RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 RTL8CO15255 209 aa12.82□□□□□ -0.36
TMEM88-201ENST00000301599 IFNA1P01562 189 aa12.82□□□□□ -0.36
TMEM88-201ENST00000301599 LINC00477Q96M19 166 aa12.82□□□□□ -0.36
TMEM88-201ENST00000301599 SMCO4Q9NRQ5 59 aa12.82□□□□□ -0.36
TMEM88-201ENST00000301599 C17orf112F2Z3M2 114 aa12.81□□□□□ -0.36
TMEM88-201ENST00000301599 NDUFB4O95168 129 aa12.81□□□□□ -0.36
TMEM88-201ENST00000301599 NUDT3O95989 172 aa12.81□□□□□ -0.36
TMEM88-201ENST00000301599 RHEBQ15382 184 aa12.81□□□□□ -0.36
TMEM88-201ENST00000301599 GCSAMLQ5JQS6 135 aa12.81□□□□□ -0.36
TMEM88-201ENST00000301599 OR10G4Q8NGN3 311 aa12.81□□□□□ -0.36
TMEM88-201ENST00000301599 BLNKQ8WV28 456 aa12.81□□□□□ -0.36
TMEM88-201ENST00000301599 SH3BGRL3Q9H299 93 aa12.81□□□□□ -0.36
TMEM88-201ENST00000301599 AAMDCQ9H7C9 122 aa12.81□□□□□ -0.36
TMEM88-201ENST00000301599 RBFOX3A6NFN3 312 aa12.8□□□□□ -0.36
TMEM88-201ENST00000301599 SNURFLB1AK76 121 aa12.8□□□□□ -0.36
TMEM88-201ENST00000301599 M0R3E3 92 aa12.8□□□□□ -0.36
TMEM88-201ENST00000301599 SLC25A5P05141 298 aaKnown RBP12.8□□□□□ -0.36
TMEM88-201ENST00000301599 PYYP10082 97 aa12.8□□□□□ -0.36
TMEM88-201ENST00000301599 ADCYAP1P18509 176 aa12.8□□□□□ -0.36
TMEM88-201ENST00000301599 KHDC3LQ587J8 217 aa12.8□□□□□ -0.36
TMEM88-201ENST00000301599 SOHLH1Q5JUK2 328 aa12.8□□□□□ -0.36
TMEM88-201ENST00000301599 PYGO2Q9BRQ0 406 aa12.8□□□□□ -0.36
TMEM88-201ENST00000301599 KCNIP2Q9NS61 270 aa12.8□□□□□ -0.36
TMEM88-201ENST00000301599 A0A1B0GVY2 172 aa12.79□□□□□ -0.36
TMEM88-201ENST00000301599 NBEAP1P0C6P0 100 aa12.79□□□□□ -0.36
TMEM88-201ENST00000301599 PPT1P50897 306 aa12.79□□□□□ -0.36
TMEM88-201ENST00000301599 ERCC8Q13216 396 aa12.79□□□□□ -0.36
TMEM88-201ENST00000301599 MBD3L1Q8WWY6 194 aa12.79□□□□□ -0.36
TMEM88-201ENST00000301599 SLC25A2Q9BXI2 301 aa12.79□□□□□ -0.36
TMEM88-201ENST00000301599 WDR61Q9GZS3 305 aaKnown RBP12.79□□□□□ -0.36
TMEM88-201ENST00000301599 AGPAT4-IT1Q9H0P7 198 aa12.79□□□□□ -0.36
TMEM88-201ENST00000301599 OR51M1Q9H341 326 aa12.79□□□□□ -0.36
TMEM88-201ENST00000301599 CCL18P55774 89 aa12.78□□□□□ -0.36
TMEM88-201ENST00000301599 SRSF3P84103 164 aaKnown RBP12.78□□□□□ -0.36
TMEM88-201ENST00000301599 FLI1Q01543 452 aaPredicted RBP12.78□□□□□ -0.36
TMEM88-201ENST00000301599 OR5I1Q13606 314 aa12.78□□□□□ -0.36
TMEM88-201ENST00000301599 ICAM4Q14773 271 aa12.78□□□□□ -0.36
TMEM88-201ENST00000301599 ZNF506Q5JVG8 444 aa12.78□□□□□ -0.36
TMEM88-201ENST00000301599 MIR17HGQ75NE6 70 aa12.78□□□□□ -0.36
TMEM88-201ENST00000301599 EXOC3-AS1Q8N2X6 119 aa12.78□□□□□ -0.36
TMEM88-201ENST00000301599 LINC00612Q8N6U2 182 aa12.78□□□□□ -0.36
TMEM88-201ENST00000301599 C15orf54Q8N8G6 183 aa12.78□□□□□ -0.36
TMEM88-201ENST00000301599 FAM167A-AS1Q96KT0 104 aa12.78□□□□□ -0.36
TMEM88-201ENST00000301599 DNAH17Q9UFH2 4485 aa12.77□□□□□ -0.36
TMEM88-201ENST00000301599 HECTD4Q9Y4D8 3996 aa12.77□□□□□ -0.36
TMEM88-201ENST00000301599 LOC105371267A0A1B0GV96 52 aa12.77□□□□□ -0.37
TMEM88-201ENST00000301599 C7orf71A4D174 169 aa12.77□□□□□ -0.37
TMEM88-201ENST00000301599 C1orf134Q5TEV5 83 aa12.77□□□□□ -0.37
TMEM88-201ENST00000301599 FAM122CQ6P4D5 195 aa12.77□□□□□ -0.37
TMEM88-201ENST00000301599 ATRAIDQ6UW56 229 aa12.77□□□□□ -0.37
TMEM88-201ENST00000301599 C9orf47Q6ZRZ4 202 aa12.77□□□□□ -0.37
TMEM88-201ENST00000301599 MRPL32Q9BYC8 188 aaKnown RBP12.77□□□□□ -0.37
TMEM88-201ENST00000301599 GAGE12BA1L429 117 aa12.76□□□□□ -0.37
TMEM88-201ENST00000301599 GAGE7O76087 117 aa12.76□□□□□ -0.37
TMEM88-201ENST00000301599 GPX1P07203 203 aa12.76□□□□□ -0.37
TMEM88-201ENST00000301599 GAGE12FP0CL80 117 aa12.76□□□□□ -0.37
TMEM88-201ENST00000301599 GAGE12GP0CL81 117 aa12.76□□□□□ -0.37
TMEM88-201ENST00000301599 GAGE12IP0CL82 117 aa12.76□□□□□ -0.37
TMEM88-201ENST00000301599 RNASE4P34096 147 aaKnown RBP12.76□□□□□ -0.37
TMEM88-201ENST00000301599 DAZ2Q13117 558 aaKnown RBP12.76□□□□□ -0.37
TMEM88-201ENST00000301599 SFT2D1Q8WV19 159 aa12.76□□□□□ -0.37
TMEM88-201ENST00000301599 FAM19A4Q96LR4 140 aa12.76□□□□□ -0.37
TMEM88-201ENST00000301599 PAXXQ9BUH6 204 aa12.76□□□□□ -0.37
TMEM88-201ENST00000301599 FUT9Q9Y231 359 aa12.76□□□□□ -0.37
TMEM88-201ENST00000301599 DNAH2Q9P225 4427 aa12.76□□□□□ -0.37
TMEM88-201ENST00000301599 KLLNB2CW77 178 aa12.75□□□□□ -0.37
TMEM88-201ENST00000301599 B4DEV8 164 aa12.75□□□□□ -0.37
TMEM88-201ENST00000301599 ZNF324O75467 553 aaPredicted RBP12.75□□□□□ -0.37
TMEM88-201ENST00000301599 TMEM78Q5T7P6 136 aa12.75□□□□□ -0.37
TMEM88-201ENST00000301599 LINC00467Q9BRT7 94 aa12.75□□□□□ -0.37
TMEM88-201ENST00000301599 CRISP2P16562 243 aa12.74□□□□□ -0.37
TMEM88-201ENST00000301599 PNRC1Q12796 327 aaPredicted RBP12.74□□□□□ -0.37
TMEM88-201ENST00000301599 ZNRF2Q8NHG8 242 aa12.74□□□□□ -0.37
TMEM88-201ENST00000301599 FXYD5Q96DB9 178 aa12.74□□□□□ -0.37
TMEM88-201ENST00000301599 ZNF503Q96F45 646 aa12.74□□□□□ -0.37
TMEM88-201ENST00000301599 TRAV26-1A0A087WT03 109 aa12.73□□□□□ -0.37
TMEM88-201ENST00000301599 FAM74A7A6NL05 159 aa12.73□□□□□ -0.37
TMEM88-201ENST00000301599 OR10J4P0C629 311 aa12.73□□□□□ -0.37
TMEM88-201ENST00000301599 FHITP49789 147 aa12.73□□□□□ -0.37
TMEM88-201ENST00000301599 ACOT6Q3I5F7 207 aaPredicted RBP12.73□□□□□ -0.37
TMEM88-201ENST00000301599 ANXA2RQ3ZCQ2 193 aa12.73□□□□□ -0.37
TMEM88-201ENST00000301599 FAM74A3Q4VXF1 159 aa12.73□□□□□ -0.37
TMEM88-201ENST00000301599 RXFP4Q8TDU9 374 aa12.73□□□□□ -0.37
TMEM88-201ENST00000301599 VGLL1Q99990 258 aa12.73□□□□□ -0.37
TMEM88-201ENST00000301599 ACTR3CQ9C0K3 210 aaPredicted RBP12.73□□□□□ -0.37
TMEM88-201ENST00000301599 GSN-AS1Q9NRJ2 163 aa12.73□□□□□ -0.37
TMEM88-201ENST00000301599 ZNF492Q9P255 531 aa12.73□□□□□ -0.37
TMEM88-201ENST00000301599 LINC00588Q9Y4M8 146 aa12.73□□□□□ -0.37
TMEM88-201ENST00000301599 NACAE9PAV3 2078 aa12.73□□□□□ -0.37
TMEM88-201ENST00000301599 HERC2O95714 4834 aa12.72□□□□□ -0.37
TMEM88-201ENST00000301599 IGKV2-40A0A087WW87 121 aaPredicted RBP12.72□□□□□ -0.37
TMEM88-201ENST00000301599 NBDYA0A0U1RRE5 68 aa12.72□□□□□ -0.37
TMEM88-201ENST00000301599 CTXND1A0A1B0GTU2 59 aa12.72□□□□□ -0.37
TMEM88-201ENST00000301599 H3BNG1 76 aa12.72□□□□□ -0.37
TMEM88-201ENST00000301599 M0R036 132 aa12.72□□□□□ -0.37
TMEM88-201ENST00000301599 OR7C2O60412 319 aa12.72□□□□□ -0.37
TMEM88-201ENST00000301599 IGKV2D-40P01614 121 aaPredicted RBP12.72□□□□□ -0.37
TMEM88-201ENST00000301599 CSN1S1P47710 185 aa12.72□□□□□ -0.37
TMEM88-201ENST00000301599 FFAR4Q5NUL3 377 aa12.72□□□□□ -0.37
TMEM88-201ENST00000301599 Q6ZTI0 123 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms