RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 NDUFA4O00483 81 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 IGHV3-11P01762 117 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 PPP1R32Q7Z5V6 425 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 KLHDC3Q9BQ90 382 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 TRAV13-1A0A0B4J241 112 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 SRRM4A7MD48 611 aaKnown RBP6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 VSIRQ9H7M9 311 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 MRPL36Q9P0J6 103 aaKnown RBP6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 COL4A4P53420 1690 aaPredicted RBP6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 MUC21A0A0G2JKD1 596 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 MUC21A0A140T8X8 626 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 C15orf62A8K5M9 175 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 GAGE7O76087 117 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 GAGE12FP0CL80 117 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 GAGE12GP0CL81 117 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 GAGE12IP0CL82 117 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 CSRP1P21291 193 aaKnown RBP6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 MRPL55Q7Z7F7 128 aaKnown RBP6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 NRTNQ99748 197 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 SERP1Q9Y6X1 66 aa6.84□□□□□ -1.32
CACNA1D-201ENST00000288139 PRYO14603 147 aa6.84□□□□□ -1.32
CACNA1D-201ENST00000288139 IGLV3-1P01715 115 aa6.84□□□□□ -1.32
CACNA1D-201ENST00000288139 LCNL1Q6ZST4 164 aa6.84□□□□□ -1.32
CACNA1D-201ENST00000288139 LRP4O75096 1905 aa6.83□□□□□ -1.32
CACNA1D-201ENST00000288139 GAGE12HA6NDE8 117 aa6.83□□□□□ -1.32
CACNA1D-201ENST00000288139 LINC00311Q8N616 119 aa6.83□□□□□ -1.32
CACNA1D-201ENST00000288139 ST6GALNAC3Q8NDV1 305 aa6.83□□□□□ -1.32
CACNA1D-201ENST00000288139 TMEM243Q9BU79 118 aa6.83□□□□□ -1.32
CACNA1D-201ENST00000288139 TRAV12-1A0A0B4J245 112 aa6.83□□□□□ -1.32
CACNA1D-201ENST00000288139 TAX1BP3O14907 124 aa6.83□□□□□ -1.32
CACNA1D-201ENST00000288139 CELA2BP08218 269 aaPredicted RBP6.83□□□□□ -1.32
CACNA1D-201ENST00000288139 FAM104BQ5XKR9 115 aa6.83□□□□□ -1.32
CACNA1D-201ENST00000288139 LINC01356Q8N9X3 169 aa6.83□□□□□ -1.32
CACNA1D-201ENST00000288139 RBAKDNA6NC62 111 aa6.83□□□□□ -1.32
CACNA1D-201ENST00000288139 CECR9P0C854 216 aa6.83□□□□□ -1.32
CACNA1D-201ENST00000288139 ANKRD17O75179 2603 aaKnown RBP6.83□□□□□ -1.32
CACNA1D-201ENST00000288139 BUB3O43684 328 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 HERV-K104P63124 156 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 SHANK2-AS3Q9BTD1 123 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 F8VRH5 84 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 V9GYV3 84 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 H3BMG7 143 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 ZNF474Q6S9Z5 364 aaPredicted RBP6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 PRSS29PA6NIE9 313 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 ZNF138P52744 262 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 C11orf44Q8N8P7 122 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 COL4A6Q14031 1691 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 TRBV6-1A0A0K0K1D8 114 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 M0R1W7 72 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 RPL15P61313 204 aaKnown RBP6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 ZFP36L1Q07352 338 aaKnown RBP6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 SLC25A45Q8N413 288 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 MRPL53Q96EL3 112 aaKnown RBP6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 CSTL1Q9H114 145 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 TRAV40A0A0B4J280 105 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 ANGP03950 147 aaKnown RBP6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 RPL18AQ02543 176 aaKnown RBP6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 HIGD2BQ4VC39 106 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 RPL39P5Q59GN2 51 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 ADAMTSL5Q6ZMM2 481 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 GTSF1LQ9H1H1 148 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 PIP4P2Q8N4L2 257 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 Q8TCH9 128 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 PLA2G2FQ9BZM2 168 aa6.82□□□□□ -1.32
CACNA1D-201ENST00000288139 IGKV2D-24A0A075B6R9 120 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 FOXF2Q12947 444 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 IGHV1-69DA0A0B4J2H0 117 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 SNAI2O43623 268 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 ZC2HC1BQ5TFG8 222 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 Q8N8P6 123 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 LINC01560Q8TB33 94 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 LSM4Q9Y4Z0 139 aaKnown RBP6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 IGKV1D-8A0A087WSZ0 117 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 PRSS47A8MTI9 375 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 C9JAW5 83 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 IGHV3-48P01763 117 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 ZNF493Q6ZR52 646 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 RNF185Q96GF1 192 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 PRDM6Q9NQX0 595 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 D6R8Y8 96 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 C16orf47Q6ZP98 133 aaPredicted RBP6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 Q6ZS92 163 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 TEN1Q86WV5 123 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 DEFB105AQ8NG35 78 aa6.81□□□□□ -1.32
CACNA1D-201ENST00000288139 IGHV3-73A0A0B4J1V6 119 aa6.8□□□□□ -1.32
CACNA1D-201ENST00000288139 C17orf100A8MU93 164 aa6.8□□□□□ -1.32
CACNA1D-201ENST00000288139 RNF152Q8N8N0 203 aa6.8□□□□□ -1.32
CACNA1D-201ENST00000288139 LTBP2Q14767 1821 aa6.8□□□□□ -1.32
CACNA1D-201ENST00000288139 USP17L23D6RBM5 183 aa6.8□□□□□ -1.32
CACNA1D-201ENST00000288139 DYNAPQ8N1N2 210 aa6.8□□□□□ -1.32
CACNA1D-201ENST00000288139 B9D2Q9BPU9 175 aa6.8□□□□□ -1.32
CACNA1D-201ENST00000288139 C15orf32Q32M92 178 aa6.8□□□□□ -1.32
CACNA1D-201ENST00000288139 PRRC2CQ9Y520 2896 aaKnown RBP6.8□□□□□ -1.32
CACNA1D-201ENST00000288139 C9orf47Q6ZRZ4 202 aa6.8□□□□□ -1.32
CACNA1D-201ENST00000288139 ADAMTS20P59510 1910 aa6.8□□□□□ -1.32
CACNA1D-201ENST00000288139 H3BTX0 84 aa6.8□□□□□ -1.32
CACNA1D-201ENST00000288139 TGFBR3LH3BV60 316 aa6.8□□□□□ -1.32
CACNA1D-201ENST00000288139 RHOHQ15669 191 aa6.8□□□□□ -1.32
CACNA1D-201ENST00000288139 Q6P435 159 aa6.8□□□□□ -1.32
CACNA1D-201ENST00000288139 MRPL23Q16540 153 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms