RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 DAZ1Q9NQZ3 744 aaKnown RBP10.89□□□□□ -0.67
C9orf3-202ENST00000297979 ITPR2Q14571 2701 aa10.89□□□□□ -0.67
C9orf3-202ENST00000297979 TRGC1P0CF51 173 aa10.89□□□□□ -0.67
C9orf3-202ENST00000297979 SMAGPQ0VAQ4 97 aa10.89□□□□□ -0.67
C9orf3-202ENST00000297979 FAM106AQ4KMX7 169 aa10.89□□□□□ -0.67
C9orf3-202ENST00000297979 LCN12Q6JVE5 192 aa10.89□□□□□ -0.67
C9orf3-202ENST00000297979 C8orf86Q6ZUL3 223 aa10.89□□□□□ -0.67
C9orf3-202ENST00000297979 GBGT1Q8N5D6 347 aa10.89□□□□□ -0.67
C9orf3-202ENST00000297979 P01737 135 aa10.88□□□□□ -0.67
C9orf3-202ENST00000297979 Q71RC1 249 aaPredicted RBP10.88□□□□□ -0.67
C9orf3-202ENST00000297979 GPHB5Q86YW7 130 aa10.88□□□□□ -0.67
C9orf3-202ENST00000297979 RPP21Q9H633 154 aaKnown RBP10.88□□□□□ -0.67
C9orf3-202ENST00000297979 LGALS1P09382 135 aaKnown RBP10.88□□□□□ -0.67
C9orf3-202ENST00000297979 UBE2E2Q96LR5 201 aa10.88□□□□□ -0.67
C9orf3-202ENST00000297979 IGHV7-4-1A0A0J9YVY3 117 aa10.87□□□□□ -0.67
C9orf3-202ENST00000297979 ZNF705FA8MVS1 300 aaPredicted RBP10.87□□□□□ -0.67
C9orf3-202ENST00000297979 RNF182Q8N6D2 247 aa10.87□□□□□ -0.67
C9orf3-202ENST00000297979 PTH2Q96A98 100 aa10.87□□□□□ -0.67
C9orf3-202ENST00000297979 ZC2HC1AQ96GY0 325 aa10.87□□□□□ -0.67
C9orf3-202ENST00000297979 TRAV8-2A0A0B4J237 113 aa10.87□□□□□ -0.67
C9orf3-202ENST00000297979 FAM181BA6NEQ2 426 aa10.87□□□□□ -0.67
C9orf3-202ENST00000297979 K7EMT4 169 aa10.87□□□□□ -0.67
C9orf3-202ENST00000297979 CT83Q5H943 113 aa10.87□□□□□ -0.67
C9orf3-202ENST00000297979 TSKUQ8WUA8 353 aa10.87□□□□□ -0.67
C9orf3-202ENST00000297979 MRPL53Q96EL3 112 aaKnown RBP10.87□□□□□ -0.67
C9orf3-202ENST00000297979 TRAPPC1Q9Y5R8 145 aa10.87□□□□□ -0.67
C9orf3-202ENST00000297979 KIR2DL5BA0A0G2JN68 375 aa10.86□□□□□ -0.67
C9orf3-202ENST00000297979 KIR2DL5BA0A0G2JPC4 375 aa10.86□□□□□ -0.67
C9orf3-202ENST00000297979 KIR2DL5AQ8N109 375 aa10.86□□□□□ -0.67
C9orf3-202ENST00000297979 HIST1H2BLQ99880 126 aa10.86□□□□□ -0.67
C9orf3-202ENST00000297979 TLN2Q9Y4G6 2542 aa10.86□□□□□ -0.67
C9orf3-202ENST00000297979 IZUMO1RA6ND01 250 aa10.86□□□□□ -0.67
C9orf3-202ENST00000297979 EDN2P20800 178 aa10.86□□□□□ -0.67
C9orf3-202ENST00000297979 ZNF738Q8NE65 137 aa10.86□□□□□ -0.67
C9orf3-202ENST00000297979 C1orf43Q9BWL3 253 aa10.86□□□□□ -0.67
C9orf3-202ENST00000297979 NPIPB6E9PJ23 425 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 KLHDC1Q8N7A1 406 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 OR4B1Q8NGF8 309 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 RAX2Q96IS3 184 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 VGLL1Q99990 258 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 RHPN1-AS1Q9BWJ2 59 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 ESM1Q9NQ30 184 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 NAT8BQ9UHF3 227 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 AKAP9Q99996 3911 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 RBAKDNA6NC62 111 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 CT45A10P0DMU9 189 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 SEC61GP60059 68 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 TCTEX1D4Q5JR98 221 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 Q6ZSV7 163 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 C16orf92Q96LL3 132 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 C8orf49Q96NF6 230 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 MCRIP2Q9BUT9 160 aaKnown RBP10.85□□□□□ -0.67
C9orf3-202ENST00000297979 A8MWL6 223 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 SPINK4O60575 86 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 MTURNQ8N3F0 131 aa10.85□□□□□ -0.67
C9orf3-202ENST00000297979 PRAC2D3DTV9 90 aa10.84□□□□□ -0.67
C9orf3-202ENST00000297979 G3V4G9 280 aa10.84□□□□□ -0.67
C9orf3-202ENST00000297979 CBLN1P23435 193 aa10.84□□□□□ -0.67
C9orf3-202ENST00000297979 Q8TAT8 98 aa10.84□□□□□ -0.67
C9orf3-202ENST00000297979 PRR25Q96S07 402 aa10.84□□□□□ -0.67
C9orf3-202ENST00000297979 COX11Q9Y6N1 276 aa10.84□□□□□ -0.67
C9orf3-202ENST00000297979 A0A1W2PRX2 142 aa10.84□□□□□ -0.67
C9orf3-202ENST00000297979 COX8CQ7Z4L0 72 aa10.84□□□□□ -0.67
C9orf3-202ENST00000297979 NUP35Q8NFH5 326 aa10.84□□□□□ -0.67
C9orf3-202ENST00000297979 IGHV4OR15-8A0A075B7B6 117 aa10.83□□□□□ -0.68
C9orf3-202ENST00000297979 A0A087WW49 117 aa10.83□□□□□ -0.68
C9orf3-202ENST00000297979 HIGD1CA8MV81 97 aa10.83□□□□□ -0.68
C9orf3-202ENST00000297979 MRPL54Q6P161 138 aaKnown RBP10.83□□□□□ -0.68
C9orf3-202ENST00000297979 GTSF1LQ9H1H1 148 aa10.83□□□□□ -0.68
C9orf3-202ENST00000297979 FASNP49327 2511 aaKnown RBP10.83□□□□□ -0.68
C9orf3-202ENST00000297979 FRMD6-AS1P0C7T7 363 aa10.83□□□□□ -0.68
C9orf3-202ENST00000297979 CRIP1P50238 77 aa10.83□□□□□ -0.68
C9orf3-202ENST00000297979 RPL11P62913 178 aaKnown RBP10.83□□□□□ -0.68
C9orf3-202ENST00000297979 Q6ZVH6 145 aa10.83□□□□□ -0.68
C9orf3-202ENST00000297979 NDFIP1Q9BT67 221 aa10.83□□□□□ -0.68
C9orf3-202ENST00000297979 GNB1LQ9BYB4 327 aa10.83□□□□□ -0.68
C9orf3-202ENST00000297979 GFRA4Q9GZZ7 299 aa10.83□□□□□ -0.68
C9orf3-202ENST00000297979 NRN1Q9NPD7 142 aa10.83□□□□□ -0.68
C9orf3-202ENST00000297979 CSDC2Q9Y534 153 aaKnown RBP10.83□□□□□ -0.68
C9orf3-202ENST00000297979 SONP18583 2426 aaKnown RBP10.83□□□□□ -0.68
C9orf3-202ENST00000297979 SNURFLB1AK76 121 aa10.82□□□□□ -0.68
C9orf3-202ENST00000297979 SOCS3O14543 225 aa10.82□□□□□ -0.68
C9orf3-202ENST00000297979 ERCC8Q13216 396 aa10.82□□□□□ -0.68
C9orf3-202ENST00000297979 STPG4Q8N801 248 aa10.82□□□□□ -0.68
C9orf3-202ENST00000297979 TMEM213A2RRL7 107 aa10.82□□□□□ -0.68
C9orf3-202ENST00000297979 MRPL18Q9H0U6 180 aaKnown RBP10.82□□□□□ -0.68
C9orf3-202ENST00000297979 FAM231BA6NCW3 169 aa10.81□□□□□ -0.68
C9orf3-202ENST00000297979 LGALS9O00182 355 aa10.81□□□□□ -0.68
C9orf3-202ENST00000297979 MT-ND6P03923 174 aa10.81□□□□□ -0.68
C9orf3-202ENST00000297979 HOXD3P31249 432 aaPredicted RBP10.81□□□□□ -0.68
C9orf3-202ENST00000297979 PPDPFQ9H3Y8 114 aa10.81□□□□□ -0.68
C9orf3-202ENST00000297979 HECTD1Q9ULT8 2610 aa10.81□□□□□ -0.68
C9orf3-202ENST00000297979 SRD5A1P18405 259 aa10.81□□□□□ -0.68
C9orf3-202ENST00000297979 SYNJ2BPP57105 145 aa10.81□□□□□ -0.68
C9orf3-202ENST00000297979 FAM162BQ5T6X4 162 aa10.81□□□□□ -0.68
C9orf3-202ENST00000297979 RASL11AQ6T310 242 aa10.81□□□□□ -0.68
C9orf3-202ENST00000297979 GTSF1Q8WW33 167 aa10.81□□□□□ -0.68
C9orf3-202ENST00000297979 MRAP2Q96G30 205 aa10.81□□□□□ -0.68
C9orf3-202ENST00000297979 C20orf173Q96LM9 149 aa10.81□□□□□ -0.68
C9orf3-202ENST00000297979 SMR3AQ99954 134 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms