RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 TRAV6A0A075B6T7 132 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 A0A087WTM6 91 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 FAM25EA8MYX2 175 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 EPM2AB3EWF7 344 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 L7N2F9 121 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 LYRM1O43325 122 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 TCRBP04435 133 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 FGF7P21781 194 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 SULT1A1P50225 295 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 VAMP2P63027 116 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 HAMPP81172 84 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 BAXQ07812 192 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 PDE6HQ13956 83 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 ICAM4Q14773 271 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 Q6ZRG5 221 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 MIR17HGQ75NE6 70 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 WFDC10BQ8IUB3 73 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 BLNKQ8WV28 456 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 PHYHIPLQ96FC7 376 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 C2orf50Q96LR7 162 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 LINC00477Q96M19 166 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 C8orf49Q96NF6 230 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 PFDN5Q99471 154 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 NPCDR1Q9BY65 106 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 ZNF492Q9P255 531 aa6.05□□□□□ -1.44
TPM3-201ENST00000271850 LRP1Q07954 4544 aaKnown RBP6.04□□□□□ -1.44
TPM3-201ENST00000271850 IGHV1OR15-1A0A075B7D0 117 aa6.04□□□□□ -1.44
TPM3-201ENST00000271850 K7EQD1 137 aa6.04□□□□□ -1.44
TPM3-201ENST00000271850 PRAF2O60831 178 aa6.04□□□□□ -1.44
TPM3-201ENST00000271850 MPDU1O75352 247 aa6.04□□□□□ -1.44
TPM3-201ENST00000271850 SFTA3P0C7M3 94 aa6.04□□□□□ -1.44
TPM3-201ENST00000271850 INPP1P49441 399 aa6.04□□□□□ -1.44
TPM3-201ENST00000271850 Q5VSD8 79 aa6.04□□□□□ -1.44
TPM3-201ENST00000271850 FAM122CQ6P4D5 195 aa6.04□□□□□ -1.44
TPM3-201ENST00000271850 THAP6Q8TBB0 222 aa6.04□□□□□ -1.44
TPM3-201ENST00000271850 FXYD5Q96DB9 178 aa6.04□□□□□ -1.44
TPM3-201ENST00000271850 ZNF479Q96JC4 524 aa6.04□□□□□ -1.44
TPM3-201ENST00000271850 NUDT15Q9NV35 164 aa6.04□□□□□ -1.44
TPM3-201ENST00000271850 MDFICQ9P1T7 246 aa6.04□□□□□ -1.44
TPM3-201ENST00000271850 ICOSQ9Y6W8 199 aa6.04□□□□□ -1.44
TPM3-201ENST00000271850 C5orf51A6NDU8 294 aa6.03□□□□□ -1.44
TPM3-201ENST00000271850 H0YIZ8 118 aa6.03□□□□□ -1.44
TPM3-201ENST00000271850 EIF3GO75821 320 aaKnown RBP eCLIP6.03□□□□□ -1.44
TPM3-201ENST00000271850 GPX1P07203 203 aa6.03□□□□□ -1.44
TPM3-201ENST00000271850 NMBP08949 121 aa6.03□□□□□ -1.44
TPM3-201ENST00000271850 INAFM2P0DMQ5 153 aa6.03□□□□□ -1.44
TPM3-201ENST00000271850 S100A11P31949 105 aa6.03□□□□□ -1.44
TPM3-201ENST00000271850 S100A10P60903 97 aa6.03□□□□□ -1.44
TPM3-201ENST00000271850 NHLH2Q02577 135 aa6.03□□□□□ -1.44
TPM3-201ENST00000271850 C12orf45Q8N5I9 185 aaPredicted RBP6.03□□□□□ -1.44
TPM3-201ENST00000271850 PRO0255Q9UI72 69 aa6.03□□□□□ -1.44
TPM3-201ENST00000271850 PRELID1Q9Y255 219 aa6.03□□□□□ -1.44
TPM3-201ENST00000271850 LOC100131303A0A0U1RQF7 123 aa6.02□□□□□ -1.45
TPM3-201ENST00000271850 CENPXA8MT69 81 aa6.02□□□□□ -1.45
TPM3-201ENST00000271850 RGS13O14921 159 aa6.02□□□□□ -1.45
TPM3-201ENST00000271850 SMR3BP02814 79 aaPredicted RBP6.02□□□□□ -1.45
TPM3-201ENST00000271850 OR10J4P0C629 311 aa6.02□□□□□ -1.45
TPM3-201ENST00000271850 RAB31Q13636 194 aa6.02□□□□□ -1.45
TPM3-201ENST00000271850 MUC21Q5SSG8 566 aa6.02□□□□□ -1.45
TPM3-201ENST00000271850 MRPL32Q9BYC8 188 aaKnown RBP6.02□□□□□ -1.45
TPM3-201ENST00000271850 OR5AC2Q9NZP5 309 aa6.02□□□□□ -1.45
TPM3-201ENST00000271850 HHLA3Q9XRX5 114 aa6.02□□□□□ -1.45
TPM3-201ENST00000271850 TIMM9Q9Y5J7 89 aa6.02□□□□□ -1.45
TPM3-201ENST00000271850 LRCOL1A6NCL2 159 aa6.01□□□□□ -1.45
TPM3-201ENST00000271850 E5RGE8 158 aa6.01□□□□□ -1.45
TPM3-201ENST00000271850 SIX6O95475 246 aa6.01□□□□□ -1.45
TPM3-201ENST00000271850 NBEAP1P0C6P0 100 aa6.01□□□□□ -1.45
TPM3-201ENST00000271850 ZNF138P52744 262 aa6.01□□□□□ -1.45
TPM3-201ENST00000271850 ERVFC1-1P60608 527 aa6.01□□□□□ -1.45
TPM3-201ENST00000271850 ZNF266Q14584 549 aa6.01□□□□□ -1.45
TPM3-201ENST00000271850 ZNF846Q147U1 533 aa6.01□□□□□ -1.45
TPM3-201ENST00000271850 CNPY1Q3B7I2 92 aa6.01□□□□□ -1.45
TPM3-201ENST00000271850 Q6AWC8 147 aa6.01□□□□□ -1.45
TPM3-201ENST00000271850 OR10G4Q8NGN3 311 aa6.01□□□□□ -1.45
TPM3-201ENST00000271850 OR5C1Q8NGR4 320 aa6.01□□□□□ -1.45
TPM3-201ENST00000271850 RASL10AQ92737 203 aa6.01□□□□□ -1.45
TPM3-201ENST00000271850 TVP23CQ96ET8 276 aa6.01□□□□□ -1.45
TPM3-201ENST00000271850 OR51M1Q9H341 326 aa6.01□□□□□ -1.45
TPM3-201ENST00000271850 GPN1Q9HCN4 374 aaPredicted RBP6.01□□□□□ -1.45
TPM3-201ENST00000271850 FAT3Q8TDW7 4589 aa6□□□□□ -1.45
TPM3-201ENST00000271850 TRBV7-9A0A0J9YWB2 115 aa6□□□□□ -1.45
TPM3-201ENST00000271850 GYPEP15421 78 aa6□□□□□ -1.45
TPM3-201ENST00000271850 ZNF415Q09FC8 603 aa6□□□□□ -1.45
TPM3-201ENST00000271850 MRPL23Q16540 153 aaKnown RBP6□□□□□ -1.45
TPM3-201ENST00000271850 ATP6V1FQ16864 119 aa6□□□□□ -1.45
TPM3-201ENST00000271850 TMEM78Q5T7P6 136 aa6□□□□□ -1.45
TPM3-201ENST00000271850 NEGR1Q7Z3B1 354 aa6□□□□□ -1.45
TPM3-201ENST00000271850 STX12Q86Y82 276 aa6□□□□□ -1.45
TPM3-201ENST00000271850 IQCF2Q8IXL9 164 aa6□□□□□ -1.45
TPM3-201ENST00000271850 ARPC5LQ9BPX5 153 aa6□□□□□ -1.45
TPM3-201ENST00000271850 PAXXQ9BUH6 204 aa6□□□□□ -1.45
TPM3-201ENST00000271850 WDR61Q9GZS3 305 aaKnown RBP6□□□□□ -1.45
TPM3-201ENST00000271850 MSRB1Q9NZV6 116 aa6□□□□□ -1.45
TPM3-201ENST00000271850 FAM30AQ9NZY2 134 aa6□□□□□ -1.45
TPM3-201ENST00000271850 LY96Q9Y6Y9 160 aa6□□□□□ -1.45
TPM3-201ENST00000271850 DIRC3C9JPN6 131 aa5.99□□□□□ -1.45
TPM3-201ENST00000271850 GNRH2O43555 120 aa5.99□□□□□ -1.45
TPM3-201ENST00000271850 PVALBP20472 110 aaPredicted RBP5.99□□□□□ -1.45
TPM3-201ENST00000271850 HBG1P69891 147 aa5.99□□□□□ -1.45
TPM3-201ENST00000271850 HBG2P69892 147 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms