RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 CBY3A6NI87 242 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 LINC00614P0C842 121 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 ZNF25P17030 456 aaPredicted RBP4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 CKS2P33552 79 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 RAB9AP51151 201 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 DEFB136Q30KP8 78 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 OR4B1Q8NGF8 309 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 OR8A1Q8NGG7 326 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 RHPN1-AS1Q9BWJ2 59 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 GCN1Q92616 2671 aaKnown RBP4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 NACAE9PAV3 2078 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 FABP5P3A8MUU1 101 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 GAS8-AS1O95177 125 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 RPLP1P05386 114 aaKnown RBP4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 HTN1P15515 57 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 GATA1P15976 413 aaPredicted RBP4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 RAB4AP20338 218 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 IFI27P40305 119 aaPredicted RBP4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 CT83Q5H943 113 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 REC114Q7Z4M0 266 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 SMIM12Q96EX1 92 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 ZNF48Q96MX3 618 aaPredicted RBP4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 TRAV26-2A0A0B4J265 109 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 IGHV1-24A0A0C4DH33 117 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 NPIPB6E9PJ23 425 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 H3BVH4 76 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 M0R381 172 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 HOXA3O43365 443 aaPredicted RBP4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 IGHG2P01859 326 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 S100A4P26447 101 aaKnown RBP4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 BMI1P35226 326 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 LOXL1Q08397 574 aaPredicted RBP4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 URB1-AS1Q96HZ7 61 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 C20orf173Q96LM9 149 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 C18orf15Q96N68 181 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 SPOCK3Q9BQ16 436 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 MEGF9Q9H1U4 602 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 AP5S1Q9NUS5 200 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 UNC79Q9P2D8 2635 aa4.63□□□□□ -1.67
TNFSF4-201ENST00000281834 TRAV8-2A0A0B4J237 113 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 SNAI2O43623 268 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 ZNF688P0C7X2 276 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 SYNJ2BPP57105 145 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 CTAG1AP78358 180 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 C1orf194Q5T5A4 169 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 SPANXN1Q5VSR9 72 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 RASL11AQ6T310 242 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 PRSS57Q6UWY2 283 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 OR10AG1Q8NH19 301 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 PRELID3AQ96N28 172 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 NDUFAF3Q9BU61 184 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 FAM223BA6NKX1 122 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 HAX1O00165 279 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 RNASE4P34096 147 aaKnown RBP4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 Q6ZN92 141 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 FAM223AQ8IWN6 122 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 SLC50A1Q9BRV3 221 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 GFRA4Q9GZZ7 299 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 C11orf21Q9P2W6 132 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 hDV102S1A0JD36 115 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 SLC25A16P16260 332 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 BTF3P20290 206 aaKnown RBP4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 SPATA12Q7Z6I5 190 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 PPP1R14DQ9NXH3 145 aa4.62□□□□□ -1.67
TNFSF4-201ENST00000281834 PRR9Q5T870 116 aa4.61□□□□□ -1.67
TNFSF4-201ENST00000281834 WFDC11Q8NEX6 87 aa4.61□□□□□ -1.67
TNFSF4-201ENST00000281834 OR10J6PQ8NGY7 276 aa4.61□□□□□ -1.67
TNFSF4-201ENST00000281834 TMEM70Q9BUB7 260 aa4.61□□□□□ -1.67
TNFSF4-201ENST00000281834 A0A0G2JLM5 398 aa4.61□□□□□ -1.67
TNFSF4-201ENST00000281834 A0A1W2PRX2 142 aa4.61□□□□□ -1.67
TNFSF4-201ENST00000281834 M0QZK8 103 aa4.61□□□□□ -1.67
TNFSF4-201ENST00000281834 NPYP01303 97 aa4.61□□□□□ -1.67
TNFSF4-201ENST00000281834 ESDP10768 282 aa4.61□□□□□ -1.67
TNFSF4-201ENST00000281834 MRPL51Q4U2R6 128 aaKnown RBP4.61□□□□□ -1.67
TNFSF4-201ENST00000281834 ERASQ7Z444 233 aa4.61□□□□□ -1.67
TNFSF4-201ENST00000281834 SNHG12Q9BXW3 62 aa4.61□□□□□ -1.67
TNFSF4-201ENST00000281834 DAZ1Q9NQZ3 744 aaKnown RBP4.61□□□□□ -1.67
TNFSF4-201ENST00000281834 IGKV3D-20A0A0C4DH25 116 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 OR4C46A6NHA9 309 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 C18orf65Q6ZTR6 163 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 ORMDL3Q8N138 153 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 PEF1Q9UBV8 284 aaKnown RBP4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 TRAV12-2A0A075B6T6 113 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 FAM231BA6NCW3 169 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 OR5AL1P0C617 328 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 DEFB113Q30KQ7 82 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 PSMG4Q5JS54 123 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 FAM104BQ5XKR9 115 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 C16orf54Q6UWD8 224 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 TEX43Q6ZNM6 134 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 NDUFA4O00483 81 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 MGPP08493 103 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 IGHV4-31P0DP07 118 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 HINT1P49773 126 aaPredicted RBP4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 HNRNPA3P51991 378 aaKnown RBP4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 DSCR9P59020 149 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 Q8N976 141 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 USMG5Q96IX5 58 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 MAP1LC3CQ9BXW4 147 aa4.6□□□□□ -1.67
TNFSF4-201ENST00000281834 SIGLEC8Q9NYZ4 499 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms