RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 TM4SF20Q53R12 229 aa6.96□□□□□ -1.3
PDPN-201ENST00000294489 C10orf99Q6UWK7 81 aa6.96□□□□□ -1.3
PDPN-201ENST00000294489 C9orf47Q6ZRZ4 202 aa6.96□□□□□ -1.3
PDPN-201ENST00000294489 ZNF738Q8NE65 137 aa6.96□□□□□ -1.3
PDPN-201ENST00000294489 UFC1Q9Y3C8 167 aa6.96□□□□□ -1.3
PDPN-201ENST00000294489 UBE2E2Q96LR5 201 aa6.95□□□□□ -1.3
PDPN-201ENST00000294489 LOC102724200A0A096LPH7 203 aaPredicted RBP6.95□□□□□ -1.3
PDPN-201ENST00000294489 ZNF324O75467 553 aaPredicted RBP6.95□□□□□ -1.3
PDPN-201ENST00000294489 LYZL1Q6UWQ5 148 aa6.95□□□□□ -1.3
PDPN-201ENST00000294489 ESM1Q9NQ30 184 aa6.95□□□□□ -1.3
PDPN-201ENST00000294489 YAE1D1Q9NRH1 226 aa6.95□□□□□ -1.3
PDPN-201ENST00000294489 SMPXQ9UHP9 88 aa6.95□□□□□ -1.3
PDPN-201ENST00000294489 ITPR2Q14571 2701 aa6.95□□□□□ -1.3
PDPN-201ENST00000294489 HSBP1O75506 76 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 RPLP1P05386 114 aaKnown RBP6.94□□□□□ -1.3
PDPN-201ENST00000294489 PMCHP20382 165 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 FER1L6-AS1Q8NA97 138 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 CLUHP3Q96NS8 147 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 TSTD3H0UI37 97 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 OVOL1O14753 267 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 LGALS1P09382 135 aaKnown RBP6.94□□□□□ -1.3
PDPN-201ENST00000294489 HIST1H1AQ02539 215 aaPredicted RBP6.94□□□□□ -1.3
PDPN-201ENST00000294489 SAMD13Q5VXD3 122 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 Q6ZWC4 215 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 REC114Q7Z4M0 266 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 GATD1Q8NB37 220 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 OR10J6PQ8NGY7 276 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 LINC00477Q96M19 166 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 LENEPQ9Y5L5 61 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 SCGB2A2Q13296 93 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 WFDC12Q8WWY7 111 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 C16orf95Q9H693 158 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 NAGKQ9UJ70 344 aa6.94□□□□□ -1.3
PDPN-201ENST00000294489 LGALS9O00182 355 aa6.93□□□□□ -1.3
PDPN-201ENST00000294489 SOCS3O14543 225 aa6.93□□□□□ -1.3
PDPN-201ENST00000294489 RNASE1P07998 156 aaKnown RBP6.93□□□□□ -1.3
PDPN-201ENST00000294489 NTF3P20783 257 aa6.93□□□□□ -1.3
PDPN-201ENST00000294489 PKIAP61925 76 aa6.93□□□□□ -1.3
PDPN-201ENST00000294489 LINC01559Q495D7 138 aa6.93□□□□□ -1.3
PDPN-201ENST00000294489 PRR31Q5SQ13 230 aa6.93□□□□□ -1.3
PDPN-201ENST00000294489 RNASEKQ6P5S7 137 aaKnown RBP6.93□□□□□ -1.3
PDPN-201ENST00000294489 Q6ZSV7 163 aa6.93□□□□□ -1.3
PDPN-201ENST00000294489 C20orf173Q96LM9 149 aa6.93□□□□□ -1.3
PDPN-201ENST00000294489 IGKV3-7A0A075B6H7 116 aa6.93□□□□□ -1.3
PDPN-201ENST00000294489 CTRLP40313 264 aa6.93□□□□□ -1.3
PDPN-201ENST00000294489 ZNF493Q6ZR52 646 aa6.93□□□□□ -1.3
PDPN-201ENST00000294489 IGLC6P0CF74 106 aa6.92□□□□□ -1.3
PDPN-201ENST00000294489 ZNF705DP0CH99 300 aaPredicted RBP6.92□□□□□ -1.3
PDPN-201ENST00000294489 ZNF705BP0CI00 300 aaPredicted RBP6.92□□□□□ -1.3
PDPN-201ENST00000294489 ID1P41134 155 aa6.92□□□□□ -1.3
PDPN-201ENST00000294489 TWIST1Q15672 202 aa6.92□□□□□ -1.3
PDPN-201ENST00000294489 NIT1Q86X76 327 aa6.92□□□□□ -1.3
PDPN-201ENST00000294489 FAM19A2Q8N3H0 131 aa6.92□□□□□ -1.3
PDPN-201ENST00000294489 DUX5Q96PT3 197 aa6.92□□□□□ -1.3
PDPN-201ENST00000294489 FLNAP21333 2647 aaKnown RBP6.92□□□□□ -1.3
PDPN-201ENST00000294489 KRTDAPP60985 99 aa6.92□□□□□ -1.3
PDPN-201ENST00000294489 TCTEX1D4Q5JR98 221 aa6.92□□□□□ -1.3
PDPN-201ENST00000294489 CHCHD1Q96BP2 118 aaKnown RBP6.92□□□□□ -1.3
PDPN-201ENST00000294489 TMEM213A2RRL7 107 aa6.91□□□□□ -1.3
PDPN-201ENST00000294489 FAM181BA6NEQ2 426 aa6.91□□□□□ -1.3
PDPN-201ENST00000294489 M0R2Z0 102 aa6.91□□□□□ -1.3
PDPN-201ENST00000294489 CD33P20138 364 aa6.91□□□□□ -1.3
PDPN-201ENST00000294489 DMRTA1Q5VZB9 504 aa6.91□□□□□ -1.3
PDPN-201ENST00000294489 TCAPO15273 167 aa6.91□□□□□ -1.3
PDPN-201ENST00000294489 HILS1P60008 231 aa6.91□□□□□ -1.3
PDPN-201ENST00000294489 DEFA6Q01524 100 aa6.91□□□□□ -1.3
PDPN-201ENST00000294489 FAM104BQ5XKR9 115 aa6.91□□□□□ -1.3
PDPN-201ENST00000294489 KLHDC1Q8N7A1 406 aa6.91□□□□□ -1.3
PDPN-201ENST00000294489 C4orf3Q8WVX3 66 aa6.91□□□□□ -1.3
PDPN-201ENST00000294489 IGKV3D-20A0A0C4DH25 116 aa6.9□□□□□ -1.3
PDPN-201ENST00000294489 MUC21A0A0G2JKD1 596 aa6.9□□□□□ -1.3
PDPN-201ENST00000294489 MUC21A0A140T8X8 626 aa6.9□□□□□ -1.3
PDPN-201ENST00000294489 LY6G6DO95868 133 aa6.9□□□□□ -1.3
PDPN-201ENST00000294489 LINC00614P0C842 121 aa6.9□□□□□ -1.3
PDPN-201ENST00000294489 MUC21Q5SSG8 566 aa6.9□□□□□ -1.3
PDPN-201ENST00000294489 OR8A1Q8NGG7 326 aa6.9□□□□□ -1.3
PDPN-201ENST00000294489 CNFNQ9BYD5 112 aa6.9□□□□□ -1.3
PDPN-201ENST00000294489 PRO1933Q9H354 126 aa6.9□□□□□ -1.3
PDPN-201ENST00000294489 SRD5A1P18405 259 aa6.9□□□□□ -1.3
PDPN-201ENST00000294489 SYNJ2BPP57105 145 aa6.9□□□□□ -1.3
PDPN-201ENST00000294489 ZNF664Q8N3J9 261 aa6.9□□□□□ -1.3
PDPN-201ENST00000294489 IGHV4OR15-8A0A075B7B6 117 aa6.9□□□□□ -1.31
PDPN-201ENST00000294489 A0A087WW49 117 aa6.9□□□□□ -1.31
PDPN-201ENST00000294489 ZNF575Q86XF7 245 aa6.9□□□□□ -1.31
PDPN-201ENST00000294489 TRAV21A0A0B4J279 112 aa6.89□□□□□ -1.31
PDPN-201ENST00000294489 TRBV7-9A0A0J9YWB2 115 aa6.89□□□□□ -1.31
PDPN-201ENST00000294489 M0QZ24 198 aa6.89□□□□□ -1.31
PDPN-201ENST00000294489 NDUFA7O95182 113 aa6.89□□□□□ -1.31
PDPN-201ENST00000294489 RAB4AP20338 218 aa6.89□□□□□ -1.31
PDPN-201ENST00000294489 EDN2P20800 178 aa6.89□□□□□ -1.31
PDPN-201ENST00000294489 HOXD3P31249 432 aaPredicted RBP6.89□□□□□ -1.31
PDPN-201ENST00000294489 WFDC3Q8IUB2 231 aa6.89□□□□□ -1.31
PDPN-201ENST00000294489 AMN1Q8IY45 258 aa6.89□□□□□ -1.31
PDPN-201ENST00000294489 ORMDL3Q8N138 153 aa6.89□□□□□ -1.31
PDPN-201ENST00000294489 DCANP1Q8TF63 244 aa6.89□□□□□ -1.31
PDPN-201ENST00000294489 TMEM191AQ9H0A3 160 aa6.89□□□□□ -1.31
PDPN-201ENST00000294489 URB1-AS1Q96HZ7 61 aa6.89□□□□□ -1.31
PDPN-201ENST00000294489 SMR3AQ99954 134 aa6.89□□□□□ -1.31
PDPN-201ENST00000294489 C11orf21Q9P2W6 132 aa6.89□□□□□ -1.31
PDPN-201ENST00000294489 SELENOKQ9Y6D0 94 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms