RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 KLK15Q9H2R5 256 aa14.43□□□□□ -0.1
SSC4D-201ENST00000275560 IGLV2-18A0A075B6J9 118 aa14.42□□□□□ -0.1
SSC4D-201ENST00000275560 IGKV3D-20A0A0C4DH25 116 aa14.42□□□□□ -0.1
SSC4D-201ENST00000275560 GAGE12HA6NDE8 117 aa14.42□□□□□ -0.1
SSC4D-201ENST00000275560 PIP4P1Q86T03 277 aa14.42□□□□□ -0.1
SSC4D-201ENST00000275560 CTSGP08311 255 aa14.42□□□□□ -0.1
SSC4D-201ENST00000275560 C12orf74Q32Q52 190 aa14.42□□□□□ -0.1
SSC4D-201ENST00000275560 FOXI2Q6ZQN5 318 aa14.42□□□□□ -0.1
SSC4D-201ENST00000275560 HRNRQ86YZ3 2850 aaPredicted RBP14.42□□□□□ -0.1
SSC4D-201ENST00000275560 SPAG8Q99932 426 aaPredicted RBP14.42□□□□□ -0.1
SSC4D-201ENST00000275560 CHTOPQ9Y3Y2 248 aaKnown RBP14.42□□□□□ -0.1
SSC4D-201ENST00000275560 C5orf64Q2M2E5 130 aa14.41□□□□□ -0.1
SSC4D-201ENST00000275560 HIST1H4GQ99525 98 aa14.41□□□□□ -0.1
SSC4D-201ENST00000275560 LINC01546A6NGU7 62 aa14.41□□□□□ -0.1
SSC4D-201ENST00000275560 CEACAM3P40198 252 aa14.41□□□□□ -0.1
SSC4D-201ENST00000275560 Q8N8P6 123 aa14.41□□□□□ -0.1
SSC4D-201ENST00000275560 SRSF8Q9BRL6 282 aaKnown RBP14.41□□□□□ -0.1
SSC4D-201ENST00000275560 ANKHD1Q8IWZ3 2542 aaKnown RBP14.41□□□□□ -0.1
SSC4D-201ENST00000275560 CELSR1Q9NYQ6 3014 aa14.4□□□□□ -0.1
SSC4D-201ENST00000275560 ZNF292O60281 2723 aa14.4□□□□□ -0.1
SSC4D-201ENST00000275560 VSTM5A8MXK1 200 aa14.4□□□□□ -0.1
SSC4D-201ENST00000275560 ATP5G2Q06055 141 aa14.4□□□□□ -0.1
SSC4D-201ENST00000275560 SFTA2Q6UW10 78 aa14.4□□□□□ -0.1
SSC4D-201ENST00000275560 CNFNQ9BYD5 112 aa14.4□□□□□ -0.1
SSC4D-201ENST00000275560 DPM3Q9P2X0 92 aa14.4□□□□□ -0.1
SSC4D-201ENST00000275560 TLN1Q9Y490 2541 aaKnown RBP14.4□□□□□ -0.1
SSC4D-201ENST00000275560 CD300EQ496F6 205 aaPredicted RBP14.39□□□□□ -0.11
SSC4D-201ENST00000275560 RNF5Q99942 180 aa14.39□□□□□ -0.11
SSC4D-201ENST00000275560 ATP5LO75964 103 aa14.38□□□□□ -0.11
SSC4D-201ENST00000275560 CCDC144NLQ6NUI1 221 aa14.38□□□□□ -0.11
SSC4D-201ENST00000275560 MYOZ3Q8TDC0 251 aa14.38□□□□□ -0.11
SSC4D-201ENST00000275560 SPTBN1Q01082 2364 aaKnown RBP14.38□□□□□ -0.11
SSC4D-201ENST00000275560 NRACQ8N912 160 aa14.38□□□□□ -0.11
SSC4D-201ENST00000275560 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.37□□□□□ -0.11
SSC4D-201ENST00000275560 J3KRW8 73 aa14.37□□□□□ -0.11
SSC4D-201ENST00000275560 PRR30Q53SZ7 412 aaPredicted RBP14.37□□□□□ -0.11
SSC4D-201ENST00000275560 WFDC12Q8WWY7 111 aa14.37□□□□□ -0.11
SSC4D-201ENST00000275560 ZFHX2Q9C0A1 2572 aaPredicted RBP14.37□□□□□ -0.11
SSC4D-201ENST00000275560 LAGE3Q14657 143 aa14.37□□□□□ -0.11
SSC4D-201ENST00000275560 LINC01559Q495D7 138 aa14.37□□□□□ -0.11
SSC4D-201ENST00000275560 NPBQ8NG41 125 aa14.37□□□□□ -0.11
SSC4D-201ENST00000275560 LINC01560Q8TB33 94 aa14.37□□□□□ -0.11
SSC4D-201ENST00000275560 CYSLTR1Q9Y271 337 aa14.37□□□□□ -0.11
SSC4D-201ENST00000275560 F8W1H4 67 aa14.36□□□□□ -0.11
SSC4D-201ENST00000275560 TTC9CQ8N5M4 171 aa14.36□□□□□ -0.11
SSC4D-201ENST00000275560 AGPAT4-IT1Q9H0P7 198 aa14.36□□□□□ -0.11
SSC4D-201ENST00000275560 DEFB104AQ8WTQ1 72 aa14.36□□□□□ -0.11
SSC4D-201ENST00000275560 TMEM190Q8WZ59 177 aa14.35□□□□□ -0.11
SSC4D-201ENST00000275560 SPTA1P02549 2419 aa14.35□□□□□ -0.11
SSC4D-201ENST00000275560 A0A087WX48 190 aa14.35□□□□□ -0.11
SSC4D-201ENST00000275560 GAGE13Q4V321 117 aa14.35□□□□□ -0.11
SSC4D-201ENST00000275560 SMPXQ9UHP9 88 aa14.35□□□□□ -0.11
SSC4D-201ENST00000275560 ZNF672Q499Z4 452 aaPredicted RBP14.34□□□□□ -0.11
SSC4D-201ENST00000275560 Q5PR19 223 aa14.34□□□□□ -0.11
SSC4D-201ENST00000275560 IGHV7-4-1A0A0J9YVY3 117 aa14.34□□□□□ -0.11
SSC4D-201ENST00000275560 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.34□□□□□ -0.11
SSC4D-201ENST00000275560 RRN3P1Q2M238 152 aa14.33□□□□□ -0.11
SSC4D-201ENST00000275560 CLUHP3Q96NS8 147 aa14.33□□□□□ -0.11
SSC4D-201ENST00000275560 PRO0461Q9UI25 63 aa14.33□□□□□ -0.11
SSC4D-201ENST00000275560 TRBV7-3A0A075B6L6 115 aa14.33□□□□□ -0.12
SSC4D-201ENST00000275560 B9A039 149 aa14.33□□□□□ -0.12
SSC4D-201ENST00000275560 GRNP28799 593 aaKnown RBP14.33□□□□□ -0.12
SSC4D-201ENST00000275560 C20orf78Q9BR46 151 aa14.33□□□□□ -0.12
SSC4D-201ENST00000275560 H3BVH4 76 aa14.33□□□□□ -0.12
SSC4D-201ENST00000275560 SPANXN1Q5VSR9 72 aa14.33□□□□□ -0.12
SSC4D-201ENST00000275560 CEP295Q9C0D2 2601 aa14.32□□□□□ -0.12
SSC4D-201ENST00000275560 A0A1B0GWB2 263 aa14.32□□□□□ -0.12
SSC4D-201ENST00000275560 IGF1P05019 195 aa14.32□□□□□ -0.12
SSC4D-201ENST00000275560 CLEC3BP05452 202 aa14.32□□□□□ -0.12
SSC4D-201ENST00000275560 ECSCRQ19T08 205 aa14.32□□□□□ -0.12
SSC4D-201ENST00000275560 C15orf32Q32M92 178 aa14.32□□□□□ -0.12
SSC4D-201ENST00000275560 ZNF48Q96MX3 618 aaPredicted RBP14.32□□□□□ -0.12
SSC4D-201ENST00000275560 CD3EP07766 207 aa14.32□□□□□ -0.12
SSC4D-201ENST00000275560 SRSF1Q07955 248 aaKnown RBP eCLIP14.32□□□□□ -0.123e-6■□□□□ 11.2
SSC4D-201ENST00000275560 BUB3O43684 328 aa14.31□□□□□ -0.12
SSC4D-201ENST00000275560 SRSF2Q01130 221 aaKnown RBP14.31□□□□□ -0.12
SSC4D-201ENST00000275560 MSRB2Q9Y3D2 182 aa14.31□□□□□ -0.12
SSC4D-201ENST00000275560 MORN3Q6PF18 240 aaPredicted RBP14.31□□□□□ -0.12
SSC4D-201ENST00000275560 AKAP6Q13023 2319 aa14.3□□□□□ -0.12
SSC4D-201ENST00000275560 VPS13CQ709C8 3753 aa14.3□□□□□ -0.12
SSC4D-201ENST00000275560 PRR9Q5T870 116 aa14.3□□□□□ -0.12
SSC4D-201ENST00000275560 OR11H6Q8NGC7 330 aa14.3□□□□□ -0.12
SSC4D-201ENST00000275560 SPATA25Q9BR10 227 aa14.3□□□□□ -0.12
SSC4D-201ENST00000275560 IGHV7-81A0A0B4J1V7 117 aa14.3□□□□□ -0.12
SSC4D-201ENST00000275560 LY6G5BQ8NDX9 201 aa14.3□□□□□ -0.12
SSC4D-201ENST00000275560 DEFB1P60022 68 aa14.29□□□□□ -0.12
SSC4D-201ENST00000275560 RPL39LQ96EH5 51 aaKnown RBP14.29□□□□□ -0.12
SSC4D-201ENST00000275560 ATP6V0BQ99437 205 aa14.29□□□□□ -0.12
SSC4D-201ENST00000275560 ZFAND3Q9H8U3 227 aa14.29□□□□□ -0.12
SSC4D-201ENST00000275560 PGPEP1Q9NXJ5 209 aa14.29□□□□□ -0.12
SSC4D-201ENST00000275560 TRAV8-2A0A0B4J237 113 aa14.29□□□□□ -0.12
SSC4D-201ENST00000275560 OR11H12B2RN74 326 aa14.29□□□□□ -0.12
SSC4D-201ENST00000275560 J3QR89 54 aa14.29□□□□□ -0.12
SSC4D-201ENST00000275560 Q8NA96 180 aa14.29□□□□□ -0.12
SSC4D-201ENST00000275560 OR11H1Q8NG94 326 aa14.29□□□□□ -0.12
SSC4D-201ENST00000275560 OR11H2Q8NH07 326 aa14.29□□□□□ -0.12
SSC4D-201ENST00000275560 MYMXA0A1B0GTQ4 84 aa14.28□□□□□ -0.12
SSC4D-201ENST00000275560 LINC01548A6NM66 108 aa14.28□□□□□ -0.12
SSC4D-201ENST00000275560 PSMG4Q5JS54 123 aa14.28□□□□□ -0.12
SSC4D-201ENST00000275560 CLEC19AQ6UXS0 136 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms