RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 RPS10P46783 165 aaKnown RBP5.19□□□□□ -1.58
PTCD2-201ENST00000308077 ZNF138P52744 262 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 SAPCD1Q5SSQ6 148 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 TMEM78Q5T7P6 136 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 PYGO2Q9BRQ0 406 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 PPP1R14DQ9NXH3 145 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 IL36BQ9NZH7 164 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 TRAV2A0A0B4J234 112 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 A0A1W2PPQ1 181 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 SNRPD3P62318 126 aaKnown RBP5.19□□□□□ -1.58
PTCD2-201ENST00000308077 PAFAH1B2P68402 229 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 HIST1H1AQ02539 215 aaPredicted RBP5.19□□□□□ -1.58
PTCD2-201ENST00000308077 PRR9Q5T870 116 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 RBPMS2Q6ZRY4 209 aaKnown RBP5.19□□□□□ -1.58
PTCD2-201ENST00000308077 LINC00482Q8N8I6 264 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 OR10J6PQ8NGY7 276 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 FAM210BQ96KR6 192 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 IMMP2LQ96T52 175 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 BIN3Q9NQY0 253 aa5.19□□□□□ -1.58
PTCD2-201ENST00000308077 TRBV24-1A0A075B6N3 115 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 TMEM238LA0A1B0GVL6 79 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 SH2D1AO60880 128 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 SAP30O75446 220 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 P01737 135 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 CD33P20138 364 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 S100PP25815 95 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 TCL1AP56279 114 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 RPL19P84098 196 aaKnown RBP5.18□□□□□ -1.58
PTCD2-201ENST00000308077 FAM19A4Q96LR4 140 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 LINC00477Q96M19 166 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 NDFIP1Q9BT67 221 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 RPP21Q9H633 154 aaKnown RBP5.18□□□□□ -1.58
PTCD2-201ENST00000308077 ZNF256Q9Y2P7 627 aaPredicted RBP5.18□□□□□ -1.58
PTCD2-201ENST00000308077 TRAV25A0A0B4J276 109 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 A0A0J9YX75 114 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 SMIM27A0A1W2PRY6 76 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 TRGC2P03986 189 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 SMUG1Q53HV7 270 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 FAM162BQ5T6X4 162 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 KCNIP4Q6PIL6 250 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 Q6ZQT7 251 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 ZFAND2AQ8N6M9 145 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 DAZAP1Q96EP5 407 aaKnown RBP5.18□□□□□ -1.58
PTCD2-201ENST00000308077 AGRNO00468 2067 aa5.18□□□□□ -1.58
PTCD2-201ENST00000308077 SORL1Q92673 2214 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 C1orf196B1AJZ1 125 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 IGLV1-51P01701 117 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 GZMBP10144 247 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 DEFB131AP59861 70 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 KIR3DS1Q14943 382 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 ZNF124Q15973 351 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 CT83Q5H943 113 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 ZNF575Q86XF7 245 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 OR4B1Q8NGF8 309 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 OR2D3Q8NGH3 330 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 TSKUQ8WUA8 353 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 FRZBQ92765 325 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 NEU1Q99519 415 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 SPAG8Q99932 426 aaPredicted RBP5.17□□□□□ -1.58
PTCD2-201ENST00000308077 SAV1Q9H4B6 383 aaPredicted RBP5.17□□□□□ -1.58
PTCD2-201ENST00000308077 MAP6D1Q9H9H5 199 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 LENEPQ9Y5L5 61 aa5.17□□□□□ -1.58
PTCD2-201ENST00000308077 KNCNA6PVL3 124 aa5.16□□□□□ -1.58
PTCD2-201ENST00000308077 J3KRW8 73 aa5.16□□□□□ -1.58
PTCD2-201ENST00000308077 SNRPEP62304 92 aaKnown RBP5.16□□□□□ -1.58
PTCD2-201ENST00000308077 ODF3L2Q3SX64 289 aa5.16□□□□□ -1.58
PTCD2-201ENST00000308077 FOXI2Q6ZQN5 318 aa5.16□□□□□ -1.58
PTCD2-201ENST00000308077 APRG1Q8IVJ8 170 aa5.16□□□□□ -1.58
PTCD2-201ENST00000308077 GTSF1Q8WW33 167 aa5.16□□□□□ -1.58
PTCD2-201ENST00000308077 KRTAP3-3Q9BYR6 98 aa5.16□□□□□ -1.58
PTCD2-201ENST00000308077 KRTAP3-2Q9BYR7 98 aa5.16□□□□□ -1.58
PTCD2-201ENST00000308077 C11orf21Q9P2W6 132 aa5.16□□□□□ -1.58
PTCD2-201ENST00000308077 OR4C46A6NHA9 309 aa5.16□□□□□ -1.58
PTCD2-201ENST00000308077 TYMSP04818 313 aa5.16□□□□□ -1.58
PTCD2-201ENST00000308077 CRISP2P16562 243 aa5.16□□□□□ -1.58
PTCD2-201ENST00000308077 NUP35Q8NFH5 326 aa5.16□□□□□ -1.58
PTCD2-201ENST00000308077 TENM3Q9P273 2699 aa5.16□□□□□ -1.58
PTCD2-201ENST00000308077 TRAV9-1A0A075B6T8 112 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 TMSB15BA0A087X1C1 80 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 TRBV7-9A0A0J9YWB2 115 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 A8MTW9 85 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 FABP5P3A8MUU1 101 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 HIGD1CA8MV81 97 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 A8MWL6 223 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 KLLNB2CW77 178 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 SPINK4O60575 86 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 HIST1H2BKO60814 126 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 IGKV3-20P01619 116 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 HIST1H2BJP06899 126 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 TRGC1P0CF51 173 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 HIST1H2BOP23527 126 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 HIST1H2BBP33778 126 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 HIST1H2BDP58876 126 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 RAB5BP61020 215 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 HIST1H2BCP62807 126 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 HIST2H2BEQ16778 126 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.15□□□□□ -1.58
PTCD2-201ENST00000308077 PRR31Q5SQ13 230 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 EBLN2Q6P2I7 272 aa5.15□□□□□ -1.58
PTCD2-201ENST00000308077 AMTNQ6UX39 209 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms