RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 MMP23AO75900 390 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 PFN1P07737 140 aaKnown RBP2.26□□□□□ -2.05
HERC4-201ENST00000277817 RPL13AP40429 203 aaKnown RBP2.26□□□□□ -2.05
HERC4-201ENST00000277817 RHOGP84095 191 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 IGFL4Q6B9Z1 124 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 LCN12Q6JVE5 192 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 ZNF664Q8N3J9 261 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 FER1L6-AS1Q8NA97 138 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 TMEM167AQ8TBQ9 72 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 CCL19Q99731 98 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 RNASE2P10153 161 aaKnown RBP2.26□□□□□ -2.05
HERC4-201ENST00000277817 RNASE4P34096 147 aaKnown RBP2.26□□□□□ -2.05
HERC4-201ENST00000277817 FXYD7P58549 80 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 LMO4P61968 165 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 LAGE3Q14657 143 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 ODF3L2Q3SX64 289 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 PRR30Q53SZ7 412 aaPredicted RBP2.26□□□□□ -2.05
HERC4-201ENST00000277817 ACTL10Q5JWF8 245 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 NUP35Q8NFH5 326 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 DDB2Q92466 427 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 FAM168AQ92567 244 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 SLC25A39Q9BZJ4 359 aaPredicted RBP2.26□□□□□ -2.05
HERC4-201ENST00000277817 FGF23Q9GZV9 251 aaPredicted RBP2.26□□□□□ -2.05
HERC4-201ENST00000277817 SIGLEC9Q9Y336 463 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 PRR14LQ5THK1 2151 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 TRAV9-2A0A087WT02 112 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 E7EQL1 145 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 BUB1B-PAK6H3BSN5 160 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 RHODO00212 210 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 TCRAP04437 139 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 IGHV4-30-4P0DP06 118 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 COX6B1P14854 86 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 EVI2AP22794 236 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 LEPP41159 167 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 SSC4DQ8WTU2 575 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 FOXC2Q99958 501 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 PCNX3Q9H6A9 2034 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 ARFGEF3Q5TH69 2177 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 MED13Q9UHV7 2174 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 IGKV2-40A0A087WW87 121 aaPredicted RBP2.25□□□□□ -2.05
HERC4-201ENST00000277817 IGHV2-70DA0A0C4DH43 119 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 KIR2DL5BA0A0G2JN68 375 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 KIR2DL5BA0A0G2JPC4 375 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 NDUFA3O95167 84 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 IGKV2D-40P01614 121 aaPredicted RBP2.25□□□□□ -2.05
HERC4-201ENST00000277817 IGHV2-5P01817 119 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 CNTFRP26992 372 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 VDAC2P45880 294 aaPredicted RBP2.25□□□□□ -2.05
HERC4-201ENST00000277817 ZNF56Q15929 161 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 C15orf32Q32M92 178 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 OR10J3Q5JRS4 329 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 C1orf194Q5T5A4 169 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 KIR2DL5AQ8N109 375 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 NUP37Q8NFH4 326 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 KIR2DL5BQ8NHK3 375 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 C11orf45Q8TAV5 145 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 DEFB104AQ8WTQ1 72 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 KIR2DL4Q99706 377 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 SOX21Q9Y651 276 aaPredicted RBP2.25□□□□□ -2.05
HERC4-201ENST00000277817 ARHGAP21Q5T5U3 1957 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 A0A1W2PPI3 338 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 C3orf79P0CE67 100 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 SNRPD3P62318 126 aaKnown RBP2.25□□□□□ -2.05
HERC4-201ENST00000277817 DIAPH2-AS1Q14236 149 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 C17orf58Q2M2W7 97 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 TMEM249Q2WGJ8 235 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 TMEM170BQ5T4T1 132 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 VMO1Q7Z5L0 202 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 C11orf53Q8IXP5 236 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 SYT8Q8NBV8 401 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 SCGB3A1Q96QR1 104 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 TMEM14BQ9NUH8 114 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 A0A0G2JLM5 398 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 A0A1B0GW15 77 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 FAM181BA6NEQ2 426 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 OR11H12B2RN74 326 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 CEACAM4O75871 244 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 NCR2O95944 276 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 SMIM13P0DJ93 91 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 TSPOP30536 169 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 ASIPP42127 132 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 NDPQ00604 133 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 SPRNQ5BIV9 151 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 TPTE2P1Q5T6R2 138 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 LYRM7Q5U5X0 104 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 Q6AWC8 147 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 LYZL1Q6UWQ5 148 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 BRD3OSQ6XYD6 125 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 OR11H1Q8NG94 326 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 OR11H2Q8NH07 326 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 Q8TAT8 98 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 TRGV9Q99603 122 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 Q9HAA7 133 aa2.25□□□□□ -2.05
HERC4-201ENST00000277817 USP9YO00507 2555 aaPredicted RBP2.25□□□□□ -2.05
HERC4-201ENST00000277817 SETD2Q9BYW2 2564 aaPredicted RBP2.25□□□□□ -2.05
HERC4-201ENST00000277817 hDV102S1A0JD36 115 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 D6R8Y8 96 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 K7ENP7 123 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 CACNG7P62955 275 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 WT1-ASQ06250 92 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms