RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 DEFB131AP59861 70 aa13.08□□□□□ -0.32
KRT28-201ENST00000306658 GFRA4Q9GZZ7 299 aa13.08□□□□□ -0.32
KRT28-201ENST00000306658 NAT8BQ9UHF3 227 aa13.08□□□□□ -0.32
KRT28-201ENST00000306658 ZNF256Q9Y2P7 627 aaPredicted RBP13.08□□□□□ -0.32
KRT28-201ENST00000306658 XKRY2A2RUG3 117 aa13.07□□□□□ -0.32
KRT28-201ENST00000306658 FAM231BA6NCW3 169 aa13.07□□□□□ -0.32
KRT28-201ENST00000306658 IZUMO1RA6ND01 250 aa13.07□□□□□ -0.32
KRT28-201ENST00000306658 CD33P20138 364 aa13.07□□□□□ -0.32
KRT28-201ENST00000306658 RPS10P46783 165 aaKnown RBP13.07□□□□□ -0.32
KRT28-201ENST00000306658 TCL1AP56279 114 aa13.07□□□□□ -0.32
KRT28-201ENST00000306658 GDF5OSQ5U4N7 250 aa13.07□□□□□ -0.32
KRT28-201ENST00000306658 PRIMA1Q86XR5 153 aa13.07□□□□□ -0.32
KRT28-201ENST00000306658 FAM19A4Q96LR4 140 aa13.07□□□□□ -0.32
KRT28-201ENST00000306658 TMA7Q9Y2S6 64 aaKnown RBP13.07□□□□□ -0.32
KRT28-201ENST00000306658 TMEM189A5PLL7 270 aa13.06□□□□□ -0.32
KRT28-201ENST00000306658 GPX1P07203 203 aa13.06□□□□□ -0.32
KRT28-201ENST00000306658 CRISP2P16562 243 aa13.06□□□□□ -0.32
KRT28-201ENST00000306658 ODF3Q96PU9 254 aa13.06□□□□□ -0.32
KRT28-201ENST00000306658 TYMSP04818 313 aa13.05□□□□□ -0.32
KRT28-201ENST00000306658 CMC4P56277 68 aaPredicted RBP13.05□□□□□ -0.32
KRT28-201ENST00000306658 ZFAND2AQ8N6M9 145 aa13.05□□□□□ -0.32
KRT28-201ENST00000306658 NEU1Q99519 415 aa13.05□□□□□ -0.32
KRT28-201ENST00000306658 MAP6D1Q9H9H5 199 aa13.05□□□□□ -0.32
KRT28-201ENST00000306658 HIGD1CA8MV81 97 aa13.05□□□□□ -0.32
KRT28-201ENST00000306658 RPS20P60866 119 aaKnown RBP13.05□□□□□ -0.32
KRT28-201ENST00000306658 ZNF747Q9BV97 191 aa13.05□□□□□ -0.32
KRT28-201ENST00000306658 ORM1P02763 201 aa13.04□□□□□ -0.32
KRT28-201ENST00000306658 LEPP41159 167 aa13.04□□□□□ -0.32
KRT28-201ENST00000306658 INSL3P51460 131 aa13.04□□□□□ -0.32
KRT28-201ENST00000306658 NUP35Q8NFH5 326 aa13.04□□□□□ -0.32
KRT28-201ENST00000306658 SRD5A3Q9H8P0 318 aa13.04□□□□□ -0.32
KRT28-201ENST00000306658 TSPOP30536 169 aa13.03□□□□□ -0.32
KRT28-201ENST00000306658 APRG1Q8IVJ8 170 aa13.03□□□□□ -0.32
KRT28-201ENST00000306658 TRAV21A0A0B4J279 112 aa13.02□□□□□ -0.32
KRT28-201ENST00000306658 J3KRW8 73 aa13.02□□□□□ -0.32
KRT28-201ENST00000306658 HLA-DRB4P13762 266 aa13.02□□□□□ -0.32
KRT28-201ENST00000306658 FOXA3P55318 350 aaPredicted RBP13.02□□□□□ -0.32
KRT28-201ENST00000306658 LINC01559Q495D7 138 aa13.02□□□□□ -0.32
KRT28-201ENST00000306658 ACTL10Q5JWF8 245 aa13.02□□□□□ -0.32
KRT28-201ENST00000306658 C3orf56Q8N813 242 aa13.02□□□□□ -0.32
KRT28-201ENST00000306658 GTSF1Q8WW33 167 aa13.02□□□□□ -0.32
KRT28-201ENST00000306658 HLA-DRB4X5D2U9 266 aa13.02□□□□□ -0.32
KRT28-201ENST00000306658 KNCNA6PVL3 124 aa13.02□□□□□ -0.33
KRT28-201ENST00000306658 C1orf196B1AJZ1 125 aa13.02□□□□□ -0.33
KRT28-201ENST00000306658 KLLNB2CW77 178 aa13.02□□□□□ -0.33
KRT28-201ENST00000306658 IGKV3-20P01619 116 aa13.02□□□□□ -0.33
KRT28-201ENST00000306658 RNASE4P34096 147 aaKnown RBP13.02□□□□□ -0.33
KRT28-201ENST00000306658 PRR9Q5T870 116 aa13.02□□□□□ -0.33
KRT28-201ENST00000306658 C9orf66Q5T8R8 295 aa13.02□□□□□ -0.33
KRT28-201ENST00000306658 Q6AWC8 147 aa13.02□□□□□ -0.33
KRT28-201ENST00000306658 TMSB15BA0A087X1C1 80 aa13.01□□□□□ -0.33
KRT28-201ENST00000306658 OR11H12B2RN74 326 aa13.01□□□□□ -0.33
KRT28-201ENST00000306658 H3BMM0 161 aa13.01□□□□□ -0.33
KRT28-201ENST00000306658 SPINK4O60575 86 aa13.01□□□□□ -0.33
KRT28-201ENST00000306658 GZMBP10144 247 aa13.01□□□□□ -0.33
KRT28-201ENST00000306658 ODF3L2Q3SX64 289 aa13.01□□□□□ -0.33
KRT28-201ENST00000306658 TMEM158Q8WZ71 300 aa13.01□□□□□ -0.33
KRT28-201ENST00000306658 AGRNO00468 2067 aa13.01□□□□□ -0.33
KRT28-201ENST00000306658 CDKN1BP46527 198 aa13□□□□□ -0.33
KRT28-201ENST00000306658 COX19Q49B96 90 aa13□□□□□ -0.33
KRT28-201ENST00000306658 C12orf54Q6X4T0 127 aa13□□□□□ -0.33
KRT28-201ENST00000306658 PGLYRP4Q96LB8 373 aa13□□□□□ -0.33
KRT28-201ENST00000306658 FAM110AQ9BQ89 295 aa13□□□□□ -0.33
KRT28-201ENST00000306658 MCRIP2Q9BUT9 160 aaKnown RBP13□□□□□ -0.33
KRT28-201ENST00000306658 RAB5BP61020 215 aa12.99□□□□□ -0.33
KRT28-201ENST00000306658 BEAN1Q3B7T3 259 aa12.99□□□□□ -0.33
KRT28-201ENST00000306658 MRPL54Q6P161 138 aaKnown RBP12.99□□□□□ -0.33
KRT28-201ENST00000306658 RASL11AQ6T310 242 aa12.99□□□□□ -0.33
KRT28-201ENST00000306658 SHISA2Q6UWI4 295 aa12.99□□□□□ -0.33
KRT28-201ENST00000306658 ATP5L2Q7Z4Y8 100 aa12.99□□□□□ -0.33
KRT28-201ENST00000306658 A8MTW9 85 aa12.99□□□□□ -0.33
KRT28-201ENST00000306658 TRGC2P03986 189 aa12.99□□□□□ -0.33
KRT28-201ENST00000306658 ZNF124Q15973 351 aa12.99□□□□□ -0.33
KRT28-201ENST00000306658 AMTNQ6UX39 209 aa12.99□□□□□ -0.33
KRT28-201ENST00000306658 IGKV3D-20A0A0C4DH25 116 aa12.98□□□□□ -0.33
KRT28-201ENST00000306658 C7orf71A4D174 169 aa12.98□□□□□ -0.33
KRT28-201ENST00000306658 WDR73Q6P4I2 378 aa12.98□□□□□ -0.33
KRT28-201ENST00000306658 WFDC9Q8NEX5 89 aa12.98□□□□□ -0.33
KRT28-201ENST00000306658 BORCS7Q96B45 105 aa12.98□□□□□ -0.33
KRT28-201ENST00000306658 C11orf21Q9P2W6 132 aa12.98□□□□□ -0.33
KRT28-201ENST00000306658 M0R2Z0 102 aa12.97□□□□□ -0.33
KRT28-201ENST00000306658 KIR3DS1Q14943 382 aa12.97□□□□□ -0.33
KRT28-201ENST00000306658 CLUHP3Q96NS8 147 aa12.97□□□□□ -0.33
KRT28-201ENST00000306658 TPPP3Q9BW30 176 aa12.97□□□□□ -0.33
KRT28-201ENST00000306658 GNB1LQ9BYB4 327 aa12.97□□□□□ -0.33
KRT28-201ENST00000306658 TRAPPC1Q9Y5R8 145 aa12.97□□□□□ -0.33
KRT28-201ENST00000306658 SPINK13Q1W4C9 94 aa12.96□□□□□ -0.33
KRT28-201ENST00000306658 Q6ZQT7 251 aa12.96□□□□□ -0.33
KRT28-201ENST00000306658 STHQ8IWL8 128 aa12.96□□□□□ -0.33
KRT28-201ENST00000306658 FER1L6-AS1Q8NA97 138 aa12.96□□□□□ -0.33
KRT28-201ENST00000306658 NOTCH3Q9UM47 2321 aa12.96□□□□□ -0.34
KRT28-201ENST00000306658 FBN1P35555 2871 aaKnown RBP12.96□□□□□ -0.34
KRT28-201ENST00000306658 A0A1B0GUT8 65 aa12.96□□□□□ -0.34
KRT28-201ENST00000306658 GRIFINA4D1Z8 144 aa12.96□□□□□ -0.34
KRT28-201ENST00000306658 MT-ND6P03923 174 aa12.96□□□□□ -0.34
KRT28-201ENST00000306658 ZNF575Q86XF7 245 aa12.96□□□□□ -0.34
KRT28-201ENST00000306658 NAGKQ9UJ70 344 aa12.96□□□□□ -0.34
KRT28-201ENST00000306658 VWFP04275 2813 aa12.95□□□□□ -0.34
KRT28-201ENST00000306658 TRAV12-3A0A0B4J271 114 aa12.95□□□□□ -0.34
KRT28-201ENST00000306658 SNURFLB1AK76 121 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms