RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 HECTD1Q9ULT8 2610 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 E7EUB6 86 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 GHRHP01286 108 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 TRBV12-3P01733 135 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 LGALS3P17931 250 aaKnown RBP7.17□□□□□ -1.26
PTPRE-202ENST00000306042 PRR20EP86478 221 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 PRR20CP86479 221 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 PRR20DP86480 221 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 PRR20BP86481 221 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 PRR20AP86496 221 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 CIRBPQ14011 172 aaKnown RBP7.17□□□□□ -1.26
PTPRE-202ENST00000306042 TMEM61Q8N0U2 210 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 POLR3KQ9Y2Y1 108 aaPredicted RBP7.17□□□□□ -1.26
PTPRE-202ENST00000306042 NDUFA7O95182 113 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 IGLV2-14P01704 120 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 SCGB1C2P0DMR2 95 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 FANCD2OSQ96PS1 177 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 PRR25Q96S07 402 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 ATP5LO75964 103 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 C16orf54Q6UWD8 224 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 BUB3O43684 328 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 EVI2AP22794 236 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 TCTAP57738 103 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 CRIP3Q6Q6R5 217 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 CYSLTR1Q9Y271 337 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 A8MWV9 139 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 INS-IGF2F8WCM5 200 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 NMUP48645 174 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 HNRNPA3P51991 378 aaKnown RBP7.16□□□□□ -1.26
PTPRE-202ENST00000306042 SPXQ9BT56 116 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 ZNF702PQ9H963 129 aa7.16□□□□□ -1.26
PTPRE-202ENST00000306042 PROP1O75360 226 aa7.15□□□□□ -1.26
PTPRE-202ENST00000306042 IGLL1P15814 213 aa7.15□□□□□ -1.26
PTPRE-202ENST00000306042 IMMP2LQ96T52 175 aa7.15□□□□□ -1.26
PTPRE-202ENST00000306042 PYGO2Q9BRQ0 406 aa7.15□□□□□ -1.26
PTPRE-202ENST00000306042 IGHV3-16A0A0C4DH30 117 aa7.15□□□□□ -1.26
PTPRE-202ENST00000306042 SPART-AS1P0CW21 52 aa7.15□□□□□ -1.26
PTPRE-202ENST00000306042 HLA-DMBP28068 263 aa7.15□□□□□ -1.26
PTPRE-202ENST00000306042 DEFA6Q01524 100 aa7.15□□□□□ -1.26
PTPRE-202ENST00000306042 SRSF1Q07955 248 aaKnown RBP eCLIP7.15□□□□□ -1.26
PTPRE-202ENST00000306042 ANXA2RQ3ZCQ2 193 aa7.15□□□□□ -1.26
PTPRE-202ENST00000306042 C1orf159Q96HA4 380 aa7.15□□□□□ -1.26
PTPRE-202ENST00000306042 C8orf49Q96NF6 230 aa7.15□□□□□ -1.26
PTPRE-202ENST00000306042 NXT2Q9NPJ8 142 aaKnown RBP7.15□□□□□ -1.26
PTPRE-202ENST00000306042 ACANP16112 2415 aa7.15□□□□□ -1.27
PTPRE-202ENST00000306042 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.15□□□□□ -1.27
PTPRE-202ENST00000306042 DEFB135Q30KP9 77 aa7.15□□□□□ -1.27
PTPRE-202ENST00000306042 GAGE12JA6NER3 117 aa7.15□□□□□ -1.27
PTPRE-202ENST00000306042 GAGE1Q13065 139 aa7.15□□□□□ -1.27
PTPRE-202ENST00000306042 GAGE4Q13068 117 aa7.15□□□□□ -1.27
PTPRE-202ENST00000306042 GAGE5Q13069 117 aa7.15□□□□□ -1.27
PTPRE-202ENST00000306042 GAGE13Q4V321 117 aa7.15□□□□□ -1.27
PTPRE-202ENST00000306042 ORMDL2Q53FV1 153 aa7.15□□□□□ -1.27
PTPRE-202ENST00000306042 LINC01551Q86U37 167 aa7.15□□□□□ -1.27
PTPRE-202ENST00000306042 MRPL53Q96EL3 112 aaKnown RBP7.15□□□□□ -1.27
PTPRE-202ENST00000306042 C17orf77Q96MU5 243 aa7.15□□□□□ -1.27
PTPRE-202ENST00000306042 NOP10Q9NPE3 64 aaKnown RBP7.15□□□□□ -1.27
PTPRE-202ENST00000306042 CARHSP1Q9Y2V2 147 aaKnown RBP7.15□□□□□ -1.27
PTPRE-202ENST00000306042 MRPS16Q9Y3D3 137 aaKnown RBP7.15□□□□□ -1.27
PTPRE-202ENST00000306042 LY96Q9Y6Y9 160 aa7.15□□□□□ -1.27
PTPRE-202ENST00000306042 LAMA3Q16787 3333 aa7.14□□□□□ -1.27
PTPRE-202ENST00000306042 UNQ9165/PRO28630Q6UXU0 137 aa7.14□□□□□ -1.27
PTPRE-202ENST00000306042 ATP5L2Q7Z4Y8 100 aa7.14□□□□□ -1.27
PTPRE-202ENST00000306042 OR11H2Q8NH07 326 aa7.14□□□□□ -1.27
PTPRE-202ENST00000306042 PHLDA1Q8WV24 401 aaPredicted RBP7.14□□□□□ -1.27
PTPRE-202ENST00000306042 FXYD5Q96DB9 178 aa7.14□□□□□ -1.27
PTPRE-202ENST00000306042 A0A087WWC5 75 aa7.14□□□□□ -1.27
PTPRE-202ENST00000306042 OR5A1Q8NGJ0 315 aa7.14□□□□□ -1.27
PTPRE-202ENST00000306042 RNF183Q96D59 192 aa7.14□□□□□ -1.27
PTPRE-202ENST00000306042 SMIM12Q96EX1 92 aa7.14□□□□□ -1.27
PTPRE-202ENST00000306042 TM2D2Q9BX73 214 aa7.14□□□□□ -1.27
PTPRE-202ENST00000306042 PAX4O43316 350 aa7.14□□□□□ -1.27
PTPRE-202ENST00000306042 MRAP2Q96G30 205 aa7.14□□□□□ -1.27
PTPRE-202ENST00000306042 LSM4Q9Y4Z0 139 aaKnown RBP7.13□□□□□ -1.27
PTPRE-202ENST00000306042 LINC01549A6NIU2 74 aa7.13□□□□□ -1.27
PTPRE-202ENST00000306042 IFITM10A6NMD0 228 aa7.13□□□□□ -1.27
PTPRE-202ENST00000306042 GGTLC3B5MD39 225 aa7.13□□□□□ -1.27
PTPRE-202ENST00000306042 NHLRC4P0CG21 123 aaPredicted RBP7.13□□□□□ -1.27
PTPRE-202ENST00000306042 SRSF3P84103 164 aaKnown RBP7.13□□□□□ -1.27
PTPRE-202ENST00000306042 C10orf99Q6UWK7 81 aa7.13□□□□□ -1.27
PTPRE-202ENST00000306042 ZNF493Q6ZR52 646 aa7.13□□□□□ -1.27
PTPRE-202ENST00000306042 IGF2BP2-AS1Q96M15 143 aa7.13□□□□□ -1.27
PTPRE-202ENST00000306042 AGPAT4-IT1Q9H0P7 198 aa7.13□□□□□ -1.27
PTPRE-202ENST00000306042 GSN-AS1Q9NRJ2 163 aa7.13□□□□□ -1.27
PTPRE-202ENST00000306042 ANKRD17O75179 2603 aaKnown RBP7.13□□□□□ -1.27
PTPRE-202ENST00000306042 IGKV3D-20A0A0C4DH25 116 aa7.13□□□□□ -1.27
PTPRE-202ENST00000306042 DMRTA1Q5VZB9 504 aa7.13□□□□□ -1.27
PTPRE-202ENST00000306042 SORL1Q92673 2214 aa7.13□□□□□ -1.27
PTPRE-202ENST00000306042 VCYO14598 125 aa7.12□□□□□ -1.27
PTPRE-202ENST00000306042 NCR2O95944 276 aa7.12□□□□□ -1.27
PTPRE-202ENST00000306042 C15orf53Q8NAA6 179 aa7.12□□□□□ -1.27
PTPRE-202ENST00000306042 CCDC140Q96MF4 163 aa7.12□□□□□ -1.27
PTPRE-202ENST00000306042 F8P00451 2351 aa7.12□□□□□ -1.27
PTPRE-202ENST00000306042 A0A1B0GW64 132 aa7.12□□□□□ -1.27
PTPRE-202ENST00000306042 APOMO95445 188 aa7.12□□□□□ -1.27
PTPRE-202ENST00000306042 DEFB125Q8N687 156 aa7.12□□□□□ -1.27
PTPRE-202ENST00000306042 RNF152Q8N8N0 203 aa7.12□□□□□ -1.27
PTPRE-202ENST00000306042 LENEPQ9Y5L5 61 aa7.12□□□□□ -1.27
PTPRE-202ENST00000306042 C1orf229Q6ZS94 237 aaPredicted RBP7.12□□□□□ -1.27
PTPRE-202ENST00000306042 ZNF48Q96MX3 618 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms