RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 BAGE2Q86Y30 109 aa12.55□□□□□ -0.4
SKP2-201ENST00000274254 TMEM183AQ8IXX5 376 aa12.55□□□□□ -0.4
SKP2-201ENST00000274254 C9JCJ5 164 aa12.54□□□□□ -0.4
SKP2-201ENST00000274254 J3KRW8 73 aa12.54□□□□□ -0.4
SKP2-201ENST00000274254 ZNF674Q2M3X9 581 aa12.54□□□□□ -0.4
SKP2-201ENST00000274254 Q6ZWC4 215 aa12.54□□□□□ -0.4
SKP2-201ENST00000274254 SMIM12Q96EX1 92 aa12.54□□□□□ -0.4
SKP2-201ENST00000274254 C7orf71A4D174 169 aa12.53□□□□□ -0.4
SKP2-201ENST00000274254 IGLV2-8P01709 118 aa12.53□□□□□ -0.4
SKP2-201ENST00000274254 RBMY1A1P0DJD3 496 aaKnown RBP12.53□□□□□ -0.4
SKP2-201ENST00000274254 RBMY1CP0DJD4 496 aa12.53□□□□□ -0.4
SKP2-201ENST00000274254 GNG4P50150 75 aa12.53□□□□□ -0.4
SKP2-201ENST00000274254 BTN1A1Q13410 526 aa12.53□□□□□ -0.4
SKP2-201ENST00000274254 RBMY1FQ15415 496 aaKnown RBP12.53□□□□□ -0.4
SKP2-201ENST00000274254 SMUG1Q53HV7 270 aa12.53□□□□□ -0.4
SKP2-201ENST00000274254 SBSPONQ8IVN8 264 aa12.53□□□□□ -0.4
SKP2-201ENST00000274254 SMIM7Q9BQ49 75 aa12.53□□□□□ -0.4
SKP2-201ENST00000274254 ZNF324O75467 553 aaPredicted RBP12.52□□□□□ -0.4
SKP2-201ENST00000274254 INSP01308 110 aa12.52□□□□□ -0.4
SKP2-201ENST00000274254 RNASE4P34096 147 aaKnown RBP12.52□□□□□ -0.4
SKP2-201ENST00000274254 Q6AWC8 147 aa12.52□□□□□ -0.4
SKP2-201ENST00000274254 NHLRC2Q8NBF2 726 aa12.52□□□□□ -0.4
SKP2-201ENST00000274254 ZC2HC1AQ96GY0 325 aa12.52□□□□□ -0.4
SKP2-201ENST00000274254 C20orf144Q9BQM9 153 aa12.52□□□□□ -0.4
SKP2-201ENST00000274254 ZNF727A8MUV8 499 aa12.52□□□□□ -0.41
SKP2-201ENST00000274254 SFTA3P0C7M3 94 aa12.52□□□□□ -0.41
SKP2-201ENST00000274254 ZNF80P51504 273 aaPredicted RBP12.52□□□□□ -0.41
SKP2-201ENST00000274254 DEFB135Q30KP9 77 aa12.52□□□□□ -0.41
SKP2-201ENST00000274254 FAM74A3Q4VXF1 159 aa12.52□□□□□ -0.41
SKP2-201ENST00000274254 SOHLH1Q5JUK2 328 aa12.52□□□□□ -0.41
SKP2-201ENST00000274254 C1orf158Q8N1D5 194 aa12.52□□□□□ -0.41
SKP2-201ENST00000274254 TRAV12-3A0A0B4J271 114 aa12.51□□□□□ -0.41
SKP2-201ENST00000274254 PGPEP1LA6NFU8 196 aa12.51□□□□□ -0.41
SKP2-201ENST00000274254 GCGP01275 180 aa12.51□□□□□ -0.41
SKP2-201ENST00000274254 ZNF705AQ6ZN79 300 aaPredicted RBP12.51□□□□□ -0.41
SKP2-201ENST00000274254 Q6ZQT7 251 aa12.51□□□□□ -0.41
SKP2-201ENST00000274254 B9D2Q9BPU9 175 aa12.51□□□□□ -0.41
SKP2-201ENST00000274254 NBEAL2Q6ZNJ1 2754 aa12.5□□□□□ -0.41
SKP2-201ENST00000274254 PFN1P07737 140 aaKnown RBP12.5□□□□□ -0.41
SKP2-201ENST00000274254 CRIP1P50238 77 aa12.5□□□□□ -0.41
SKP2-201ENST00000274254 OCC1Q8TAD7 63 aa12.5□□□□□ -0.41
SKP2-201ENST00000274254 RNF183Q96D59 192 aa12.5□□□□□ -0.41
SKP2-201ENST00000274254 LY96Q9Y6Y9 160 aa12.5□□□□□ -0.41
SKP2-201ENST00000274254 TMEM218A2RU14 115 aa12.49□□□□□ -0.41
SKP2-201ENST00000274254 TMEM256Q8N2U0 113 aa12.49□□□□□ -0.41
SKP2-201ENST00000274254 RCHY1Q96PM5 261 aa12.49□□□□□ -0.41
SKP2-201ENST00000274254 TM2D3Q9BRN9 247 aa12.49□□□□□ -0.41
SKP2-201ENST00000274254 NIPSNAP3BQ9BS92 247 aa12.49□□□□□ -0.41
SKP2-201ENST00000274254 TP53TG1Q9Y2A0 90 aa12.49□□□□□ -0.41
SKP2-201ENST00000274254 GOLT1BQ9Y3E0 138 aa12.49□□□□□ -0.41
SKP2-201ENST00000274254 PRKDCP78527 4128 aaKnown RBP12.48□□□□□ -0.41
SKP2-201ENST00000274254 TRAV21A0A0B4J279 112 aa12.48□□□□□ -0.41
SKP2-201ENST00000274254 FABP5P3A8MUU1 101 aa12.47□□□□□ -0.41
SKP2-201ENST00000274254 H7BYZ3 331 aa12.47□□□□□ -0.41
SKP2-201ENST00000274254 K7EN84 100 aa12.47□□□□□ -0.41
SKP2-201ENST00000274254 SPRY2O43597 315 aa12.47□□□□□ -0.41
SKP2-201ENST00000274254 TMEM241Q24JQ0 296 aa12.47□□□□□ -0.41
SKP2-201ENST00000274254 FAM162BQ5T6X4 162 aa12.47□□□□□ -0.41
SKP2-201ENST00000274254 LINC01551Q86U37 167 aa12.47□□□□□ -0.41
SKP2-201ENST00000274254 OVOL2Q9BRP0 275 aa12.47□□□□□ -0.41
SKP2-201ENST00000274254 FBN3Q75N90 2809 aa12.47□□□□□ -0.41
SKP2-201ENST00000274254 MGST1P10620 155 aaKnown RBP12.47□□□□□ -0.41
SKP2-201ENST00000274254 ADCYAP1P18509 176 aa12.47□□□□□ -0.41
SKP2-201ENST00000274254 NDUFA5Q16718 116 aa12.47□□□□□ -0.41
SKP2-201ENST00000274254 PYGO2Q9BRQ0 406 aa12.47□□□□□ -0.41
SKP2-201ENST00000274254 TMEM208Q9BTX3 173 aa12.47□□□□□ -0.41
SKP2-201ENST00000274254 NAT8Q9UHE5 227 aa12.47□□□□□ -0.41
SKP2-201ENST00000274254 IGHV3OR16-12A0A075B7B8 117 aa12.46□□□□□ -0.42
SKP2-201ENST00000274254 SH2D1AO60880 128 aa12.46□□□□□ -0.42
SKP2-201ENST00000274254 SLC7A5P1Q8MH63 180 aa12.46□□□□□ -0.42
SKP2-201ENST00000274254 LINC01587Q99440 93 aa12.46□□□□□ -0.42
SKP2-201ENST00000274254 SPATA25Q9BR10 227 aa12.46□□□□□ -0.42
SKP2-201ENST00000274254 LINC00467Q9BRT7 94 aa12.46□□□□□ -0.42
SKP2-201ENST00000274254 RETNQ9HD89 108 aa12.46□□□□□ -0.42
SKP2-201ENST00000274254 BIN3Q9NQY0 253 aa12.46□□□□□ -0.42
SKP2-201ENST00000274254 C11orf21Q9P2W6 132 aa12.46□□□□□ -0.42
SKP2-201ENST00000274254 X6R8D5 127 aa12.46□□□□□ -0.42
SKP2-201ENST00000274254 OR5I1Q13606 314 aa12.45□□□□□ -0.42
SKP2-201ENST00000274254 TDRG1Q3Y452 100 aa12.45□□□□□ -0.42
SKP2-201ENST00000274254 PRR27Q6MZM9 219 aa12.45□□□□□ -0.42
SKP2-201ENST00000274254 OR11H2Q8NH07 326 aa12.45□□□□□ -0.42
SKP2-201ENST00000274254 NEU1Q99519 415 aa12.45□□□□□ -0.42
SKP2-201ENST00000274254 SDF2L1Q9HCN8 221 aa12.45□□□□□ -0.42
SKP2-201ENST00000274254 C19orf71A6NCJ1 209 aa12.44□□□□□ -0.42
SKP2-201ENST00000274254 RPL23P62829 140 aaKnown RBP12.44□□□□□ -0.42
SKP2-201ENST00000274254 SEC11CQ9BY50 192 aa12.44□□□□□ -0.42
SKP2-201ENST00000274254 IGHV1OR15-1A0A075B7D0 117 aa12.43□□□□□ -0.42
SKP2-201ENST00000274254 F8W036 122 aa12.43□□□□□ -0.42
SKP2-201ENST00000274254 PRM2P04554 102 aa12.43□□□□□ -0.42
SKP2-201ENST00000274254 MUC21Q5SSG8 566 aa12.43□□□□□ -0.42
SKP2-201ENST00000274254 TENM3Q9P273 2699 aa12.43□□□□□ -0.42
SKP2-201ENST00000274254 IGKV3D-20A0A0C4DH25 116 aa12.42□□□□□ -0.42
SKP2-201ENST00000274254 SMIM9A6NGZ8 99 aa12.42□□□□□ -0.42
SKP2-201ENST00000274254 ZNF705GA8MUZ8 300 aaPredicted RBP12.42□□□□□ -0.42
SKP2-201ENST00000274254 ANXA2RQ3ZCQ2 193 aa12.42□□□□□ -0.42
SKP2-201ENST00000274254 C10orf91Q5T1B1 145 aa12.42□□□□□ -0.42
SKP2-201ENST00000274254 FAM159AQ6UWV7 190 aa12.42□□□□□ -0.42
SKP2-201ENST00000274254 NAGKQ9UJ70 344 aa12.42□□□□□ -0.42
SKP2-201ENST00000274254 DNAH9Q9NYC9 4486 aa12.42□□□□□ -0.42
SKP2-201ENST00000274254 LINC01559Q495D7 138 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms