RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 LINC01006Q8NI28 216 aa16.78■□□□□ 0.28
SMAD1-201ENST00000302085 DPF1Q92782 380 aa16.78■□□□□ 0.28
SMAD1-201ENST00000302085 ARMS2P0C7Q2 107 aa16.77■□□□□ 0.28
SMAD1-201ENST00000302085 ID1P41134 155 aa16.77■□□□□ 0.28
SMAD1-201ENST00000302085 OR8A1Q8NGG7 326 aa16.77■□□□□ 0.28
SMAD1-201ENST00000302085 A0A1B0GUT8 65 aa16.77■□□□□ 0.27
SMAD1-201ENST00000302085 NUPR1O60356 82 aa16.77■□□□□ 0.27
SMAD1-201ENST00000302085 ORM1P02763 201 aa16.77■□□□□ 0.27
SMAD1-201ENST00000302085 S100A2P29034 98 aa16.77■□□□□ 0.27
SMAD1-201ENST00000302085 RPS20P60866 119 aaKnown RBP16.77■□□□□ 0.27
SMAD1-201ENST00000302085 SAMD13Q5VXD3 122 aa16.77■□□□□ 0.27
SMAD1-201ENST00000302085 HIST1H2BLQ99880 126 aa16.77■□□□□ 0.27
SMAD1-201ENST00000302085 LENEPQ9Y5L5 61 aa16.77■□□□□ 0.27
SMAD1-201ENST00000302085 CD28P10747 220 aa16.76■□□□□ 0.27
SMAD1-201ENST00000302085 FABP4P15090 132 aa16.76■□□□□ 0.27
SMAD1-201ENST00000302085 TFPI2P48307 235 aa16.76■□□□□ 0.27
SMAD1-201ENST00000302085 HIST1H1AQ02539 215 aaPredicted RBP16.76■□□□□ 0.27
SMAD1-201ENST00000302085 Q0VG73 95 aa16.76■□□□□ 0.27
SMAD1-201ENST00000302085 Q6AWC8 147 aa16.76■□□□□ 0.27
SMAD1-201ENST00000302085 TPPP3Q9BW30 176 aa16.76■□□□□ 0.27
SMAD1-201ENST00000302085 LYZL1Q6UWQ5 148 aa16.75■□□□□ 0.27
SMAD1-201ENST00000302085 C11orf44Q8N8P7 122 aa16.75■□□□□ 0.27
SMAD1-201ENST00000302085 WFDC12Q8WWY7 111 aa16.75■□□□□ 0.27
SMAD1-201ENST00000302085 C11orf21Q9P2W6 132 aa16.75■□□□□ 0.27
SMAD1-201ENST00000302085 K7EQG2 157 aa16.75■□□□□ 0.27
SMAD1-201ENST00000302085 SRIP30626 198 aa16.75■□□□□ 0.27
SMAD1-201ENST00000302085 LINC01559Q495D7 138 aa16.75■□□□□ 0.27
SMAD1-201ENST00000302085 PRR9Q5T870 116 aa16.75■□□□□ 0.27
SMAD1-201ENST00000302085 OR10D4PQ8NGN7 298 aa16.75■□□□□ 0.27
SMAD1-201ENST00000302085 HIVEP2P31629 2446 aa16.74■□□□□ 0.27
SMAD1-201ENST00000302085 F2Z2F3 143 aa16.74■□□□□ 0.27
SMAD1-201ENST00000302085 AMBPP02760 352 aa16.74■□□□□ 0.27
SMAD1-201ENST00000302085 RIGQ13278 110 aa16.74■□□□□ 0.27
SMAD1-201ENST00000302085 Q6ZQT7 251 aa16.74■□□□□ 0.27
SMAD1-201ENST00000302085 ZFAND2AQ8N6M9 145 aa16.74■□□□□ 0.27
SMAD1-201ENST00000302085 DLX4Q92988 240 aaPredicted RBP16.74■□□□□ 0.27
SMAD1-201ENST00000302085 FAM19A4Q96LR4 140 aa16.74■□□□□ 0.27
SMAD1-201ENST00000302085 LINC00310P59036 64 aa16.73■□□□□ 0.27
SMAD1-201ENST00000302085 IGKV3D-20A0A0C4DH25 116 aa16.73■□□□□ 0.27
SMAD1-201ENST00000302085 M0QZ24 198 aa16.73■□□□□ 0.27
SMAD1-201ENST00000302085 C12orf57Q99622 126 aa16.73■□□□□ 0.27
SMAD1-201ENST00000302085 IGLC6P0CF74 106 aa16.72■□□□□ 0.27
SMAD1-201ENST00000302085 OR9G4Q8NGQ1 327 aa16.72■□□□□ 0.27
SMAD1-201ENST00000302085 RAX2Q96IS3 184 aa16.72■□□□□ 0.27
SMAD1-201ENST00000302085 ZNF688P0C7X2 276 aa16.71■□□□□ 0.27
SMAD1-201ENST00000302085 BAGE3Q86Y29 109 aa16.71■□□□□ 0.27
SMAD1-201ENST00000302085 A0A1W2PRX2 142 aa16.71■□□□□ 0.27
SMAD1-201ENST00000302085 OR10J3Q5JRS4 329 aa16.71■□□□□ 0.27
SMAD1-201ENST00000302085 FER1L6-AS1Q8NA97 138 aa16.71■□□□□ 0.27
SMAD1-201ENST00000302085 GATD1Q8NB37 220 aa16.71■□□□□ 0.27
SMAD1-201ENST00000302085 ALKBH7Q9BT30 221 aaPredicted RBP16.71■□□□□ 0.27
SMAD1-201ENST00000302085 PEMTQ9UBM1 199 aa16.71■□□□□ 0.27
SMAD1-201ENST00000302085 MUC21A0A0G2JKD1 596 aa16.7■□□□□ 0.26
SMAD1-201ENST00000302085 MUC21A0A140T8X8 626 aa16.7■□□□□ 0.26
SMAD1-201ENST00000302085 A0A1B0GW15 77 aa16.7■□□□□ 0.26
SMAD1-201ENST00000302085 SERF1AO75920 110 aa16.7■□□□□ 0.26
SMAD1-201ENST00000302085 CSN3P07498 182 aa16.7■□□□□ 0.26
SMAD1-201ENST00000302085 PSMG4Q5JS54 123 aa16.7■□□□□ 0.26
SMAD1-201ENST00000302085 MUC21Q5SSG8 566 aa16.7■□□□□ 0.26
SMAD1-201ENST00000302085 BORCS7Q96B45 105 aa16.7■□□□□ 0.26
SMAD1-201ENST00000302085 PACRGQ96M98 296 aaPredicted RBP16.7■□□□□ 0.26
SMAD1-201ENST00000302085 CITED2Q99967 270 aaPredicted RBP16.7■□□□□ 0.26
SMAD1-201ENST00000302085 OTOGQ6ZRI0 2925 aa16.7■□□□□ 0.26
SMAD1-201ENST00000302085 NF1P21359 2839 aa16.7■□□□□ 0.26
SMAD1-201ENST00000302085 J3KRW8 73 aa16.69■□□□□ 0.26
SMAD1-201ENST00000302085 SMIM6P0DI80 62 aa16.69■□□□□ 0.26
SMAD1-201ENST00000302085 CTRLP40313 264 aa16.69■□□□□ 0.26
SMAD1-201ENST00000302085 NDUFA7O95182 113 aa16.69■□□□□ 0.26
SMAD1-201ENST00000302085 SSTP61278 116 aa16.69■□□□□ 0.26
SMAD1-201ENST00000302085 ESDP10768 282 aa16.68■□□□□ 0.26
SMAD1-201ENST00000302085 SNRPD3P62318 126 aaKnown RBP16.68■□□□□ 0.26
SMAD1-201ENST00000302085 JMJD8Q96S16 334 aa16.68■□□□□ 0.26
SMAD1-201ENST00000302085 TRBV7-9A0A0J9YWB2 115 aa16.68■□□□□ 0.26
SMAD1-201ENST00000302085 INAFM1C9JVW0 142 aa16.68■□□□□ 0.26
SMAD1-201ENST00000302085 APRG1Q8IVJ8 170 aa16.68■□□□□ 0.26
SMAD1-201ENST00000302085 C18orf32Q8TCD1 76 aa16.68■□□□□ 0.26
SMAD1-201ENST00000302085 LOC102724200A0A096LPH7 203 aaPredicted RBP16.67■□□□□ 0.26
SMAD1-201ENST00000302085 FHL3Q13643 280 aa16.67■□□□□ 0.26
SMAD1-201ENST00000302085 KIR3DS1Q14943 382 aa16.67■□□□□ 0.26
SMAD1-201ENST00000302085 IQCJQ1A5X6 159 aa16.67■□□□□ 0.26
SMAD1-201ENST00000302085 TSSC4Q9Y5U2 329 aaPredicted RBP16.67■□□□□ 0.26
SMAD1-201ENST00000302085 CUBNO60494 3623 aa16.66■□□□□ 0.26
SMAD1-201ENST00000302085 GPX1P07203 203 aa16.66■□□□□ 0.26
SMAD1-201ENST00000302085 CD33P20138 364 aa16.66■□□□□ 0.26
SMAD1-201ENST00000302085 TMEM18Q96B42 140 aa16.66■□□□□ 0.26
SMAD1-201ENST00000302085 CCL24O00175 119 aa16.66■□□□□ 0.26
SMAD1-201ENST00000302085 RNASE4P34096 147 aaKnown RBP16.66■□□□□ 0.26
SMAD1-201ENST00000302085 PAFAH1B2P68402 229 aa16.66■□□□□ 0.26
SMAD1-201ENST00000302085 PYY3Q5JQD4 70 aa16.66■□□□□ 0.26
SMAD1-201ENST00000302085 ZNF493Q6ZR52 646 aa16.66■□□□□ 0.26
SMAD1-201ENST00000302085 RCHY1Q96PM5 261 aa16.66■□□□□ 0.26
SMAD1-201ENST00000302085 A0A0J9YX75 114 aa16.65■□□□□ 0.26
SMAD1-201ENST00000302085 RNF114Q9Y508 228 aa16.65■□□□□ 0.26
SMAD1-201ENST00000302085 TRAV21A0A0B4J279 112 aa16.64■□□□□ 0.25
SMAD1-201ENST00000302085 FOSL1P15407 271 aa16.64■□□□□ 0.25
SMAD1-201ENST00000302085 NTF3P20783 257 aa16.64■□□□□ 0.25
SMAD1-201ENST00000302085 PROK1P58294 105 aa16.64■□□□□ 0.25
SMAD1-201ENST00000302085 CNFNQ9BYD5 112 aa16.64■□□□□ 0.25
SMAD1-201ENST00000302085 DEFB114Q30KQ6 69 aa16.63■□□□□ 0.25
SMAD1-201ENST00000302085 TMEM61Q8N0U2 210 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms