RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 AGPAT4-IT1Q9H0P7 198 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 LOC102724200A0A096LPH7 203 aaPredicted RBP7.18□□□□□ -1.26
PRDM9-201ENST00000296682 FAM181BA6NEQ2 426 aa7.18□□□□□ -1.26
PRDM9-201ENST00000296682 H3BVH4 76 aa7.18□□□□□ -1.26
PRDM9-201ENST00000296682 HAX1O00165 279 aa7.18□□□□□ -1.26
PRDM9-201ENST00000296682 EDN2P20800 178 aa7.18□□□□□ -1.26
PRDM9-201ENST00000296682 FOXE3Q13461 319 aa7.18□□□□□ -1.26
PRDM9-201ENST00000296682 EBLN2Q6P2I7 272 aa7.18□□□□□ -1.26
PRDM9-201ENST00000296682 Q8N6K4 173 aa7.18□□□□□ -1.26
PRDM9-201ENST00000296682 A0A1W2PRX2 142 aa7.18□□□□□ -1.26
PRDM9-201ENST00000296682 C20orf202A1L168 122 aa7.18□□□□□ -1.26
PRDM9-201ENST00000296682 OR4C46A6NHA9 309 aa7.18□□□□□ -1.26
PRDM9-201ENST00000296682 ZNF688P0C7X2 276 aa7.18□□□□□ -1.26
PRDM9-201ENST00000296682 FAM106AQ4KMX7 169 aa7.18□□□□□ -1.26
PRDM9-201ENST00000296682 GATD1Q8NB37 220 aa7.18□□□□□ -1.26
PRDM9-201ENST00000296682 VPS13CQ709C8 3753 aa7.18□□□□□ -1.26
PRDM9-201ENST00000296682 TRAV26-2A0A0B4J265 109 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 C19orf71A6NCJ1 209 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 F5H697 171 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 CYB5R2Q6BCY4 276 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 COX8CQ7Z4L0 72 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 TMEM70Q9BUB7 260 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 RHPN1-AS1Q9BWJ2 59 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 MAP1LC3CQ9BXW4 147 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 NPFFR1Q9GZQ6 430 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 PRSS1P07477 247 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 EBI3Q14213 229 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 C1orf194Q5T5A4 169 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 CFAP161Q6P656 301 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 OR10J6PQ8NGY7 276 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 AGRNO00468 2067 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 NF1P21359 2839 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 TCAPO15273 167 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 ZNF25P17030 456 aaPredicted RBP7.17□□□□□ -1.26
PRDM9-201ENST00000296682 KIR3DS1Q14943 382 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 DEFB136Q30KP8 78 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 PRSS57Q6UWY2 283 aa7.17□□□□□ -1.26
PRDM9-201ENST00000296682 SNHG12Q9BXW3 62 aa7.16□□□□□ -1.26
PRDM9-201ENST00000296682 TRBV7-1A0A0A6YYK4 115 aa7.16□□□□□ -1.26
PRDM9-201ENST00000296682 SYNJ2BPP57105 145 aa7.16□□□□□ -1.26
PRDM9-201ENST00000296682 LYPD1Q8N2G4 141 aa7.16□□□□□ -1.26
PRDM9-201ENST00000296682 PRSS22Q9GZN4 317 aa7.16□□□□□ -1.26
PRDM9-201ENST00000296682 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.16□□□□□ -1.26
PRDM9-201ENST00000296682 Q6ZVH6 145 aa7.16□□□□□ -1.26
PRDM9-201ENST00000296682 ATP5L2Q7Z4Y8 100 aa7.16□□□□□ -1.26
PRDM9-201ENST00000296682 ZNF492Q9P255 531 aa7.16□□□□□ -1.26
PRDM9-201ENST00000296682 IGHV1-24A0A0C4DH33 117 aa7.15□□□□□ -1.26
PRDM9-201ENST00000296682 LOXL1Q08397 574 aaPredicted RBP7.15□□□□□ -1.26
PRDM9-201ENST00000296682 FAM74A4Q5TZK3 123 aa7.15□□□□□ -1.26
PRDM9-201ENST00000296682 NPIPB6E9PJ23 425 aa7.15□□□□□ -1.26
PRDM9-201ENST00000296682 RAB9AP51151 201 aa7.15□□□□□ -1.26
PRDM9-201ENST00000296682 PDE6HQ13956 83 aa7.15□□□□□ -1.26
PRDM9-201ENST00000296682 ORMDL3Q8N138 153 aa7.15□□□□□ -1.26
PRDM9-201ENST00000296682 KLHDC1Q8N7A1 406 aa7.15□□□□□ -1.26
PRDM9-201ENST00000296682 OR10AG1Q8NH19 301 aa7.15□□□□□ -1.26
PRDM9-201ENST00000296682 FBN2P35556 2912 aa7.15□□□□□ -1.27
PRDM9-201ENST00000296682 GAS8-AS1O95177 125 aa7.15□□□□□ -1.27
PRDM9-201ENST00000296682 MRPL52Q86TS9 123 aaKnown RBP7.15□□□□□ -1.27
PRDM9-201ENST00000296682 AJUBAQ96IF1 538 aa7.15□□□□□ -1.27
PRDM9-201ENST00000296682 Q96MF0 132 aa7.15□□□□□ -1.27
PRDM9-201ENST00000296682 MRPS12O15235 138 aaKnown RBP7.14□□□□□ -1.27
PRDM9-201ENST00000296682 RPLP1P05386 114 aaKnown RBP7.14□□□□□ -1.27
PRDM9-201ENST00000296682 LBHQ53QV2 105 aaPredicted RBP7.14□□□□□ -1.27
PRDM9-201ENST00000296682 CT83Q5H943 113 aa7.14□□□□□ -1.27
PRDM9-201ENST00000296682 PSMG4Q5JS54 123 aa7.14□□□□□ -1.27
PRDM9-201ENST00000296682 Q5PR19 223 aa7.14□□□□□ -1.27
PRDM9-201ENST00000296682 PIFOQ8TCI5 191 aa7.14□□□□□ -1.27
PRDM9-201ENST00000296682 PHLDA3Q9Y5J5 127 aa7.14□□□□□ -1.27
PRDM9-201ENST00000296682 TRAV12-2A0A075B6T6 113 aa7.14□□□□□ -1.27
PRDM9-201ENST00000296682 PCP4P48539 62 aa7.14□□□□□ -1.27
PRDM9-201ENST00000296682 ANKRD39Q53RE8 183 aa7.14□□□□□ -1.27
PRDM9-201ENST00000296682 DPF1Q92782 380 aa7.14□□□□□ -1.27
PRDM9-201ENST00000296682 MIEN1Q9BRT3 115 aa7.14□□□□□ -1.27
PRDM9-201ENST00000296682 TMEM191AQ9H0A3 160 aa7.14□□□□□ -1.27
PRDM9-201ENST00000296682 NPYP01303 97 aa7.14□□□□□ -1.27
PRDM9-201ENST00000296682 NMUP48645 174 aa7.14□□□□□ -1.27
PRDM9-201ENST00000296682 MRPL51Q4U2R6 128 aaKnown RBP7.14□□□□□ -1.27
PRDM9-201ENST00000296682 HOXA3O43365 443 aaPredicted RBP7.13□□□□□ -1.27
PRDM9-201ENST00000296682 LINC01356Q8N9X3 169 aa7.13□□□□□ -1.27
PRDM9-201ENST00000296682 SLC50A1Q9BRV3 221 aa7.13□□□□□ -1.27
PRDM9-201ENST00000296682 ZFAND3Q9H8U3 227 aa7.13□□□□□ -1.27
PRDM9-201ENST00000296682 TRAV12-3A0A0B4J271 114 aa7.13□□□□□ -1.27
PRDM9-201ENST00000296682 A0A1B0GXF2 115 aa7.13□□□□□ -1.27
PRDM9-201ENST00000296682 C14orf178Q8N769 122 aaPredicted RBP7.13□□□□□ -1.27
PRDM9-201ENST00000296682 A0A0G2JLM5 398 aa7.13□□□□□ -1.27
PRDM9-201ENST00000296682 NDUFS8O00217 210 aa7.13□□□□□ -1.27
PRDM9-201ENST00000296682 GNRH2O43555 120 aa7.13□□□□□ -1.27
PRDM9-201ENST00000296682 IGLL1P15814 213 aa7.13□□□□□ -1.27
PRDM9-201ENST00000296682 CACNG7P62955 275 aa7.13□□□□□ -1.27
PRDM9-201ENST00000296682 KLF5Q13887 457 aaPredicted RBP7.13□□□□□ -1.27
PRDM9-201ENST00000296682 STPG4Q8N801 248 aa7.13□□□□□ -1.27
PRDM9-201ENST00000296682 HSPB8Q9UJY1 196 aa7.13□□□□□ -1.27
PRDM9-201ENST00000296682 ZFHX3Q15911 3703 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 IGHV3OR16-12A0A075B7B8 117 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 KIR2DL5BA0A0G2JN68 375 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 KIR2DL5BA0A0G2JPC4 375 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 CLPSL1A2RUU4 121 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 FAM231BA6NCW3 169 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 SYS1-DBNDD2H3BUS1 97 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 KIR2DL5AQ8N109 375 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms