RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 UNC79Q9P2D8 2635 aa4.97□□□□□ -1.61
USP47-201ENST00000305481 SONP18583 2426 aaKnown RBP4.97□□□□□ -1.61
USP47-201ENST00000305481 IGHV7-4-1A0A0J9YVY3 117 aa4.97□□□□□ -1.61
USP47-201ENST00000305481 RAB4AP20338 218 aa4.97□□□□□ -1.61
USP47-201ENST00000305481 LYZL1Q6UWQ5 148 aa4.97□□□□□ -1.61
USP47-201ENST00000305481 Q6ZQT7 251 aa4.97□□□□□ -1.61
USP47-201ENST00000305481 C9orf47Q6ZRZ4 202 aa4.97□□□□□ -1.61
USP47-201ENST00000305481 URB1-AS1Q96HZ7 61 aa4.97□□□□□ -1.61
USP47-201ENST00000305481 C16orf92Q96LL3 132 aa4.97□□□□□ -1.61
USP47-201ENST00000305481 DAZ1Q9NQZ3 744 aaKnown RBP4.97□□□□□ -1.61
USP47-201ENST00000305481 MYO9AB2RTY4 2548 aa4.97□□□□□ -1.61
USP47-201ENST00000305481 TMEM89A2RUT3 159 aa4.96□□□□□ -1.61
USP47-201ENST00000305481 DEFB1P60022 68 aa4.96□□□□□ -1.61
USP47-201ENST00000305481 GATD1Q8NB37 220 aa4.96□□□□□ -1.61
USP47-201ENST00000305481 MYOZ3Q8TDC0 251 aa4.96□□□□□ -1.61
USP47-201ENST00000305481 KCNS1Q96KK3 526 aa4.96□□□□□ -1.61
USP47-201ENST00000305481 TPPP3Q9BW30 176 aa4.96□□□□□ -1.61
USP47-201ENST00000305481 C11orf21Q9P2W6 132 aa4.96□□□□□ -1.61
USP47-201ENST00000305481 GCN1Q92616 2671 aaKnown RBP4.96□□□□□ -1.62
USP47-201ENST00000305481 LOC102724200A0A096LPH7 203 aaPredicted RBP4.96□□□□□ -1.62
USP47-201ENST00000305481 MUC21A0A0G2JKD1 596 aa4.96□□□□□ -1.62
USP47-201ENST00000305481 MUC21A0A140T8X8 626 aa4.96□□□□□ -1.62
USP47-201ENST00000305481 RNF151Q2KHN1 245 aa4.96□□□□□ -1.62
USP47-201ENST00000305481 MUC21Q5SSG8 566 aa4.96□□□□□ -1.62
USP47-201ENST00000305481 SIGLECL1Q8N7X8 197 aa4.96□□□□□ -1.62
USP47-201ENST00000305481 SMPXQ9UHP9 88 aa4.96□□□□□ -1.62
USP47-201ENST00000305481 NF1P21359 2839 aa4.96□□□□□ -1.62
USP47-201ENST00000305481 FABP5P3A8MUU1 101 aa4.96□□□□□ -1.62
USP47-201ENST00000305481 K7EMT4 169 aa4.96□□□□□ -1.62
USP47-201ENST00000305481 IGLC6P0CF74 106 aa4.96□□□□□ -1.62
USP47-201ENST00000305481 ZNF138P52744 262 aa4.96□□□□□ -1.62
USP47-201ENST00000305481 Q6AWC8 147 aa4.96□□□□□ -1.62
USP47-201ENST00000305481 FAM19A2Q8N3H0 131 aa4.96□□□□□ -1.62
USP47-201ENST00000305481 NRN1Q9NPD7 142 aa4.96□□□□□ -1.62
USP47-201ENST00000305481 TMEM213A2RRL7 107 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 M0QZ24 198 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 TCF21O43680 179 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 ZNF324O75467 553 aaPredicted RBP4.95□□□□□ -1.62
USP47-201ENST00000305481 SRSF2Q01130 221 aaKnown RBP4.95□□□□□ -1.62
USP47-201ENST00000305481 FOXE3Q13461 319 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 NIT1Q86X76 327 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 Q8N2B8 174 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 NDFIP1Q9BT67 221 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 SAMD10Q9BYL1 202 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 ANK3Q12955 4377 aaKnown RBP4.95□□□□□ -1.62
USP47-201ENST00000305481 ACANP16112 2415 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 IGKV3-7A0A075B6H7 116 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 IGKV3D-20A0A0C4DH25 116 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 FAM181BA6NEQ2 426 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 CBY3A6NI87 242 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 SRD5A1P18405 259 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 RIGQ13278 110 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 TMEM78Q5T7P6 136 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 PRR9Q5T870 116 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 RNF152Q8N8N0 203 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 ORM1P02763 201 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 PMCHP20382 165 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 CTRLP40313 264 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 RPL11P62913 178 aaKnown RBP4.95□□□□□ -1.62
USP47-201ENST00000305481 KRTAP1-1Q07627 177 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 LINC01559Q495D7 138 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 FAM106AQ4KMX7 169 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 ZNF493Q6ZR52 646 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 ZNF664Q8N3J9 261 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 ZNF738Q8NE65 137 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 SNHG12Q9BXW3 62 aa4.95□□□□□ -1.62
USP47-201ENST00000305481 A0A1B0GW15 77 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 F6UB75 175 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 SCGB1D1O95968 90 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 ELANEP08246 267 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 AMTP48728 403 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 C18orf65Q6ZTR6 163 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 Q8N976 141 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 FER1L6-AS1Q8NA97 138 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 NAGKQ9UJ70 344 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 IGHV4OR15-8A0A075B7B6 117 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 A0A087WW49 117 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 LGALS1P09382 135 aaKnown RBP4.94□□□□□ -1.62
USP47-201ENST00000305481 DCANP1Q8TF63 244 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 MSRB1Q9NZV6 116 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 NTF3P20783 257 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 RPS20P60866 119 aaKnown RBP4.94□□□□□ -1.62
USP47-201ENST00000305481 TDRG1Q3Y452 100 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 RNASEKQ6P5S7 137 aaKnown RBP4.94□□□□□ -1.62
USP47-201ENST00000305481 ZFAND2AQ8N6M9 145 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 FAM19A4Q96LR4 140 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 UBE2E2Q96LR5 201 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 CNFNQ9BYD5 112 aa4.94□□□□□ -1.62
USP47-201ENST00000305481 HIST1H1AQ02539 215 aaPredicted RBP4.93□□□□□ -1.62
USP47-201ENST00000305481 TCTEX1D4Q5JR98 221 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 UFC1Q9Y3C8 167 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 J3KRW8 73 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 OVOL1O14753 267 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 CDKN1BP46527 198 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 SYNJ2BPP57105 145 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 PKIAP61925 76 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 PMCHL1Q16048 86 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 FAM104BQ5XKR9 115 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 SHISA2Q6UWI4 295 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 AMN1Q8IY45 258 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms