RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 TMEM95Q3KNT9 176 aa14.65□□□□□ -0.06
PCDH1-201ENST00000287008 Q8NA96 180 aa14.65□□□□□ -0.06
PCDH1-201ENST00000287008 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.64□□□□□ -0.07
PCDH1-201ENST00000287008 BLCAPP62952 87 aa14.64□□□□□ -0.07
PCDH1-201ENST00000287008 HSD52Q0P140 79 aa14.64□□□□□ -0.07
PCDH1-201ENST00000287008 HAPLN4Q86UW8 402 aa14.64□□□□□ -0.07
PCDH1-201ENST00000287008 TMEM256Q8N2U0 113 aa14.64□□□□□ -0.07
PCDH1-201ENST00000287008 DENND4CQ5VZ89 1909 aa14.64□□□□□ -0.07
PCDH1-201ENST00000287008 HIST3H2BBQ8N257 126 aa14.64□□□□□ -0.07
PCDH1-201ENST00000287008 ZNRF2Q8NHG8 242 aa14.64□□□□□ -0.07
PCDH1-201ENST00000287008 TIMM21Q9BVV7 248 aa14.64□□□□□ -0.07
PCDH1-201ENST00000287008 DEFB136Q30KP8 78 aa14.64□□□□□ -0.07
PCDH1-201ENST00000287008 SPXQ9BT56 116 aa14.64□□□□□ -0.07
PCDH1-201ENST00000287008 FNDC4Q9H6D8 234 aaPredicted RBP14.64□□□□□ -0.07
PCDH1-201ENST00000287008 PRSS46E5RG02 174 aa14.63□□□□□ -0.07
PCDH1-201ENST00000287008 ZNF561-AS1K7EIQ3 104 aa14.63□□□□□ -0.07
PCDH1-201ENST00000287008 FOXE3Q13461 319 aa14.63□□□□□ -0.07
PCDH1-201ENST00000287008 EML6Q6ZMW3 1958 aa14.63□□□□□ -0.07
PCDH1-201ENST00000287008 GATD1Q8NB37 220 aa14.63□□□□□ -0.07
PCDH1-201ENST00000287008 NDUFAF3Q9BU61 184 aa14.63□□□□□ -0.07
PCDH1-201ENST00000287008 NPC2P61916 151 aa14.62□□□□□ -0.07
PCDH1-201ENST00000287008 GSN-AS1Q9NRJ2 163 aa14.62□□□□□ -0.07
PCDH1-201ENST00000287008 FAM104BQ5XKR9 115 aa14.62□□□□□ -0.07
PCDH1-201ENST00000287008 FGF23Q9GZV9 251 aaPredicted RBP14.62□□□□□ -0.07
PCDH1-201ENST00000287008 SDHAF1A6NFY7 115 aa14.62□□□□□ -0.07
PCDH1-201ENST00000287008 C10orf126Q8N4M7 172 aa14.62□□□□□ -0.07
PCDH1-201ENST00000287008 SLAQ13239 276 aa14.61□□□□□ -0.07
PCDH1-201ENST00000287008 ZNF479Q96JC4 524 aa14.61□□□□□ -0.07
PCDH1-201ENST00000287008 IGHV7-81A0A0B4J1V7 117 aa14.61□□□□□ -0.07
PCDH1-201ENST00000287008 FOXI2Q6ZQN5 318 aa14.61□□□□□ -0.07
PCDH1-201ENST00000287008 C2orf66Q6UXQ4 117 aa14.61□□□□□ -0.07
PCDH1-201ENST00000287008 MRAPQ8TCY5 172 aa14.61□□□□□ -0.07
PCDH1-201ENST00000287008 TMEM243Q9BU79 118 aa14.61□□□□□ -0.07
PCDH1-201ENST00000287008 UBE2CO00762 179 aa14.6□□□□□ -0.07
PCDH1-201ENST00000287008 C9orf66Q5T8R8 295 aa14.6□□□□□ -0.07
PCDH1-201ENST00000287008 C3orf79P0CE67 100 aa14.6□□□□□ -0.07
PCDH1-201ENST00000287008 CYYR1Q96J86 154 aa14.6□□□□□ -0.07
PCDH1-201ENST00000287008 I3L3M4 83 aa14.6□□□□□ -0.07
PCDH1-201ENST00000287008 SPAG8Q99932 426 aaPredicted RBP14.6□□□□□ -0.07
PCDH1-201ENST00000287008 TP53TG1Q9Y2A0 90 aa14.6□□□□□ -0.07
PCDH1-201ENST00000287008 A0A1B0GV90 55 aa14.6□□□□□ -0.07
PCDH1-201ENST00000287008 GUSBP1Q15486 140 aa14.6□□□□□ -0.07
PCDH1-201ENST00000287008 SYS1-DBNDD2H3BUS1 97 aa14.59□□□□□ -0.07
PCDH1-201ENST00000287008 NACAE9PAV3 2078 aa14.59□□□□□ -0.07
PCDH1-201ENST00000287008 WIPF3A6NGB9 483 aa14.59□□□□□ -0.07
PCDH1-201ENST00000287008 PRR20EP86478 221 aa14.59□□□□□ -0.07
PCDH1-201ENST00000287008 PRR20CP86479 221 aa14.59□□□□□ -0.07
PCDH1-201ENST00000287008 PRR20DP86480 221 aa14.59□□□□□ -0.07
PCDH1-201ENST00000287008 PRR20BP86481 221 aa14.59□□□□□ -0.07
PCDH1-201ENST00000287008 PRR20AP86496 221 aa14.59□□□□□ -0.07
PCDH1-201ENST00000287008 ATXN8Q156A1 80 aa14.59□□□□□ -0.07
PCDH1-201ENST00000287008 KIF26AQ9ULI4 1882 aaPredicted RBP14.58□□□□□ -0.08
PCDH1-201ENST00000287008 WISP2O76076 250 aa14.58□□□□□ -0.08
PCDH1-201ENST00000287008 TRAV8-2A0A0B4J237 113 aa14.58□□□□□ -0.08
PCDH1-201ENST00000287008 BCL6BQ8N143 479 aaPredicted RBP14.58□□□□□ -0.08
PCDH1-201ENST00000287008 IGFBPL1Q8WX77 278 aa14.58□□□□□ -0.08
PCDH1-201ENST00000287008 FAM231DQ6ZW35 169 aa14.57□□□□□ -0.08
PCDH1-201ENST00000287008 FXYD5Q96DB9 178 aa14.57□□□□□ -0.08
PCDH1-201ENST00000287008 RMI2Q96E14 147 aa14.57□□□□□ -0.08
PCDH1-201ENST00000287008 VWC2Q2TAL6 325 aa14.57□□□□□ -0.08
PCDH1-201ENST00000287008 KRTAP27-1Q3LI81 207 aa14.57□□□□□ -0.08
PCDH1-201ENST00000287008 PYGO2Q9BRQ0 406 aa14.57□□□□□ -0.08
PCDH1-201ENST00000287008 INS-IGF2F8WCM5 200 aa14.57□□□□□ -0.08
PCDH1-201ENST00000287008 NPBQ8NG41 125 aa14.57□□□□□ -0.08
PCDH1-201ENST00000287008 IGF2BP2-AS1Q96M15 143 aa14.57□□□□□ -0.08
PCDH1-201ENST00000287008 LEPROTO15243 131 aa14.57□□□□□ -0.08
PCDH1-201ENST00000287008 F6UB75 175 aa14.56□□□□□ -0.08
PCDH1-201ENST00000287008 ZNF726P1Q15940 193 aa14.56□□□□□ -0.08
PCDH1-201ENST00000287008 Q6ZSR3 168 aa14.56□□□□□ -0.08
PCDH1-201ENST00000287008 F8WEM9 126 aa14.56□□□□□ -0.08
PCDH1-201ENST00000287008 SLURP1P55000 103 aa14.56□□□□□ -0.08
PCDH1-201ENST00000287008 GAGE6Q13070 117 aa14.56□□□□□ -0.08
PCDH1-201ENST00000287008 AJUBAQ96IF1 538 aa14.56□□□□□ -0.08
PCDH1-201ENST00000287008 NCOA6Q14686 2063 aaPredicted RBP14.56□□□□□ -0.08
PCDH1-201ENST00000287008 C2orf16Q68DN1 1984 aa14.56□□□□□ -0.08
PCDH1-201ENST00000287008 GP9P14770 177 aa14.56□□□□□ -0.08
PCDH1-201ENST00000287008 CHAC1Q9BUX1 264 aa14.56□□□□□ -0.08
PCDH1-201ENST00000287008 IGHV3-38A0A0C4DH36 116 aa14.55□□□□□ -0.08
PCDH1-201ENST00000287008 hDV102S1A0JD36 115 aa14.55□□□□□ -0.08
PCDH1-201ENST00000287008 EREGO14944 169 aa14.55□□□□□ -0.08
PCDH1-201ENST00000287008 PRSS57Q6UWY2 283 aa14.55□□□□□ -0.08
PCDH1-201ENST00000287008 ZNF625Q96I27 306 aaPredicted RBP14.55□□□□□ -0.08
PCDH1-201ENST00000287008 PRORYQ9H606 182 aa14.55□□□□□ -0.08
PCDH1-201ENST00000287008 LENEPQ9Y5L5 61 aa14.55□□□□□ -0.08
PCDH1-201ENST00000287008 A8MWP6 167 aa14.54□□□□□ -0.08
PCDH1-201ENST00000287008 C9JQL5 133 aa14.54□□□□□ -0.08
PCDH1-201ENST00000287008 Q8N9W7 124 aa14.54□□□□□ -0.08
PCDH1-201ENST00000287008 MRPL53Q96EL3 112 aaKnown RBP14.54□□□□□ -0.08
PCDH1-201ENST00000287008 AGPAT4-IT1Q9H0P7 198 aa14.54□□□□□ -0.08
PCDH1-201ENST00000287008 TLN2Q9Y4G6 2542 aa14.54□□□□□ -0.08
PCDH1-201ENST00000287008 Q8N8P6 123 aa14.54□□□□□ -0.08
PCDH1-201ENST00000287008 PIFOQ8TCI5 191 aa14.54□□□□□ -0.08
PCDH1-201ENST00000287008 LAMTOR3Q9UHA4 124 aa14.54□□□□□ -0.08
PCDH1-201ENST00000287008 SRSF2Q01130 221 aaKnown RBP14.53□□□□□ -0.08
PCDH1-201ENST00000287008 TMEM141Q96I45 108 aa14.53□□□□□ -0.08
PCDH1-201ENST00000287008 C11orf52Q96A22 123 aa14.53□□□□□ -0.08
PCDH1-201ENST00000287008 ZC2HC1AQ96GY0 325 aa14.53□□□□□ -0.08
PCDH1-201ENST00000287008 ZFP36P26651 326 aaKnown RBP14.53□□□□□ -0.08
PCDH1-201ENST00000287008 HLA-DMBP28068 263 aa14.53□□□□□ -0.08
PCDH1-201ENST00000287008 RHOHQ15669 191 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms