RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 MFAP4P55083 255 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 XGP55808 180 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 FHL3Q13643 280 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 HLA-DRB4X5D2U9 266 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 LINC01548A6NM66 108 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 TNFRSF13BO14836 293 aaPredicted RBP10.09□□□□□ -0.79
TVP23A-201ENST00000299866 TIMM23O14925 209 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 BSPH1Q075Z2 132 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 IL17RELQ6ZVW7 336 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 ASCL5Q7RTU5 278 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 RNF182Q8N6D2 247 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 TMEM190Q8WZ59 177 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 ZNF48Q96MX3 618 aaPredicted RBP10.09□□□□□ -0.79
TVP23A-201ENST00000299866 DYNLRB1Q9NP97 96 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 LYNX1G3V0Z9 82 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 IGHG4P01861 327 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 LYNX1P0DP58 116 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 C3orf36Q3SXR2 165 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 LINC01559Q495D7 138 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 CFAP126Q5VTH2 177 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 DLX4Q92988 240 aaPredicted RBP10.09□□□□□ -0.79
TVP23A-201ENST00000299866 SMAD5-AS1Q9Y6J3 95 aa10.09□□□□□ -0.79
TVP23A-201ENST00000299866 PLNP26678 52 aa10.08□□□□□ -0.8
TVP23A-201ENST00000299866 SRSF9Q13242 221 aaKnown RBP eCLIP10.08□□□□□ -0.8
TVP23A-201ENST00000299866 HES1Q14469 280 aa10.08□□□□□ -0.8
TVP23A-201ENST00000299866 SCGB1D4Q6XE38 83 aa10.08□□□□□ -0.8
TVP23A-201ENST00000299866 NUP37Q8NFH4 326 aa10.08□□□□□ -0.8
TVP23A-201ENST00000299866 RNF183Q96D59 192 aa10.08□□□□□ -0.8
TVP23A-201ENST00000299866 RAB1BQ9H0U4 201 aa10.08□□□□□ -0.8
TVP23A-201ENST00000299866 KLRD1Q13241 179 aa10.08□□□□□ -0.8
TVP23A-201ENST00000299866 RAXQ9Y2V3 346 aa10.08□□□□□ -0.8
TVP23A-201ENST00000299866 IGHV3-66A0A0C4DH42 116 aa10.08□□□□□ -0.8
TVP23A-201ENST00000299866 H7C1H1 209 aa10.08□□□□□ -0.8
TVP23A-201ENST00000299866 Q6ZUT4 128 aa10.08□□□□□ -0.8
TVP23A-201ENST00000299866 COX8CQ7Z4L0 72 aa10.08□□□□□ -0.8
TVP23A-201ENST00000299866 VKORC1Q9BQB6 163 aa10.08□□□□□ -0.8
TVP23A-201ENST00000299866 CNFNQ9BYD5 112 aa10.08□□□□□ -0.8
TVP23A-201ENST00000299866 CSMD1Q96PZ7 3565 aa10.08□□□□□ -0.8
TVP23A-201ENST00000299866 IGHV3OR16-13A0A075B7E8 117 aa10.07□□□□□ -0.8
TVP23A-201ENST00000299866 IGHV3-74A0A0B4J1X5 117 aa10.07□□□□□ -0.8
TVP23A-201ENST00000299866 IGKV3D-20A0A0C4DH25 116 aa10.07□□□□□ -0.8
TVP23A-201ENST00000299866 CDX4O14627 284 aaPredicted RBP10.07□□□□□ -0.8
TVP23A-201ENST00000299866 LGALS1P09382 135 aaKnown RBP10.07□□□□□ -0.8
TVP23A-201ENST00000299866 TMEM78Q5T7P6 136 aa10.07□□□□□ -0.8
TVP23A-201ENST00000299866 C11orf21Q9P2W6 132 aa10.07□□□□□ -0.8
TVP23A-201ENST00000299866 ONECUT1Q9UBC0 465 aa10.07□□□□□ -0.8
TVP23A-201ENST00000299866 F8VRH5 84 aa10.07□□□□□ -0.8
TVP23A-201ENST00000299866 H3BVH4 76 aa10.07□□□□□ -0.8
TVP23A-201ENST00000299866 SPRY2O43597 315 aa10.07□□□□□ -0.8
TVP23A-201ENST00000299866 NRACQ8N912 160 aa10.07□□□□□ -0.8
TVP23A-201ENST00000299866 SCGB3A1Q96QR1 104 aa10.07□□□□□ -0.8
TVP23A-201ENST00000299866 C21orf62Q9NYP8 219 aa10.07□□□□□ -0.8
TVP23A-201ENST00000299866 CACNA1BQ00975 2339 aa10.06□□□□□ -0.8
TVP23A-201ENST00000299866 ADGRG4Q8IZF6 3080 aa10.06□□□□□ -0.8
TVP23A-201ENST00000299866 Q6ZQT7 251 aa10.06□□□□□ -0.8
TVP23A-201ENST00000299866 FANCD2OSQ96PS1 177 aa10.06□□□□□ -0.8
TVP23A-201ENST00000299866 RALYQ9UKM9 306 aaKnown RBP10.06□□□□□ -0.8
TVP23A-201ENST00000299866 SPANXN1Q5VSR9 72 aa10.06□□□□□ -0.8
TVP23A-201ENST00000299866 ZNF815PA8K554 130 aa10.06□□□□□ -0.8
TVP23A-201ENST00000299866 IGFL2Q6UWQ7 119 aa10.06□□□□□ -0.8
TVP23A-201ENST00000299866 PLEKHB2Q96CS7 222 aa10.06□□□□□ -0.8
TVP23A-201ENST00000299866 TNRC18O15417 2968 aaPredicted RBP10.06□□□□□ -0.8
TVP23A-201ENST00000299866 F8W735 103 aaPredicted RBP10.05□□□□□ -0.8
TVP23A-201ENST00000299866 NBR2O15453 112 aa10.05□□□□□ -0.8
TVP23A-201ENST00000299866 PRADC1Q9BSG0 188 aa10.05□□□□□ -0.8
TVP23A-201ENST00000299866 SS18L2Q9UHA2 77 aa10.05□□□□□ -0.8
TVP23A-201ENST00000299866 PRSS29PA6NIE9 313 aa10.05□□□□□ -0.8
TVP23A-201ENST00000299866 RNASE6Q93091 150 aaKnown RBP10.05□□□□□ -0.8
TVP23A-201ENST00000299866 CARD19Q96LW7 228 aa10.05□□□□□ -0.8
TVP23A-201ENST00000299866 TSPAN13O95857 204 aa10.05□□□□□ -0.8
TVP23A-201ENST00000299866 KLHL30-AS1Q8NEE0 82 aa10.05□□□□□ -0.8
TVP23A-201ENST00000299866 SLC25A16P16260 332 aa10.04□□□□□ -0.8
TVP23A-201ENST00000299866 DEFB104AQ8WTQ1 72 aa10.04□□□□□ -0.8
TVP23A-201ENST00000299866 KAAG1Q9UBP8 84 aa10.04□□□□□ -0.8
TVP23A-201ENST00000299866 ARHGAP32A7KAX9 2087 aa10.04□□□□□ -0.8
TVP23A-201ENST00000299866 J3KRW8 73 aa10.04□□□□□ -0.8
TVP23A-201ENST00000299866 PSMG3-AS1Q96PY0 264 aa10.04□□□□□ -0.8
TVP23A-201ENST00000299866 GVINP1Q7Z2Y8 2422 aa10.04□□□□□ -0.8
TVP23A-201ENST00000299866 IGHV3-49A0A0A0MS15 119 aa10.03□□□□□ -0.8
TVP23A-201ENST00000299866 ATP6V0E2Q8NHE4 81 aa10.03□□□□□ -0.8
TVP23A-201ENST00000299866 KIR2DL4Q99706 377 aa10.03□□□□□ -0.8
TVP23A-201ENST00000299866 SRSF8Q9BRL6 282 aaKnown RBP10.03□□□□□ -0.8
TVP23A-201ENST00000299866 ANAPC13Q9BS18 74 aa10.03□□□□□ -0.8
TVP23A-201ENST00000299866 IGLV11-55A0A075B6I3 123 aa10.03□□□□□ -0.8
TVP23A-201ENST00000299866 A6NJY4 79 aa10.03□□□□□ -0.8
TVP23A-201ENST00000299866 SRSF2Q01130 221 aaKnown RBP10.03□□□□□ -0.8
TVP23A-201ENST00000299866 PPDPFLQ8WWR9 84 aa10.03□□□□□ -0.8
TVP23A-201ENST00000299866 CACNA1HO95180 2353 aa10.02□□□□□ -0.8
TVP23A-201ENST00000299866 EMP1P54849 157 aa10.02□□□□□ -0.81
TVP23A-201ENST00000299866 AGPAT4-IT1Q9H0P7 198 aa10.02□□□□□ -0.81
TVP23A-201ENST00000299866 SMIM2Q9BVW6 85 aa10.02□□□□□ -0.81
TVP23A-201ENST00000299866 CTSGP08311 255 aa10.01□□□□□ -0.81
TVP23A-201ENST00000299866 SCGB1C2P0DMR2 95 aa10.01□□□□□ -0.81
TVP23A-201ENST00000299866 NDPQ00604 133 aa10.01□□□□□ -0.81
TVP23A-201ENST00000299866 ERG28Q9UKR5 140 aa10.01□□□□□ -0.81
TVP23A-201ENST00000299866 TCL1BO95988 128 aa10.01□□□□□ -0.81
TVP23A-201ENST00000299866 HIF1ANQ9NWT6 349 aa10.01□□□□□ -0.81
TVP23A-201ENST00000299866 MGAQ8IWI9 3026 aa10.01□□□□□ -0.81
TVP23A-201ENST00000299866 TRAV12-1A0A0B4J245 112 aa10.01□□□□□ -0.81
TVP23A-201ENST00000299866 ANXA2RQ3ZCQ2 193 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms