RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 C22orf34Q6ZV56 151 aa10.05□□□□□ -0.8
HERC6-202ENST00000273960 TMEM200BQ69YZ2 307 aa10.04□□□□□ -0.8
HERC6-202ENST00000273960 SEM1Q6ZVN7 128 aa10.04□□□□□ -0.8
HERC6-202ENST00000273960 PRO0461Q9UI25 63 aa10.04□□□□□ -0.8
HERC6-202ENST00000273960 LINC00312Q9Y6C7 94 aa10.04□□□□□ -0.8
HERC6-202ENST00000273960 IGHV3-49A0A0A0MS15 119 aa10.04□□□□□ -0.8
HERC6-202ENST00000273960 OR11H12B2RN74 326 aa10.04□□□□□ -0.8
HERC6-202ENST00000273960 LYPD2Q6UXB3 125 aa10.04□□□□□ -0.8
HERC6-202ENST00000273960 SIGLEC15Q6ZMC9 328 aa10.04□□□□□ -0.8
HERC6-202ENST00000273960 OR11H1Q8NG94 326 aa10.04□□□□□ -0.8
HERC6-202ENST00000273960 OR11H2Q8NH07 326 aa10.04□□□□□ -0.8
HERC6-202ENST00000273960 TM2D2Q9BX73 214 aa10.04□□□□□ -0.8
HERC6-202ENST00000273960 C1QTNF4Q9BXJ3 329 aa10.04□□□□□ -0.8
HERC6-202ENST00000273960 FAM215AQ9Y5M1 114 aa10.04□□□□□ -0.8
HERC6-202ENST00000273960 TRGV3P03979 118 aa10.03□□□□□ -0.8
HERC6-202ENST00000273960 ACACBO00763 2458 aa10.03□□□□□ -0.8
HERC6-202ENST00000273960 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.03□□□□□ -0.8
HERC6-202ENST00000273960 IGLV2-23P01705 113 aa10.03□□□□□ -0.8
HERC6-202ENST00000273960 BEX4Q9NWD9 120 aaPredicted RBP10.03□□□□□ -0.8
HERC6-202ENST00000273960 IGKV1-17P01599 117 aa10.02□□□□□ -0.8
HERC6-202ENST00000273960 ATP5IP56385 69 aaPredicted RBP10.02□□□□□ -0.8
HERC6-202ENST00000273960 ZNF833PQ6ZTB9 187 aa10.02□□□□□ -0.8
HERC6-202ENST00000273960 TEX29Q8N6K0 151 aa10.02□□□□□ -0.8
HERC6-202ENST00000273960 LRBAP50851 2863 aa10.02□□□□□ -0.8
HERC6-202ENST00000273960 IGHV1-46P01743 117 aa10.02□□□□□ -0.81
HERC6-202ENST00000273960 Q6ZQT7 251 aa10.02□□□□□ -0.81
HERC6-202ENST00000273960 HIF1ANQ9NWT6 349 aa10.02□□□□□ -0.81
HERC6-202ENST00000273960 MORN3Q6PF18 240 aaPredicted RBP10.02□□□□□ -0.81
HERC6-202ENST00000273960 DLX4Q92988 240 aaPredicted RBP10.02□□□□□ -0.81
HERC6-202ENST00000273960 RAX2Q96IS3 184 aa10.02□□□□□ -0.81
HERC6-202ENST00000273960 SLC25A15Q9Y619 301 aa10.02□□□□□ -0.81
HERC6-202ENST00000273960 TRAV8-2A0A0B4J237 113 aa10.01□□□□□ -0.81
HERC6-202ENST00000273960 HIGD1BQ9P298 99 aa10.01□□□□□ -0.81
HERC6-202ENST00000273960 ZNF815PA8K554 130 aa10.01□□□□□ -0.81
HERC6-202ENST00000273960 CD40P25942 277 aa10.01□□□□□ -0.81
HERC6-202ENST00000273960 ZFAND6Q6FIF0 208 aa10.01□□□□□ -0.81
HERC6-202ENST00000273960 PLEKHB2Q96CS7 222 aa10.01□□□□□ -0.81
HERC6-202ENST00000273960 CARD19Q96LW7 228 aa10.01□□□□□ -0.81
HERC6-202ENST00000273960 CREBBPQ92793 2442 aa10.01□□□□□ -0.81
HERC6-202ENST00000273960 DTX2Q86UW9 622 aa10.01□□□□□ -0.81
HERC6-202ENST00000273960 RNF182Q8N6D2 247 aa10.01□□□□□ -0.81
HERC6-202ENST00000273960 RNF125Q96EQ8 232 aa10.01□□□□□ -0.81
HERC6-202ENST00000273960 A0A1B0GW15 77 aa10□□□□□ -0.81
HERC6-202ENST00000273960 CCDC179H3BU77 68 aa10□□□□□ -0.81
HERC6-202ENST00000273960 ZNF493Q6ZR52 646 aa10□□□□□ -0.81
HERC6-202ENST00000273960 Q6ZS92 163 aa10□□□□□ -0.81
HERC6-202ENST00000273960 ERG28Q9UKR5 140 aa10□□□□□ -0.81
HERC6-202ENST00000273960 RAXQ9Y2V3 346 aa10□□□□□ -0.81
HERC6-202ENST00000273960 LHBP01229 141 aa10□□□□□ -0.81
HERC6-202ENST00000273960 CFAP161Q6P656 301 aa10□□□□□ -0.81
HERC6-202ENST00000273960 LINC01560Q8TB33 94 aa10□□□□□ -0.81
HERC6-202ENST00000273960 RNF185Q96GF1 192 aa10□□□□□ -0.81
HERC6-202ENST00000273960 NOTCH3Q9UM47 2321 aa10□□□□□ -0.81
HERC6-202ENST00000273960 RAI1Q7Z5J4 1906 aaPredicted RBP10□□□□□ -0.81
HERC6-202ENST00000273960 LYNX1G3V0Z9 82 aa9.99□□□□□ -0.81
HERC6-202ENST00000273960 LYNX1P0DP58 116 aa9.99□□□□□ -0.81
HERC6-202ENST00000273960 SLC25A16P16260 332 aa9.99□□□□□ -0.81
HERC6-202ENST00000273960 PAX8Q06710 450 aa9.99□□□□□ -0.81
HERC6-202ENST00000273960 BSPH1Q075Z2 132 aa9.99□□□□□ -0.81
HERC6-202ENST00000273960 GAGE5Q13069 117 aa9.99□□□□□ -0.81
HERC6-202ENST00000273960 GAGE6Q13070 117 aa9.99□□□□□ -0.81
HERC6-202ENST00000273960 KLRD1Q13241 179 aa9.99□□□□□ -0.81
HERC6-202ENST00000273960 Q6AWC8 147 aa9.99□□□□□ -0.81
HERC6-202ENST00000273960 ONECUT1Q9UBC0 465 aa9.99□□□□□ -0.81
HERC6-202ENST00000273960 RPL7P18124 248 aaKnown RBP9.99□□□□□ -0.81
HERC6-202ENST00000273960 TMEM78Q5T7P6 136 aa9.99□□□□□ -0.81
HERC6-202ENST00000273960 CFAP126Q5VTH2 177 aa9.99□□□□□ -0.81
HERC6-202ENST00000273960 A0A0G2JNJ9 132 aa9.98□□□□□ -0.81
HERC6-202ENST00000273960 PRR25Q96S07 402 aa9.98□□□□□ -0.81
HERC6-202ENST00000273960 SHANK2-AS3Q9BTD1 123 aa9.98□□□□□ -0.81
HERC6-202ENST00000273960 Q9UFV3 132 aa9.98□□□□□ -0.81
HERC6-202ENST00000273960 U3KQK5 164 aa9.98□□□□□ -0.81
HERC6-202ENST00000273960 GLRXP35754 106 aa9.98□□□□□ -0.81
HERC6-202ENST00000273960 HES1Q14469 280 aa9.98□□□□□ -0.81
HERC6-202ENST00000273960 MYMXA0A1B0GTQ4 84 aa9.98□□□□□ -0.81
HERC6-202ENST00000273960 MBD3L4A6NDZ8 208 aaPredicted RBP9.98□□□□□ -0.81
HERC6-202ENST00000273960 MBD3L3A6NE82 208 aaPredicted RBP9.98□□□□□ -0.81
HERC6-202ENST00000273960 MBD3L5A6NJ08 208 aaPredicted RBP9.98□□□□□ -0.81
HERC6-202ENST00000273960 FCN3O75636 299 aa9.98□□□□□ -0.81
HERC6-202ENST00000273960 ANKRD29Q8N6D5 301 aa9.98□□□□□ -0.81
HERC6-202ENST00000273960 MBD3L2Q8NHZ7 208 aaPredicted RBP9.98□□□□□ -0.81
HERC6-202ENST00000273960 FAM57AQ8TBR7 257 aa9.98□□□□□ -0.81
HERC6-202ENST00000273960 AJUBAQ96IF1 538 aa9.98□□□□□ -0.81
HERC6-202ENST00000273960 ATP5LO75964 103 aa9.97□□□□□ -0.81
HERC6-202ENST00000273960 TSPAN13O95857 204 aa9.97□□□□□ -0.81
HERC6-202ENST00000273960 TCL1BO95988 128 aa9.97□□□□□ -0.81
HERC6-202ENST00000273960 CRYGCP07315 174 aa9.97□□□□□ -0.81
HERC6-202ENST00000273960 PPP1R27Q86WC6 154 aa9.97□□□□□ -0.81
HERC6-202ENST00000273960 SCGB3A1Q96QR1 104 aa9.97□□□□□ -0.81
HERC6-202ENST00000273960 PRADC1Q9BSG0 188 aa9.97□□□□□ -0.81
HERC6-202ENST00000273960 NXT2Q9NPJ8 142 aaKnown RBP9.97□□□□□ -0.81
HERC6-202ENST00000273960 PRAC2D3DTV9 90 aa9.97□□□□□ -0.81
HERC6-202ENST00000273960 ZNF491Q8N8L2 437 aa9.97□□□□□ -0.81
HERC6-202ENST00000273960 C1orf162Q8NEQ5 155 aaPredicted RBP9.97□□□□□ -0.81
HERC6-202ENST00000273960 SIGLEC9Q9Y336 463 aa9.97□□□□□ -0.81
HERC6-202ENST00000273960 IGHV3-64A0A075B6Q5 118 aa9.97□□□□□ -0.81
HERC6-202ENST00000273960 VSTM5A8MXK1 200 aa9.97□□□□□ -0.81
HERC6-202ENST00000273960 C9JAW5 83 aa9.97□□□□□ -0.81
HERC6-202ENST00000273960 TTC32Q5I0X7 151 aa9.97□□□□□ -0.81
HERC6-202ENST00000273960 SPANXN1Q5VSR9 72 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms