnown RBP11.43□□□□□ -0.58
RUNX3-201ENST00000308873 HHLA3Q9XRX5 114 aa11.43□□□□□ -0.58
RUNX3-201ENST00000308873 HIVEP3Q5T1R4 2406 aa11.43□□□□□ -0.58
RUNX3-201ENST00000308873 H7C2G1 150 aa11.43□□□□□ -0.58
RUNX3-201ENST00000308873 RPL39LQ96EH5 51 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms