RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ZNF705BP0CI00 300 aaPredicted RBP15.85■□□□□ 0.13
YBX3-202ENST00000279550 ZNF138P52744 262 aa15.85■□□□□ 0.13
YBX3-202ENST00000279550 IQCJQ1A5X6 159 aa15.85■□□□□ 0.13
YBX3-202ENST00000279550 OR10J3Q5JRS4 329 aa15.85■□□□□ 0.13
YBX3-202ENST00000279550 ZNF738Q8NE65 137 aa15.85■□□□□ 0.13
YBX3-202ENST00000279550 RCHY1Q96PM5 261 aa15.85■□□□□ 0.13
YBX3-202ENST00000279550 A0A1B0GUT8 65 aa15.84■□□□□ 0.13
YBX3-202ENST00000279550 DEFB1P60022 68 aa15.84■□□□□ 0.13
YBX3-202ENST00000279550 C9orf47Q6ZRZ4 202 aa15.84■□□□□ 0.13
YBX3-202ENST00000279550 ALKBH7Q9BT30 221 aaPredicted RBP15.84■□□□□ 0.13
YBX3-202ENST00000279550 NRN1Q9NPD7 142 aa15.84■□□□□ 0.13
YBX3-202ENST00000279550 IGKV3-7A0A075B6H7 116 aa15.83■□□□□ 0.13
YBX3-202ENST00000279550 IGHV4OR15-8A0A075B7B6 117 aa15.83■□□□□ 0.13
YBX3-202ENST00000279550 A0A087WW49 117 aa15.83■□□□□ 0.13
YBX3-202ENST00000279550 C18orf32Q8TCD1 76 aa15.83■□□□□ 0.13
YBX3-202ENST00000279550 TPPP3Q9BW30 176 aa15.83■□□□□ 0.13
YBX3-202ENST00000279550 CLEC5AQ9NY25 188 aa15.83■□□□□ 0.13
YBX3-202ENST00000279550 BMI1P35226 326 aa15.82■□□□□ 0.12
YBX3-202ENST00000279550 PROK1P58294 105 aa15.82■□□□□ 0.12
YBX3-202ENST00000279550 RPL11P62913 178 aaKnown RBP15.82■□□□□ 0.12
YBX3-202ENST00000279550 KHDC1LQ5JSQ8 128 aa15.82■□□□□ 0.12
YBX3-202ENST00000279550 TMEM78Q5T7P6 136 aa15.82■□□□□ 0.12
YBX3-202ENST00000279550 UFC1Q9Y3C8 167 aa15.82■□□□□ 0.12
YBX3-202ENST00000279550 TMEM213A2RRL7 107 aa15.82■□□□□ 0.12
YBX3-202ENST00000279550 LYZL1Q6UWQ5 148 aa15.82■□□□□ 0.12
YBX3-202ENST00000279550 C18orf65Q6ZTR6 163 aa15.82■□□□□ 0.12
YBX3-202ENST00000279550 RIGQ13278 110 aa15.81■□□□□ 0.12
YBX3-202ENST00000279550 JOSD1Q15040 202 aaPredicted RBP15.81■□□□□ 0.12
YBX3-202ENST00000279550 C4orf3Q8WVX3 66 aa15.81■□□□□ 0.12
YBX3-202ENST00000279550 FABP5P3A8MUU1 101 aa15.8■□□□□ 0.12
YBX3-202ENST00000279550 CD28P10747 220 aa15.8■□□□□ 0.12
YBX3-202ENST00000279550 KLF5Q13887 457 aaPredicted RBP15.8■□□□□ 0.12
YBX3-202ENST00000279550 Q6AWC8 147 aa15.8■□□□□ 0.12
YBX3-202ENST00000279550 C11orf44Q8N8P7 122 aa15.8■□□□□ 0.12
YBX3-202ENST00000279550 C11orf21Q9P2W6 132 aa15.8■□□□□ 0.12
YBX3-202ENST00000279550 GATD1Q8NB37 220 aa15.8■□□□□ 0.12
YBX3-202ENST00000279550 WFDC12Q8WWY7 111 aa15.8■□□□□ 0.12
YBX3-202ENST00000279550 NIPBLQ6KC79 2804 aaeCLIP15.79■□□□□ 0.12
YBX3-202ENST00000279550 MUC21A0A0G2JKD1 596 aa15.79■□□□□ 0.12
YBX3-202ENST00000279550 MUC21A0A140T8X8 626 aa15.79■□□□□ 0.12
YBX3-202ENST00000279550 ORM1P02763 201 aa15.79■□□□□ 0.12
YBX3-202ENST00000279550 IGLC6P0CF74 106 aa15.79■□□□□ 0.12
YBX3-202ENST00000279550 SYNJ2BPP57105 145 aa15.79■□□□□ 0.12
YBX3-202ENST00000279550 RPS20P60866 119 aaKnown RBP15.79■□□□□ 0.12
YBX3-202ENST00000279550 MUC21Q5SSG8 566 aa15.79■□□□□ 0.12
YBX3-202ENST00000279550 PRR9Q5T870 116 aa15.79■□□□□ 0.12
YBX3-202ENST00000279550 HIST2H2BDQ6DRA6 164 aa15.79■□□□□ 0.12
YBX3-202ENST00000279550 Q6ZQT7 251 aa15.79■□□□□ 0.12
YBX3-202ENST00000279550 GSN-AS1Q9NRJ2 163 aa15.79■□□□□ 0.12
YBX3-202ENST00000279550 PPP1R14DQ9NXH3 145 aa15.79■□□□□ 0.12
YBX3-202ENST00000279550 LOC102724200A0A096LPH7 203 aaPredicted RBP15.78■□□□□ 0.12
YBX3-202ENST00000279550 LINC01559Q495D7 138 aa15.78■□□□□ 0.12
YBX3-202ENST00000279550 REC114Q7Z4M0 266 aa15.78■□□□□ 0.12
YBX3-202ENST00000279550 KLHL30-AS1Q8NEE0 82 aa15.78■□□□□ 0.12
YBX3-202ENST00000279550 F6UB75 175 aa15.77■□□□□ 0.12
YBX3-202ENST00000279550 OVOL1O14753 267 aa15.77■□□□□ 0.12
YBX3-202ENST00000279550 HOXD3P31249 432 aaPredicted RBP15.77■□□□□ 0.12
YBX3-202ENST00000279550 PAFAH1B2P68402 229 aa15.77■□□□□ 0.12
YBX3-202ENST00000279550 Q6ZWC4 215 aa15.77■□□□□ 0.12
YBX3-202ENST00000279550 KCNS1Q96KK3 526 aa15.77■□□□□ 0.12
YBX3-202ENST00000279550 CITED2Q99967 270 aaPredicted RBP15.77■□□□□ 0.12
YBX3-202ENST00000279550 CTRLP40313 264 aa15.77■□□□□ 0.11
YBX3-202ENST00000279550 SSTP61278 116 aa15.77■□□□□ 0.11
YBX3-202ENST00000279550 DEFB136Q30KP8 78 aa15.77■□□□□ 0.11
YBX3-202ENST00000279550 DNLZQ5SXM8 178 aa15.77■□□□□ 0.11
YBX3-202ENST00000279550 FER1L6-AS1Q8NA97 138 aa15.77■□□□□ 0.11
YBX3-202ENST00000279550 MAST4O15021 2626 aa15.76■□□□□ 0.11
YBX3-202ENST00000279550 HIST1H1AQ02539 215 aaPredicted RBP15.76■□□□□ 0.11
YBX3-202ENST00000279550 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.76■□□□□ 0.11
YBX3-202ENST00000279550 TSSC4Q9Y5U2 329 aaPredicted RBP15.76■□□□□ 0.11
YBX3-202ENST00000279550 C2CD3Q4AC94 2353 aa15.76■□□□□ 0.11
YBX3-202ENST00000279550 IGKV3D-20A0A0C4DH25 116 aa15.75■□□□□ 0.11
YBX3-202ENST00000279550 A0A1B0GW15 77 aa15.75■□□□□ 0.11
YBX3-202ENST00000279550 WFDC3Q8IUB2 231 aa15.75■□□□□ 0.11
YBX3-202ENST00000279550 OR10J6PQ8NGY7 276 aa15.75■□□□□ 0.11
YBX3-202ENST00000279550 DCANP1Q8TF63 244 aa15.75■□□□□ 0.11
YBX3-202ENST00000279550 BORCS7Q96B45 105 aa15.75■□□□□ 0.11
YBX3-202ENST00000279550 SAMD10Q9BYL1 202 aa15.75■□□□□ 0.11
YBX3-202ENST00000279550 LGALS9O00182 355 aa15.74■□□□□ 0.11
YBX3-202ENST00000279550 GPX1P07203 203 aa15.74■□□□□ 0.11
YBX3-202ENST00000279550 CD33P20138 364 aa15.74■□□□□ 0.11
YBX3-202ENST00000279550 ZFAND2AQ8N6M9 145 aa15.74■□□□□ 0.11
YBX3-202ENST00000279550 OR11H1Q8NG94 326 aa15.74■□□□□ 0.11
YBX3-202ENST00000279550 URB1-AS1Q96HZ7 61 aa15.74■□□□□ 0.11
YBX3-202ENST00000279550 LINC00477Q96M19 166 aa15.74■□□□□ 0.11
YBX3-202ENST00000279550 A0A1W2PRX2 142 aa15.74■□□□□ 0.11
YBX3-202ENST00000279550 PMCHP20382 165 aa15.74■□□□□ 0.11
YBX3-202ENST00000279550 OR8A1Q8NGG7 326 aa15.74■□□□□ 0.11
YBX3-202ENST00000279550 LINC01619G3V211 115 aa15.73■□□□□ 0.11
YBX3-202ENST00000279550 M0QZ24 198 aa15.73■□□□□ 0.11
YBX3-202ENST00000279550 SLURP1P55000 103 aa15.73■□□□□ 0.11
YBX3-202ENST00000279550 ZNF493Q6ZR52 646 aa15.73■□□□□ 0.11
YBX3-202ENST00000279550 LENEPQ9Y5L5 61 aa15.73■□□□□ 0.11
YBX3-202ENST00000279550 TEP1Q99973 2627 aaKnown RBP15.73■□□□□ 0.11
YBX3-202ENST00000279550 J3KRW8 73 aa15.72■□□□□ 0.11
YBX3-202ENST00000279550 ADAMTSL5Q6ZMM2 481 aa15.72■□□□□ 0.11
YBX3-202ENST00000279550 FAM19A2Q8N3H0 131 aa15.72■□□□□ 0.11
YBX3-202ENST00000279550 OR1N2Q8NGR9 330 aa15.72■□□□□ 0.11
YBX3-202ENST00000279550 FAM19A4Q96LR4 140 aa15.72■□□□□ 0.11
YBX3-202ENST00000279550 MS4A6AQ9H2W1 248 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms