RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 B5MCH6 92 aa12.36□□□□□ -0.43
CACNB3-201ENST00000301050 TNFRSF13BO14836 293 aaPredicted RBP12.36□□□□□ -0.43
CACNB3-201ENST00000301050 RBP4P02753 201 aa12.36□□□□□ -0.43
CACNB3-201ENST00000301050 NXT2Q9NPJ8 142 aaKnown RBP12.36□□□□□ -0.43
CACNB3-201ENST00000301050 MSRB1Q9NZV6 116 aa12.36□□□□□ -0.43
CACNB3-201ENST00000301050 CTSZQ9UBR2 303 aa12.36□□□□□ -0.43
CACNB3-201ENST00000301050 RALYQ9UKM9 306 aaKnown RBP12.36□□□□□ -0.43
CACNB3-201ENST00000301050 LYNX1G3V0Z9 82 aa12.35□□□□□ -0.43
CACNB3-201ENST00000301050 HOXA3O43365 443 aaPredicted RBP12.35□□□□□ -0.43
CACNB3-201ENST00000301050 LYNX1P0DP58 116 aa12.35□□□□□ -0.43
CACNB3-201ENST00000301050 TMEM200BQ69YZ2 307 aa12.35□□□□□ -0.43
CACNB3-201ENST00000301050 TNFRSF6BO95407 300 aa12.35□□□□□ -0.43
CACNB3-201ENST00000301050 LY6DQ14210 128 aa12.35□□□□□ -0.43
CACNB3-201ENST00000301050 LINC01559Q495D7 138 aa12.35□□□□□ -0.43
CACNB3-201ENST00000301050 SHISA2Q6UWI4 295 aa12.35□□□□□ -0.43
CACNB3-201ENST00000301050 UFC1Q9Y3C8 167 aa12.35□□□□□ -0.43
CACNB3-201ENST00000301050 LINC01548A6NM66 108 aa12.34□□□□□ -0.43
CACNB3-201ENST00000301050 VMA21Q3ZAQ7 101 aa12.34□□□□□ -0.43
CACNB3-201ENST00000301050 B9A039 149 aa12.34□□□□□ -0.43
CACNB3-201ENST00000301050 NDUFB3O43676 98 aa12.34□□□□□ -0.43
CACNB3-201ENST00000301050 IL4P05112 153 aa12.34□□□□□ -0.43
CACNB3-201ENST00000301050 PPDPFLQ8WWR9 84 aa12.34□□□□□ -0.43
CACNB3-201ENST00000301050 CHD8Q9HCK8 2581 aa12.34□□□□□ -0.43
CACNB3-201ENST00000301050 EGR2P11161 476 aaPredicted RBP12.34□□□□□ -0.43
CACNB3-201ENST00000301050 GATA1P15976 413 aaPredicted RBP12.34□□□□□ -0.43
CACNB3-201ENST00000301050 PSMB2P49721 201 aa12.34□□□□□ -0.43
CACNB3-201ENST00000301050 FBXL19-AS1Q494R0 122 aa12.34□□□□□ -0.43
CACNB3-201ENST00000301050 LYPD1Q8N2G4 141 aa12.34□□□□□ -0.43
CACNB3-201ENST00000301050 RPEQ96AT9 228 aa12.34□□□□□ -0.43
CACNB3-201ENST00000301050 SHANK2-AS3Q9BTD1 123 aa12.33□□□□□ -0.44
CACNB3-201ENST00000301050 NCBP2LA6PVI3 153 aaKnown RBP12.33□□□□□ -0.44
CACNB3-201ENST00000301050 ZFAND6Q6FIF0 208 aa12.33□□□□□ -0.44
CACNB3-201ENST00000301050 SFTA2Q6UW10 78 aa12.33□□□□□ -0.44
CACNB3-201ENST00000301050 LINC01619G3V211 115 aa12.32□□□□□ -0.44
CACNB3-201ENST00000301050 NDUFA3O95167 84 aa12.32□□□□□ -0.44
CACNB3-201ENST00000301050 IGLC6P0CF74 106 aa12.32□□□□□ -0.44
CACNB3-201ENST00000301050 RPL27AP46776 148 aaKnown RBP12.32□□□□□ -0.44
CACNB3-201ENST00000301050 ZFP2Q6ZN57 461 aa12.32□□□□□ -0.44
CACNB3-201ENST00000301050 TMEM190Q8WZ59 177 aa12.32□□□□□ -0.44
CACNB3-201ENST00000301050 NBASA2RRP1 2371 aa12.32□□□□□ -0.44
CACNB3-201ENST00000301050 NHLRC4P0CG21 123 aaPredicted RBP12.32□□□□□ -0.44
CACNB3-201ENST00000301050 H3BRN7 92 aa12.31□□□□□ -0.44
CACNB3-201ENST00000301050 LOXP28300 417 aaPredicted RBP12.31□□□□□ -0.44
CACNB3-201ENST00000301050 TEN1Q86WV5 123 aa12.31□□□□□ -0.44
CACNB3-201ENST00000301050 RASL11BQ9BPW5 248 aa12.31□□□□□ -0.44
CACNB3-201ENST00000301050 NCOR2Q9Y618 2525 aa12.31□□□□□ -0.44
CACNB3-201ENST00000301050 LOC107984156A0A0G2JMH3 177 aa12.31□□□□□ -0.44
CACNB3-201ENST00000301050 LINC01549A6NIU2 74 aa12.31□□□□□ -0.44
CACNB3-201ENST00000301050 IGKV1-17P01599 117 aa12.31□□□□□ -0.44
CACNB3-201ENST00000301050 ARL17AQ8IVW1 177 aa12.31□□□□□ -0.44
CACNB3-201ENST00000301050 A0A087WX48 190 aa12.3□□□□□ -0.44
CACNB3-201ENST00000301050 MYMXA0A1B0GTQ4 84 aa12.3□□□□□ -0.44
CACNB3-201ENST00000301050 TMEM95Q3KNT9 176 aa12.3□□□□□ -0.44
CACNB3-201ENST00000301050 ZNF672Q499Z4 452 aaPredicted RBP12.3□□□□□ -0.44
CACNB3-201ENST00000301050 ZNF575Q86XF7 245 aa12.3□□□□□ -0.44
CACNB3-201ENST00000301050 TEX29Q8N6K0 151 aa12.3□□□□□ -0.44
CACNB3-201ENST00000301050 Q8N8P6 123 aa12.3□□□□□ -0.44
CACNB3-201ENST00000301050 IGLV2-18A0A075B6J9 118 aa12.3□□□□□ -0.44
CACNB3-201ENST00000301050 IGHV3-72A0A0B4J1Y9 119 aa12.3□□□□□ -0.44
CACNB3-201ENST00000301050 TRBV7-9A0A0J9YWB2 115 aa12.3□□□□□ -0.44
CACNB3-201ENST00000301050 MRPS12O15235 138 aaKnown RBP12.3□□□□□ -0.44
CACNB3-201ENST00000301050 ENSAO43768 121 aaKnown RBP12.3□□□□□ -0.44
CACNB3-201ENST00000301050 MYOZ3Q8TDC0 251 aa12.3□□□□□ -0.44
CACNB3-201ENST00000301050 COL6A6A6NMZ7 2263 aa12.29□□□□□ -0.44
CACNB3-201ENST00000301050 ZNF80P51504 273 aaPredicted RBP12.29□□□□□ -0.44
CACNB3-201ENST00000301050 IGKV2-40A0A087WW87 121 aaPredicted RBP12.29□□□□□ -0.44
CACNB3-201ENST00000301050 IGKV2D-40P01614 121 aaPredicted RBP12.29□□□□□ -0.44
CACNB3-201ENST00000301050 HERV-K104P63124 156 aa12.29□□□□□ -0.44
CACNB3-201ENST00000301050 PRB3Q04118 309 aaPredicted RBP12.29□□□□□ -0.44
CACNB3-201ENST00000301050 ANKHD1Q8IWZ3 2542 aaKnown RBP12.28□□□□□ -0.44
CACNB3-201ENST00000301050 LY6HO94772 140 aa12.28□□□□□ -0.44
CACNB3-201ENST00000301050 ZNF688P0C7X2 276 aa12.28□□□□□ -0.44
CACNB3-201ENST00000301050 DLX1P56177 255 aa12.28□□□□□ -0.44
CACNB3-201ENST00000301050 KIR2DL4Q99706 377 aa12.28□□□□□ -0.44
CACNB3-201ENST00000301050 CITED1Q99966 193 aa12.28□□□□□ -0.44
CACNB3-201ENST00000301050 SRSF8Q9BRL6 282 aaKnown RBP12.28□□□□□ -0.44
CACNB3-201ENST00000301050 VCX2Q9H322 139 aa12.28□□□□□ -0.44
CACNB3-201ENST00000301050 KAAG1Q9UBP8 84 aa12.28□□□□□ -0.44
CACNB3-201ENST00000301050 LRBAP50851 2863 aa12.28□□□□□ -0.44
CACNB3-201ENST00000301050 PLNP26678 52 aa12.28□□□□□ -0.44
CACNB3-201ENST00000301050 DLX6P56179 175 aa12.28□□□□□ -0.44
CACNB3-201ENST00000301050 PRR25Q96S07 402 aa12.28□□□□□ -0.44
CACNB3-201ENST00000301050 LGALS1P09382 135 aaKnown RBP12.27□□□□□ -0.44
CACNB3-201ENST00000301050 CNTFRP26992 372 aa12.27□□□□□ -0.44
CACNB3-201ENST00000301050 FAM110AQ9BQ89 295 aa12.27□□□□□ -0.44
CACNB3-201ENST00000301050 AAMDCQ9H7C9 122 aa12.27□□□□□ -0.44
CACNB3-201ENST00000301050 I3L2K1 104 aa12.27□□□□□ -0.45
CACNB3-201ENST00000301050 UBE2D3P61077 147 aa12.27□□□□□ -0.45
CACNB3-201ENST00000301050 UBE2D2P62837 147 aa12.27□□□□□ -0.45
CACNB3-201ENST00000301050 PLGLAQ15195 96 aa12.27□□□□□ -0.45
CACNB3-201ENST00000301050 ANXA2RQ3ZCQ2 193 aa12.27□□□□□ -0.45
CACNB3-201ENST00000301050 TMEM155Q4W5P6 130 aa12.27□□□□□ -0.45
CACNB3-201ENST00000301050 COX8CQ7Z4L0 72 aa12.27□□□□□ -0.45
CACNB3-201ENST00000301050 Q8TAT8 98 aa12.27□□□□□ -0.45
CACNB3-201ENST00000301050 PRORYQ9H606 182 aa12.26□□□□□ -0.45
CACNB3-201ENST00000301050 ITPR1Q14643 2758 aa12.26□□□□□ -0.45
CACNB3-201ENST00000301050 UBE2D1P51668 147 aa12.26□□□□□ -0.45
CACNB3-201ENST00000301050 EFNA4P52798 201 aa12.26□□□□□ -0.45
CACNB3-201ENST00000301050 CNFNQ9BYD5 112 aa12.26□□□□□ -0.45
CACNB3-201ENST00000301050 TEX22C9J3V5 150 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms