RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 NDUFA12Q9UI09 145 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 PAX9P55771 341 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 Q0VFX4 171 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 NKAPP1Q8N9T2 125 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 TMEM243Q9BU79 118 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 A0A0G2JNJ9 132 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 J3QQQ9 107 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 FXYD5Q96DB9 178 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 Q9UFV3 132 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 PCDH15Q96QU1 1955 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 GAGE12JA6NER3 117 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 GAGE7O76087 117 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 GAGE12FP0CL80 117 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 GAGE12GP0CL81 117 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 GAGE12IP0CL82 117 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 GAGE4Q13068 117 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 ZNF726P1Q15940 193 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 SPACA3Q8IXA5 215 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 IGHV1OR15-1A0A075B7D0 117 aa6.12□□□□□ -1.43
SF3B3-201ENST00000302516 H3BUX3 64 aa6.12□□□□□ -1.43
SF3B3-201ENST00000302516 KLRD1Q13241 179 aa6.12□□□□□ -1.43
SF3B3-201ENST00000302516 C1orf122Q6ZSJ8 110 aa6.12□□□□□ -1.43
SF3B3-201ENST00000302516 ZC2HC1AQ96GY0 325 aa6.12□□□□□ -1.43
SF3B3-201ENST00000302516 SAA4P35542 130 aa6.12□□□□□ -1.43
SF3B3-201ENST00000302516 KLHL30-AS1Q8NEE0 82 aa6.12□□□□□ -1.43
SF3B3-201ENST00000302516 RMI2Q96E14 147 aa6.12□□□□□ -1.43
SF3B3-201ENST00000302516 C1orf147Q96MC9 270 aaPredicted RBP6.12□□□□□ -1.43
SF3B3-201ENST00000302516 TMEM126AQ9H061 195 aa6.12□□□□□ -1.43
SF3B3-201ENST00000302516 NBASA2RRP1 2371 aa6.12□□□□□ -1.43
SF3B3-201ENST00000302516 ETDBQ3ZM63 59 aa6.12□□□□□ -1.43
SF3B3-201ENST00000302516 LINC00479Q96M42 142 aa6.12□□□□□ -1.43
SF3B3-201ENST00000302516 PRDM6Q9NQX0 595 aa6.12□□□□□ -1.43
SF3B3-201ENST00000302516 IGHV2-70DA0A0C4DH43 119 aa6.11□□□□□ -1.43
SF3B3-201ENST00000302516 ZNF561-AS1K7EIQ3 104 aa6.11□□□□□ -1.43
SF3B3-201ENST00000302516 CRLF1O75462 422 aa6.11□□□□□ -1.43
SF3B3-201ENST00000302516 HERV-K104P63124 156 aa6.11□□□□□ -1.43
SF3B3-201ENST00000302516 PRSS57Q6UWY2 283 aa6.11□□□□□ -1.43
SF3B3-201ENST00000302516 A0A1B0GUS0 222 aa6.11□□□□□ -1.43
SF3B3-201ENST00000302516 NDUFS7O75251 213 aa6.11□□□□□ -1.43
SF3B3-201ENST00000302516 NPYP01303 97 aa6.11□□□□□ -1.43
SF3B3-201ENST00000302516 FOXG1P55316 489 aaPredicted RBP6.11□□□□□ -1.43
SF3B3-201ENST00000302516 NSUN5P1Q3KNT7 163 aa6.11□□□□□ -1.43
SF3B3-201ENST00000302516 LTBP2Q14767 1821 aa6.11□□□□□ -1.43
SF3B3-201ENST00000302516 C5orf63A6NC05 138 aa6.11□□□□□ -1.43
SF3B3-201ENST00000302516 PRB3Q04118 309 aaPredicted RBP6.11□□□□□ -1.43
SF3B3-201ENST00000302516 SUMO4Q6EEV6 95 aa6.11□□□□□ -1.43
SF3B3-201ENST00000302516 SMIM20Q8N5G0 67 aa6.11□□□□□ -1.43
SF3B3-201ENST00000302516 DEFB125Q8N687 156 aa6.11□□□□□ -1.43
SF3B3-201ENST00000302516 CEACAM8P31997 349 aaPredicted RBP6.1□□□□□ -1.43
SF3B3-201ENST00000302516 MRPL35Q9NZE8 188 aaKnown RBP6.1□□□□□ -1.43
SF3B3-201ENST00000302516 LYNX1G3V0Z9 82 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 LINC01619G3V211 115 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 LYNX1P0DP58 116 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 MSRB2Q9Y3D2 182 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 C15orf65H3BRN8 121 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 PSCAO43653 123 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 IGLV3-1P01715 115 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 C12orf74Q32Q52 190 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 IGFBPL1Q8WX77 278 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 J3QLI3 93 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 ATP6V0E2Q8NHE4 81 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 TTC28Q96AY4 2481 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 CD59P13987 128 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 ORMDL1Q9P0S3 153 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 HIGD1BQ9P298 99 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 CREBBPQ92793 2442 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 IGHV1-69DA0A0B4J2H0 117 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 IGLC7A0M8Q6 106 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 DKK1O94907 266 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 C17orf58Q2M2W7 97 aa6.1□□□□□ -1.43
SF3B3-201ENST00000302516 ATP6V0E1O15342 81 aa6.09□□□□□ -1.43
SF3B3-201ENST00000302516 APOC4P55056 127 aa6.09□□□□□ -1.43
SF3B3-201ENST00000302516 WFDC12Q8WWY7 111 aa6.09□□□□□ -1.43
SF3B3-201ENST00000302516 ZNF581Q9P0T4 197 aa6.09□□□□□ -1.43
SF3B3-201ENST00000302516 ATOX1O00244 68 aa6.09□□□□□ -1.43
SF3B3-201ENST00000302516 GAGE5Q13069 117 aa6.09□□□□□ -1.43
SF3B3-201ENST00000302516 GAGE6Q13070 117 aa6.09□□□□□ -1.43
SF3B3-201ENST00000302516 IL15RAQ13261 267 aa6.09□□□□□ -1.43
SF3B3-201ENST00000302516 LCNL1Q6ZST4 164 aa6.09□□□□□ -1.43
SF3B3-201ENST00000302516 TNCP24821 2201 aa6.09□□□□□ -1.43
SF3B3-201ENST00000302516 H3BMG7 143 aa6.09□□□□□ -1.43
SF3B3-201ENST00000302516 OVOL3O00110 214 aa6.09□□□□□ -1.43
SF3B3-201ENST00000302516 VOPP1Q96AW1 172 aa6.09□□□□□ -1.43
SF3B3-201ENST00000302516 RPL35AP18077 110 aaKnown RBP6.09□□□□□ -1.43
SF3B3-201ENST00000302516 TCTEX1D4Q5JR98 221 aa6.09□□□□□ -1.43
SF3B3-201ENST00000302516 ATP5G1P05496 136 aa6.09□□□□□ -1.44
SF3B3-201ENST00000302516 RNF144BQ7Z419 303 aa6.09□□□□□ -1.44
SF3B3-201ENST00000302516 SCRT2Q9NQ03 307 aa6.09□□□□□ -1.44
SF3B3-201ENST00000302516 J3KT08 172 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 K7ERJ3 54 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 Q8NFD4 153 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 MRAPQ8TCY5 172 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 ZNF625Q96I27 306 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-201ENST00000302516 FOXI2Q6ZQN5 318 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 K7EN84 100 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 MORN5Q5VZ52 161 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 SLC25A29Q8N8R3 303 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 NDUFC2O95298 119 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 CFHR4Q92496 578 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 CPAMD8Q8IZJ3 1885 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms