RNA–Protein interactions for RNA: ENST00000301773.9

RAB3IL1-201, Transcript of RAB3A interacting protein like 1, humanhuman

TSL 1 (best) BASIC

Gene RAB3IL1, Length 2,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1-201ENST00000301773 OR4X2Q8NGF9 303 aa11.77□□□□□ -0.52
RAB3IL1-201ENST00000301773 IGKV3D-20A0A0C4DH25 116 aa11.77□□□□□ -0.53
RAB3IL1-201ENST00000301773 NUTF2P61970 127 aaKnown RBP11.77□□□□□ -0.53
RAB3IL1-201ENST00000301773 MAP1LC3CQ9BXW4 147 aa11.77□□□□□ -0.53
RAB3IL1-201ENST00000301773 SOCS3O14543 225 aa11.76□□□□□ -0.53
RAB3IL1-201ENST00000301773 IFI27P40305 119 aaPredicted RBP11.76□□□□□ -0.53
RAB3IL1-201ENST00000301773 C20orf173Q96LM9 149 aa11.76□□□□□ -0.53
RAB3IL1-201ENST00000301773 NPFFR1Q9GZQ6 430 aa11.76□□□□□ -0.53
RAB3IL1-201ENST00000301773 SIGLEC8Q9NYZ4 499 aa11.76□□□□□ -0.53
RAB3IL1-201ENST00000301773 C11orf21Q9P2W6 132 aa11.76□□□□□ -0.53
RAB3IL1-201ENST00000301773 LENEPQ9Y5L5 61 aa11.76□□□□□ -0.53
RAB3IL1-201ENST00000301773 CHD6Q8TD26 2715 aa11.76□□□□□ -0.53
RAB3IL1-201ENST00000301773 USP9YO00507 2555 aaPredicted RBP11.76□□□□□ -0.53
RAB3IL1-201ENST00000301773 LRRK2Q5S007 2527 aa11.76□□□□□ -0.53
RAB3IL1-201ENST00000301773 OR4C46A6NHA9 309 aa11.75□□□□□ -0.53
RAB3IL1-201ENST00000301773 J3QLI3 93 aa11.75□□□□□ -0.53
RAB3IL1-201ENST00000301773 COX6B1P14854 86 aa11.75□□□□□ -0.53
RAB3IL1-201ENST00000301773 PET117Q6UWS5 81 aa11.75□□□□□ -0.53
RAB3IL1-201ENST00000301773 OR10AG1Q8NH19 301 aa11.75□□□□□ -0.53
RAB3IL1-201ENST00000301773 IGLL1P15814 213 aa11.75□□□□□ -0.53
RAB3IL1-201ENST00000301773 MSRB1Q9NZV6 116 aa11.75□□□□□ -0.53
RAB3IL1-201ENST00000301773 CKS2P33552 79 aa11.74□□□□□ -0.53
RAB3IL1-201ENST00000301773 SRSF1Q07955 248 aaKnown RBP eCLIP11.74□□□□□ -0.53
RAB3IL1-201ENST00000301773 ZNF738Q8NE65 137 aa11.74□□□□□ -0.53
RAB3IL1-201ENST00000301773 RNF185Q96GF1 192 aa11.74□□□□□ -0.53
RAB3IL1-201ENST00000301773 FBN2P35556 2912 aa11.74□□□□□ -0.53
RAB3IL1-201ENST00000301773 DEFB112Q30KQ8 113 aa11.74□□□□□ -0.53
RAB3IL1-201ENST00000301773 LCNL1Q6ZST4 164 aa11.74□□□□□ -0.53
RAB3IL1-201ENST00000301773 ZNF747Q9BV97 191 aa11.74□□□□□ -0.53
RAB3IL1-201ENST00000301773 A0A096LNJ9 63 aa11.73□□□□□ -0.53
RAB3IL1-201ENST00000301773 IGHV4-59P01825 116 aa11.73□□□□□ -0.53
RAB3IL1-201ENST00000301773 PRRC2AP48634 2157 aaKnown RBP11.73□□□□□ -0.53
RAB3IL1-201ENST00000301773 FAM106AQ4KMX7 169 aa11.73□□□□□ -0.53
RAB3IL1-201ENST00000301773 Q6ZN92 141 aa11.73□□□□□ -0.53
RAB3IL1-201ENST00000301773 CENPEQ02224 2701 aa11.73□□□□□ -0.53
RAB3IL1-201ENST00000301773 IGHV7-4-1A0A0J9YVY3 117 aa11.72□□□□□ -0.53
RAB3IL1-201ENST00000301773 LOC389332A0A1B0GUA5 103 aa11.72□□□□□ -0.53
RAB3IL1-201ENST00000301773 OVOL1O14753 267 aa11.72□□□□□ -0.53
RAB3IL1-201ENST00000301773 NPYP01303 97 aa11.72□□□□□ -0.53
RAB3IL1-201ENST00000301773 PPBPP02775 128 aa11.72□□□□□ -0.53
RAB3IL1-201ENST00000301773 LINC00477Q96M19 166 aa11.72□□□□□ -0.53
RAB3IL1-201ENST00000301773 ZANQ9Y493 2812 aa11.72□□□□□ -0.53
RAB3IL1-201ENST00000301773 CSMD2Q7Z408 3487 aa11.72□□□□□ -0.53
RAB3IL1-201ENST00000301773 POLQO75417 2590 aa11.72□□□□□ -0.53
RAB3IL1-201ENST00000301773 HNRNPA3P51991 378 aaKnown RBP11.72□□□□□ -0.53
RAB3IL1-201ENST00000301773 FOXE3Q13461 319 aa11.72□□□□□ -0.53
RAB3IL1-201ENST00000301773 LINC01545Q5VT33 79 aa11.72□□□□□ -0.53
RAB3IL1-201ENST00000301773 SMKR1H3BMG3 65 aa11.71□□□□□ -0.53
RAB3IL1-201ENST00000301773 PSMB8P28062 276 aa11.71□□□□□ -0.53
RAB3IL1-201ENST00000301773 LOXL1Q08397 574 aaPredicted RBP11.71□□□□□ -0.53
RAB3IL1-201ENST00000301773 ST20Q9HBF5 79 aa11.71□□□□□ -0.53
RAB3IL1-201ENST00000301773 DAZ1Q9NQZ3 744 aaKnown RBP11.71□□□□□ -0.53
RAB3IL1-201ENST00000301773 PEF1Q9UBV8 284 aaKnown RBP11.71□□□□□ -0.53
RAB3IL1-201ENST00000301773 LAMTOR2Q9Y2Q5 125 aa11.71□□□□□ -0.53
RAB3IL1-201ENST00000301773 TGFAP01135 160 aa11.71□□□□□ -0.54
RAB3IL1-201ENST00000301773 TMEM95Q3KNT9 176 aa11.71□□□□□ -0.54
RAB3IL1-201ENST00000301773 PRR9Q5T870 116 aa11.71□□□□□ -0.54
RAB3IL1-201ENST00000301773 RHPN1-AS1Q9BWJ2 59 aa11.71□□□□□ -0.54
RAB3IL1-201ENST00000301773 K7EMT4 169 aa11.7□□□□□ -0.54
RAB3IL1-201ENST00000301773 TCF21O43680 179 aa11.7□□□□□ -0.54
RAB3IL1-201ENST00000301773 NCR2O95944 276 aa11.7□□□□□ -0.54
RAB3IL1-201ENST00000301773 TSPOP30536 169 aa11.7□□□□□ -0.54
RAB3IL1-201ENST00000301773 TM4SF20Q53R12 229 aa11.7□□□□□ -0.54
RAB3IL1-201ENST00000301773 PRSS57Q6UWY2 283 aa11.7□□□□□ -0.54
RAB3IL1-201ENST00000301773 OR10J6PQ8NGY7 276 aa11.7□□□□□ -0.54
RAB3IL1-201ENST00000301773 MRPS16Q9Y3D3 137 aaKnown RBP11.7□□□□□ -0.54
RAB3IL1-201ENST00000301773 TIMM8BQ9Y5J9 83 aaPredicted RBP11.7□□□□□ -0.54
RAB3IL1-201ENST00000301773 IGHV4-4A0A075B6R2 117 aa11.69□□□□□ -0.54
RAB3IL1-201ENST00000301773 TMEM89A2RUT3 159 aa11.69□□□□□ -0.54
RAB3IL1-201ENST00000301773 SNAI2O43623 268 aa11.69□□□□□ -0.54
RAB3IL1-201ENST00000301773 RPLP1P05386 114 aaKnown RBP11.69□□□□□ -0.54
RAB3IL1-201ENST00000301773 ZFAND2AQ8N6M9 145 aa11.69□□□□□ -0.54
RAB3IL1-201ENST00000301773 SMPXQ9UHP9 88 aa11.69□□□□□ -0.54
RAB3IL1-201ENST00000301773 DOPEY2Q9Y3R5 2298 aa11.69□□□□□ -0.54
RAB3IL1-201ENST00000301773 PTPN13Q12923 2485 aa11.69□□□□□ -0.54
RAB3IL1-201ENST00000301773 LINC01546A6NGU7 62 aa11.69□□□□□ -0.54
RAB3IL1-201ENST00000301773 FSHBP01225 129 aa11.69□□□□□ -0.54
RAB3IL1-201ENST00000301773 Q6ZQT7 251 aa11.69□□□□□ -0.54
RAB3IL1-201ENST00000301773 A1L4Q6 167 aa11.68□□□□□ -0.54
RAB3IL1-201ENST00000301773 HBDP02042 147 aa11.68□□□□□ -0.54
RAB3IL1-201ENST00000301773 FAM19A4Q96LR4 140 aa11.68□□□□□ -0.54
RAB3IL1-201ENST00000301773 MAP1LC3AQ9H492 121 aa11.68□□□□□ -0.54
RAB3IL1-201ENST00000301773 hDV102S1A0JD36 115 aa11.68□□□□□ -0.54
RAB3IL1-201ENST00000301773 RPL11P62913 178 aaKnown RBP11.68□□□□□ -0.54
RAB3IL1-201ENST00000301773 CACNG7P62955 275 aa11.68□□□□□ -0.54
RAB3IL1-201ENST00000301773 MAPK1IP1LQ8NDC0 245 aa11.68□□□□□ -0.54
RAB3IL1-201ENST00000301773 TRBV7-9A0A0J9YWB2 115 aa11.67□□□□□ -0.54
RAB3IL1-201ENST00000301773 APRG1Q8IVJ8 170 aa11.67□□□□□ -0.54
RAB3IL1-201ENST00000301773 OR8A1Q8NGG7 326 aa11.67□□□□□ -0.54
RAB3IL1-201ENST00000301773 MCRIP2Q9BUT9 160 aaKnown RBP11.67□□□□□ -0.54
RAB3IL1-201ENST00000301773 TRAV21A0A0B4J279 112 aa11.66□□□□□ -0.54
RAB3IL1-201ENST00000301773 HSBP1L1C9JCN9 74 aa11.66□□□□□ -0.54
RAB3IL1-201ENST00000301773 RNF223E7ERA6 249 aa11.66□□□□□ -0.54
RAB3IL1-201ENST00000301773 H0Y8G0 127 aa11.66□□□□□ -0.54
RAB3IL1-201ENST00000301773 TCAPO15273 167 aa11.66□□□□□ -0.54
RAB3IL1-201ENST00000301773 GAS8-AS1O95177 125 aa11.66□□□□□ -0.54
RAB3IL1-201ENST00000301773 TNFRSF6BO95407 300 aa11.66□□□□□ -0.54
RAB3IL1-201ENST00000301773 BATFQ16520 125 aa11.66□□□□□ -0.54
RAB3IL1-201ENST00000301773 IGHV4-31P0DP07 118 aa11.66□□□□□ -0.54
RAB3IL1-201ENST00000301773 DEFB1P60022 68 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms