RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 HSD17B11Q8NBQ5 300 aa13.78□□□□□ -0.2
PDZRN3-202ENST00000308537 ZNF680Q8NEM1 530 aa13.78□□□□□ -0.2
PDZRN3-202ENST00000308537 GNPNAT1Q96EK6 184 aaPredicted RBP13.78□□□□□ -0.2
PDZRN3-202ENST00000308537 G3V3Q6 166 aa13.77□□□□□ -0.21
PDZRN3-202ENST00000308537 SPINK4O60575 86 aa13.77□□□□□ -0.21
PDZRN3-202ENST00000308537 IBA57Q5T440 356 aaKnown RBP13.77□□□□□ -0.21
PDZRN3-202ENST00000308537 OR2G3Q8NGZ4 309 aa13.77□□□□□ -0.21
PDZRN3-202ENST00000308537 IGHV1OR15-1A0A075B7D0 117 aa13.76□□□□□ -0.21
PDZRN3-202ENST00000308537 RNF222A6NCQ9 220 aa13.76□□□□□ -0.21
PDZRN3-202ENST00000308537 OR5I1Q13606 314 aa13.76□□□□□ -0.21
PDZRN3-202ENST00000308537 PQLC2Q6ZP29 291 aa13.76□□□□□ -0.21
PDZRN3-202ENST00000308537 OR10G4Q8NGN3 311 aa13.76□□□□□ -0.21
PDZRN3-202ENST00000308537 OR10G9Q8NGN4 311 aa13.76□□□□□ -0.21
PDZRN3-202ENST00000308537 OR10G7Q8NGN6 311 aa13.76□□□□□ -0.21
PDZRN3-202ENST00000308537 RXFP4Q8TDU9 374 aa13.76□□□□□ -0.21
PDZRN3-202ENST00000308537 VSIG2Q96IQ7 327 aa13.76□□□□□ -0.21
PDZRN3-202ENST00000308537 OTORQ9NRC9 128 aa13.76□□□□□ -0.21
PDZRN3-202ENST00000308537 PRSS29PA6NIE9 313 aa13.75□□□□□ -0.21
PDZRN3-202ENST00000308537 ARPC5O15511 151 aa13.75□□□□□ -0.21
PDZRN3-202ENST00000308537 ATP6V0CP27449 155 aa13.75□□□□□ -0.21
PDZRN3-202ENST00000308537 CSN1S1P47710 185 aa13.75□□□□□ -0.21
PDZRN3-202ENST00000308537 Q6AWC8 147 aa13.75□□□□□ -0.21
PDZRN3-202ENST00000308537 A0A0J9YY99 117 aa13.74□□□□□ -0.21
PDZRN3-202ENST00000308537 H3BNG1 76 aa13.74□□□□□ -0.21
PDZRN3-202ENST00000308537 HMGB3O15347 200 aaKnown RBP13.74□□□□□ -0.21
PDZRN3-202ENST00000308537 STAG3L2P0CL84 134 aa13.74□□□□□ -0.21
PDZRN3-202ENST00000308537 STAG3L3P0CL85 134 aa13.74□□□□□ -0.21
PDZRN3-202ENST00000308537 SUN5Q8TC36 379 aa13.74□□□□□ -0.21
PDZRN3-202ENST00000308537 TMED6Q8WW62 240 aa13.74□□□□□ -0.21
PDZRN3-202ENST00000308537 TVP23CQ96ET8 276 aa13.74□□□□□ -0.21
PDZRN3-202ENST00000308537 LENEPQ9Y5L5 61 aa13.74□□□□□ -0.21
PDZRN3-202ENST00000308537 PGPA6NDG6 321 aa13.73□□□□□ -0.21
PDZRN3-202ENST00000308537 FAM74A1Q5RGS3 127 aa13.73□□□□□ -0.21
PDZRN3-202ENST00000308537 ATG101Q9BSB4 218 aa13.73□□□□□ -0.21
PDZRN3-202ENST00000308537 TRGV1A0A0A0MS02 117 aa13.72□□□□□ -0.21
PDZRN3-202ENST00000308537 NBDYA0A0U1RRE5 68 aa13.72□□□□□ -0.21
PDZRN3-202ENST00000308537 RGS13O14921 159 aa13.72□□□□□ -0.21
PDZRN3-202ENST00000308537 ARL14EPLP0DKL9 152 aa13.72□□□□□ -0.21
PDZRN3-202ENST00000308537 CDC34P49427 236 aaPredicted RBP13.72□□□□□ -0.21
PDZRN3-202ENST00000308537 RPL7L1Q6DKI1 246 aaKnown RBP13.72□□□□□ -0.21
PDZRN3-202ENST00000308537 SSX7Q7RTT5 188 aa13.72□□□□□ -0.21
PDZRN3-202ENST00000308537 ARL6IP6Q8N6S5 226 aa13.72□□□□□ -0.21
PDZRN3-202ENST00000308537 HYLS1Q96M11 299 aa13.72□□□□□ -0.21
PDZRN3-202ENST00000308537 SH3BGRL3Q9H299 93 aa13.72□□□□□ -0.21
PDZRN3-202ENST00000308537 LRP1BQ9NZR2 4599 aa13.71□□□□□ -0.21
PDZRN3-202ENST00000308537 TRAV8-1A0A0A6YYK1 113 aa13.71□□□□□ -0.21
PDZRN3-202ENST00000308537 HMSDA8MTL9 139 aa13.71□□□□□ -0.21
PDZRN3-202ENST00000308537 CCL18P55774 89 aa13.71□□□□□ -0.21
PDZRN3-202ENST00000308537 ZNF345Q14585 488 aa13.71□□□□□ -0.21
PDZRN3-202ENST00000308537 ESRGQ1W209 222 aa13.71□□□□□ -0.21
PDZRN3-202ENST00000308537 RAB24Q969Q5 203 aa13.71□□□□□ -0.21
PDZRN3-202ENST00000308537 KRTAP1-5Q9BYS1 174 aa13.71□□□□□ -0.21
PDZRN3-202ENST00000308537 ACTR3CQ9C0K3 210 aaPredicted RBP13.71□□□□□ -0.21
PDZRN3-202ENST00000308537 MDFICQ9P1T7 246 aa13.71□□□□□ -0.21
PDZRN3-202ENST00000308537 A0A096LPF7 62 aa13.7□□□□□ -0.22
PDZRN3-202ENST00000308537 GNG5P63218 68 aa13.7□□□□□ -0.22
PDZRN3-202ENST00000308537 MUC21Q5SSG8 566 aa13.7□□□□□ -0.22
PDZRN3-202ENST00000308537 ST6GAL2Q96JF0 529 aa13.7□□□□□ -0.22
PDZRN3-202ENST00000308537 UPK3BQ9BT76 320 aa13.7□□□□□ -0.22
PDZRN3-202ENST00000308537 MRPL16Q9NX20 251 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-202ENST00000308537 TRGV2A0A075B6R0 118 aa13.69□□□□□ -0.22
PDZRN3-202ENST00000308537 A0A0D9SG52 128 aa13.69□□□□□ -0.22
PDZRN3-202ENST00000308537 TDRG1Q3Y452 100 aa13.69□□□□□ -0.22
PDZRN3-202ENST00000308537 C1orf134Q5TEV5 83 aa13.69□□□□□ -0.22
PDZRN3-202ENST00000308537 GOLT1AQ6ZVE7 132 aa13.69□□□□□ -0.22
PDZRN3-202ENST00000308537 CMTM2Q8TAZ6 248 aa13.69□□□□□ -0.22
PDZRN3-202ENST00000308537 ARPC5LQ9BPX5 153 aa13.69□□□□□ -0.22
PDZRN3-202ENST00000308537 SMLR1H3BR10 107 aa13.68□□□□□ -0.22
PDZRN3-202ENST00000308537 AKR1C8PQ5T2L2 129 aa13.68□□□□□ -0.22
PDZRN3-202ENST00000308537 KCNRGQ8N5I3 272 aa13.68□□□□□ -0.22
PDZRN3-202ENST00000308537 GCHFRP30047 84 aa13.67□□□□□ -0.22
PDZRN3-202ENST00000308537 EIF5AP63241 154 aaKnown RBP13.67□□□□□ -0.22
PDZRN3-202ENST00000308537 ZNF726P1Q15940 193 aa13.67□□□□□ -0.22
PDZRN3-202ENST00000308537 RPH3ALQ9UNE2 315 aa13.67□□□□□ -0.22
PDZRN3-202ENST00000308537 KANTRA0A1W2PQU2 76 aa13.66□□□□□ -0.22
PDZRN3-202ENST00000308537 GGTLC3B5MD39 225 aa13.66□□□□□ -0.22
PDZRN3-202ENST00000308537 CXorf1O96002 111 aa13.66□□□□□ -0.22
PDZRN3-202ENST00000308537 IGLV2-11P01706 119 aa13.66□□□□□ -0.22
PDZRN3-202ENST00000308537 ZNF415Q09FC8 603 aa13.66□□□□□ -0.22
PDZRN3-202ENST00000308537 FHL2Q14192 279 aa13.66□□□□□ -0.22
PDZRN3-202ENST00000308537 Q9H8V8 135 aa13.66□□□□□ -0.22
PDZRN3-202ENST00000308537 TMEM167BQ9NRX6 74 aa13.66□□□□□ -0.22
PDZRN3-202ENST00000308537 MRPS16Q9Y3D3 137 aaKnown RBP13.66□□□□□ -0.22
PDZRN3-202ENST00000308537 DNAH5Q8TE73 4624 aa13.65□□□□□ -0.22
PDZRN3-202ENST00000308537 IGHV3-53P01767 116 aa13.65□□□□□ -0.22
PDZRN3-202ENST00000308537 RASL10AQ92737 203 aa13.65□□□□□ -0.22
PDZRN3-202ENST00000308537 CTXND1A0A1B0GTU2 59 aa13.64□□□□□ -0.23
PDZRN3-202ENST00000308537 F6UZH7 168 aa13.64□□□□□ -0.23
PDZRN3-202ENST00000308537 TCRAP04437 139 aa13.64□□□□□ -0.23
PDZRN3-202ENST00000308537 TNP2Q05952 138 aa13.64□□□□□ -0.23
PDZRN3-202ENST00000308537 TMEM183BQ1AE95 376 aa13.64□□□□□ -0.23
PDZRN3-202ENST00000308537 Q6ZNX1 250 aa13.64□□□□□ -0.23
PDZRN3-202ENST00000308537 TMEM183AQ8IXX5 376 aa13.64□□□□□ -0.23
PDZRN3-202ENST00000308537 C5orf17Q8NAS9 161 aa13.64□□□□□ -0.23
PDZRN3-202ENST00000308537 SGK494Q96LW2 274 aa13.64□□□□□ -0.23
PDZRN3-202ENST00000308537 CYTL1Q9NRR1 136 aa13.64□□□□□ -0.23
PDZRN3-202ENST00000308537 C11orf21Q9P2W6 132 aa13.64□□□□□ -0.23
PDZRN3-202ENST00000308537 HSPG2P98160 4391 aa13.63□□□□□ -0.23
PDZRN3-202ENST00000308537 IGHV3-16A0A0C4DH30 117 aa13.63□□□□□ -0.23
PDZRN3-202ENST00000308537 GNRH2O43555 120 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms