RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 NHP2Q9NX24 153 aaKnown RBP7.87□□□□□ -1.15
CCDC36-201ENST00000296449 DCHS2Q6V1P9 2916 aa7.87□□□□□ -1.15
CCDC36-201ENST00000296449 RBAKDNA6NC62 111 aa7.87□□□□□ -1.15
CCDC36-201ENST00000296449 NCBP2LA6PVI3 153 aaKnown RBP7.87□□□□□ -1.15
CCDC36-201ENST00000296449 IL17RELQ6ZVW7 336 aa7.87□□□□□ -1.15
CCDC36-201ENST00000296449 TRAV40A0A0B4J280 105 aa7.86□□□□□ -1.15
CCDC36-201ENST00000296449 IGKV3D-20A0A0C4DH25 116 aa7.86□□□□□ -1.15
CCDC36-201ENST00000296449 E9PLD3 99 aa7.86□□□□□ -1.15
CCDC36-201ENST00000296449 K7EMI3 77 aa7.86□□□□□ -1.15
CCDC36-201ENST00000296449 TRGV3P03979 118 aa7.86□□□□□ -1.15
CCDC36-201ENST00000296449 RNF182Q8N6D2 247 aa7.86□□□□□ -1.15
CCDC36-201ENST00000296449 TMEM160Q9NX00 188 aa7.86□□□□□ -1.15
CCDC36-201ENST00000296449 MRPL35Q9NZE8 188 aaKnown RBP7.86□□□□□ -1.15
CCDC36-201ENST00000296449 C11orf21Q9P2W6 132 aa7.86□□□□□ -1.15
CCDC36-201ENST00000296449 LY6HO94772 140 aa7.86□□□□□ -1.15
CCDC36-201ENST00000296449 SCGB1A1P11684 91 aa7.86□□□□□ -1.15
CCDC36-201ENST00000296449 MAPKAPK5-AS1Q8N8E1 139 aa7.86□□□□□ -1.15
CCDC36-201ENST00000296449 WNK2Q9Y3S1 2297 aa7.86□□□□□ -1.15
CCDC36-201ENST00000296449 LRBAP50851 2863 aa7.86□□□□□ -1.15
CCDC36-201ENST00000296449 RAB9AP51151 201 aa7.85□□□□□ -1.15
CCDC36-201ENST00000296449 PRR30Q53SZ7 412 aaPredicted RBP7.85□□□□□ -1.15
CCDC36-201ENST00000296449 Q8N6K4 173 aa7.85□□□□□ -1.15
CCDC36-201ENST00000296449 LINC01560Q8TB33 94 aa7.85□□□□□ -1.15
CCDC36-201ENST00000296449 F8W1H4 67 aa7.85□□□□□ -1.15
CCDC36-201ENST00000296449 PF4V1P10720 104 aa7.85□□□□□ -1.15
CCDC36-201ENST00000296449 NRACQ8N912 160 aa7.85□□□□□ -1.15
CCDC36-201ENST00000296449 TRAV26-2A0A0B4J265 109 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 BUB3O43684 328 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 PRTN3P24158 256 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 FOXI2Q6ZQN5 318 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 IGHV7-81A0A0B4J1V7 117 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 IGLL5B9A064 214 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 LINC01619G3V211 115 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 M0R1W7 72 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 LAGE3Q14657 143 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 SAMD13Q5VXD3 122 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 MYOZ3Q8TDC0 251 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 SLC50A1Q9BRV3 221 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 AGPAT4-IT1Q9H0P7 198 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 ZFAND3Q9H8U3 227 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 ABCA4P78363 2273 aa7.84□□□□□ -1.15
CCDC36-201ENST00000296449 A0A087WX48 190 aa7.83□□□□□ -1.16
CCDC36-201ENST00000296449 IGHV7-4-1A0A0J9YVY3 117 aa7.83□□□□□ -1.16
CCDC36-201ENST00000296449 IGHV3-66A0A0C4DH42 116 aa7.83□□□□□ -1.16
CCDC36-201ENST00000296449 J3QR89 54 aa7.83□□□□□ -1.16
CCDC36-201ENST00000296449 PLNP26678 52 aa7.83□□□□□ -1.16
CCDC36-201ENST00000296449 EBI3Q14213 229 aa7.83□□□□□ -1.16
CCDC36-201ENST00000296449 CCDC144NLQ6NUI1 221 aa7.83□□□□□ -1.16
CCDC36-201ENST00000296449 VMO1Q7Z5L0 202 aa7.83□□□□□ -1.16
CCDC36-201ENST00000296449 ZNF502Q8TBZ5 544 aa7.83□□□□□ -1.16
CCDC36-201ENST00000296449 SPANXB1Q9NS25 103 aaPredicted RBP7.83□□□□□ -1.16
CCDC36-201ENST00000296449 IGHV4-4A0A075B6R2 117 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 ZNF207O43670 478 aaKnown RBP7.82□□□□□ -1.16
CCDC36-201ENST00000296449 EFNA4P52798 201 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 WFDC2Q14508 124 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 KLK9Q2XQG4 91 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 C15orf32Q32M92 178 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 C12orf74Q32Q52 190 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 ZNF479Q96JC4 524 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 KLK9Q9UKQ9 250 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 UFC1Q9Y3C8 167 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 ANKHD1Q8IWZ3 2542 aaKnown RBP7.82□□□□□ -1.16
CCDC36-201ENST00000296449 CEP295Q9C0D2 2601 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 TRAV12-1A0A0B4J245 112 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 CLPSL1A2RUU4 121 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 OOSP1A8MZH6 123 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 CLEC3BP05452 202 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 Q6ZQT7 251 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 SIGMAR1Q99720 223 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 AGRNO00468 2067 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 IGHV3OR16-13A0A075B7E8 117 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 IGHV3-74A0A0B4J1X5 117 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 TRAV8-2A0A0B4J237 113 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 A0A1B0GWB2 263 aa7.82□□□□□ -1.16
CCDC36-201ENST00000296449 GRNP28799 593 aaKnown RBP7.82□□□□□ -1.16
CCDC36-201ENST00000296449 CD300EQ496F6 205 aaPredicted RBP7.82□□□□□ -1.16
CCDC36-201ENST00000296449 MRPL53Q96EL3 112 aaKnown RBP7.82□□□□□ -1.16
CCDC36-201ENST00000296449 SPTBN4Q9H254 2564 aa7.81□□□□□ -1.16
CCDC36-201ENST00000296449 H3BMG7 143 aa7.81□□□□□ -1.16
CCDC36-201ENST00000296449 AZU1P20160 251 aa7.81□□□□□ -1.16
CCDC36-201ENST00000296449 Q8N9W7 124 aa7.81□□□□□ -1.16
CCDC36-201ENST00000296449 GTSF1LQ9H1H1 148 aa7.81□□□□□ -1.16
CCDC36-201ENST00000296449 HIF1ANQ9NWT6 349 aa7.81□□□□□ -1.16
CCDC36-201ENST00000296449 TRBV7-3A0A075B6L6 115 aa7.81□□□□□ -1.16
CCDC36-201ENST00000296449 TCF15Q12870 199 aa7.81□□□□□ -1.16
CCDC36-201ENST00000296449 TMEM78Q5T7P6 136 aa7.81□□□□□ -1.16
CCDC36-201ENST00000296449 FAM110DQ8TAY7 271 aaPredicted RBP7.81□□□□□ -1.16
CCDC36-201ENST00000296449 TIMD4Q96H15 378 aa7.81□□□□□ -1.16
CCDC36-201ENST00000296449 HIST1H4GQ99525 98 aa7.81□□□□□ -1.16
CCDC36-201ENST00000296449 SPATA25Q9BR10 227 aa7.81□□□□□ -1.16
CCDC36-201ENST00000296449 MSRB2Q9Y3D2 182 aa7.81□□□□□ -1.16
CCDC36-201ENST00000296449 F8VRH5 84 aa7.8□□□□□ -1.16
CCDC36-201ENST00000296449 RRN3P1Q2M238 152 aa7.8□□□□□ -1.16
CCDC36-201ENST00000296449 MRAP2Q96G30 205 aa7.8□□□□□ -1.16
CCDC36-201ENST00000296449 VKORC1Q9BQB6 163 aa7.8□□□□□ -1.16
CCDC36-201ENST00000296449 TSSC4Q9Y5U2 329 aaPredicted RBP7.8□□□□□ -1.16
CCDC36-201ENST00000296449 SVEP1Q4LDE5 3571 aa7.8□□□□□ -1.16
CCDC36-201ENST00000296449 IGHV3-49A0A0A0MS15 119 aa7.8□□□□□ -1.16
CCDC36-201ENST00000296449 GAGE12HA6NDE8 117 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms