RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 Q9H8V8 135 aa8.3□□□□□ -1.08
CLIP1-201ENST00000302528 SS18L2Q9UHA2 77 aa8.3□□□□□ -1.08
CLIP1-201ENST00000302528 AMTNQ6UX39 209 aa8.3□□□□□ -1.08
CLIP1-201ENST00000302528 UBE2AP49459 152 aa8.3□□□□□ -1.08
CLIP1-201ENST00000302528 A0A1B0GUS0 222 aa8.3□□□□□ -1.08
CLIP1-201ENST00000302528 CFC1BP0CG36 223 aa8.3□□□□□ -1.08
CLIP1-201ENST00000302528 CFC1P0CG37 223 aa8.3□□□□□ -1.08
CLIP1-201ENST00000302528 PSMB8P28062 276 aa8.3□□□□□ -1.08
CLIP1-201ENST00000302528 SRSF2Q01130 221 aaKnown RBP8.3□□□□□ -1.08
CLIP1-201ENST00000302528 CR1LQ2VPA4 569 aa8.3□□□□□ -1.08
CLIP1-201ENST00000302528 IGLL5B9A064 214 aa8.3□□□□□ -1.08
CLIP1-201ENST00000302528 ZNF134P52741 427 aa8.3□□□□□ -1.08
CLIP1-201ENST00000302528 TEX36Q5VZQ5 186 aa8.3□□□□□ -1.08
CLIP1-201ENST00000302528 PRR25Q96S07 402 aa8.3□□□□□ -1.08
CLIP1-201ENST00000302528 NOP10Q9NPE3 64 aaKnown RBP8.3□□□□□ -1.08
CLIP1-201ENST00000302528 POLEQ07864 2286 aa8.29□□□□□ -1.08
CLIP1-201ENST00000302528 SIGLEC8Q9NYZ4 499 aa8.29□□□□□ -1.08
CLIP1-201ENST00000302528 ACYP1P07311 99 aa8.29□□□□□ -1.08
CLIP1-201ENST00000302528 LYPD3O95274 346 aa8.29□□□□□ -1.08
CLIP1-201ENST00000302528 ZFP2Q6ZN57 461 aa8.29□□□□□ -1.08
CLIP1-201ENST00000302528 DYNAPQ8N1N2 210 aa8.29□□□□□ -1.08
CLIP1-201ENST00000302528 COX7B2Q8TF08 81 aa8.29□□□□□ -1.08
CLIP1-201ENST00000302528 MYLKQ15746 1914 aa8.29□□□□□ -1.08
CLIP1-201ENST00000302528 TSC2P49815 1807 aa8.29□□□□□ -1.08
CLIP1-201ENST00000302528 CADP27708 2225 aa8.29□□□□□ -1.08
CLIP1-201ENST00000302528 A0A0G2JRQ6 117 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 CD59P13987 128 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 MRPL53Q96EL3 112 aaKnown RBP8.28□□□□□ -1.08
CLIP1-201ENST00000302528 NPYP01303 97 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 CACNA1IQ9P0X4 2223 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 E7EQL1 145 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 J3QRE1 110 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 HERV-K104P63124 156 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 C5orf38Q86SI9 138 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 MESP1Q9BRJ9 268 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 FOXE3Q13461 319 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 C12orf74Q32Q52 190 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 C9orf47Q6ZRZ4 202 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 MUSTN1Q8IVN3 82 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 ZNRD1Q9P1U0 126 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 C20orf78Q9BR46 151 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 DOCK9Q9BZ29 2069 aa8.28□□□□□ -1.08
CLIP1-201ENST00000302528 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.27□□□□□ -1.08
CLIP1-201ENST00000302528 IGKV2-29A2NJV5 120 aaPredicted RBP8.27□□□□□ -1.08
CLIP1-201ENST00000302528 IGKV3D-7A0A0C4DH55 119 aa8.27□□□□□ -1.09
CLIP1-201ENST00000302528 IGLL1P15814 213 aa8.27□□□□□ -1.09
CLIP1-201ENST00000302528 PYGO2Q9BRQ0 406 aa8.27□□□□□ -1.09
CLIP1-201ENST00000302528 CCL18P55774 89 aa8.27□□□□□ -1.09
CLIP1-201ENST00000302528 WIPF3A6NGB9 483 aa8.27□□□□□ -1.09
CLIP1-201ENST00000302528 POU2AF1Q16633 256 aa8.27□□□□□ -1.09
CLIP1-201ENST00000302528 U3KQE9 123 aa8.27□□□□□ -1.09
CLIP1-201ENST00000302528 Q6ZRM9 215 aa8.27□□□□□ -1.09
CLIP1-201ENST00000302528 CYYR1Q96J86 154 aa8.27□□□□□ -1.09
CLIP1-201ENST00000302528 OPRPNQ99935 248 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-201ENST00000302528 MRPL36Q9P0J6 103 aaKnown RBP8.26□□□□□ -1.09
CLIP1-201ENST00000302528 NPSP0C0P6 89 aa8.26□□□□□ -1.09
CLIP1-201ENST00000302528 Q0VFX4 171 aa8.26□□□□□ -1.09
CLIP1-201ENST00000302528 SPTBN2O15020 2390 aa8.26□□□□□ -1.09
CLIP1-201ENST00000302528 IGHV7-4-1A0A0J9YVY3 117 aa8.26□□□□□ -1.09
CLIP1-201ENST00000302528 H3BRN7 92 aa8.26□□□□□ -1.09
CLIP1-201ENST00000302528 HIST2H2BCQ6DN03 193 aa8.26□□□□□ -1.09
CLIP1-201ENST00000302528 REG4Q9BYZ8 158 aa8.26□□□□□ -1.09
CLIP1-201ENST00000302528 NDUFA4L2Q9NRX3 87 aa8.26□□□□□ -1.09
CLIP1-201ENST00000302528 IGHV2-70DA0A0C4DH43 119 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 ATOX1O00244 68 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 NCOR1P1Q9H4R4 102 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 TET1Q8NFU7 2136 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 IGLV10-54A0A075B6I4 117 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 IGHV3-30P01768 117 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 IGHV3-33P01772 117 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 IGHV3-30-3P0DP02 117 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 IGHV3-30-5P0DP03 117 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 SPTSSBQ8NFR3 76 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 VWCEQ96DN2 955 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 DKK2Q9UBU2 259 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 H0Y9J4 135 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 H0YGX0 51 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 K7ERS5 55 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 C5orf63A6NC05 138 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 ETV2O00321 342 aaPredicted RBP8.25□□□□□ -1.09
CLIP1-201ENST00000302528 SIVA1O15304 175 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 PNRC2Q9NPJ4 139 aaKnown RBP8.25□□□□□ -1.09
CLIP1-201ENST00000302528 TMEM14BQ9NUH8 114 aa8.25□□□□□ -1.09
CLIP1-201ENST00000302528 FANCMQ8IYD8 2048 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 A0A0B4J2C4 111 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 J3QLI3 93 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 NDUFS7O75251 213 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 CASC2Q6XLA1 102 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 SMIM20Q8N5G0 67 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 FANCD2OSQ96PS1 177 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 SPATA25Q9BR10 227 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 ICOSQ9Y6W8 199 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 ZNF493Q6ZR52 646 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 Q6ZS49 121 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 Q6ZWC4 215 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 SND1-IT1Q9HBX3 110 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 ZNF581Q9P0T4 197 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 FOXI2Q6ZQN5 318 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 ZC2HC1AQ96GY0 325 aa8.24□□□□□ -1.09
CLIP1-201ENST00000302528 TMEM14CQ9P0S9 112 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 366.8 ms